FC923273

Overview
NameFC923273
Unique NameFC923273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37
Identity = 79/201 (39.30%), Postives = 124/201 (61.69%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV---QSRSKRHTMCGTLDYLAPEMVENKEHDYAV-DNWTLGILCYEFLYGAPPFE 682
            +E+GR +G+G F +V   +  ++   VA+KI+ +  I K K+  Q++RE+ I   +RHP ++RLY       +I++ILEY   GEL+ ++ ++ R +E +A  Y   L + + YCH   V HRD+KPENLLLD +G LKI DFG S    Q  +   T CGT +Y+APE++ +K ++ AV D W+ G++ Y  + G  PF+
Sbjct:    9 YELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQGVTILKTTCGTPNYVAPEVLSHKGYNGAVADIWSCGVILYVLMAGYLPFD 209          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PK2_DICDI (Protein kinase 2 OS=Dictyostelium discoideum GN=pkgB PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37
Identity = 77/213 (36.15%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   68 KREWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS--VQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKT 700
            K+  +  DFE+   +GKG FG+V  V++       A+K++ K+ I   K  +  + E  I   + HP I+ L+  F   ++++++L++ + GEL+  L++  RF+E +   Y A + +AL + H+  +++RD+KPEN+LLD EG + I DFG S  +++     T CGT +YLAPE++    H  AVD W+LG L YE L G PPF +++  T
Sbjct:  145 KQSATKDDFELLNVIGKGSFGKVMQVKKKGEDKIFAMKVLRKDAIIARKQVNHTKSEKTILQCISHPFIVNLHYAFQTKDKLYMVLDFVNGGELFFHLKREGRFSEPRVKIYAAEIVSALDHLHKQDIVYRDLKPENILLDSEGHICITDFGLSKKIETTDGTFTFCGTPEYLAPEVLNGHGHGCAVDWWSLGTLLYEMLTGLPPFYSQNVST 357          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KAPCA_CRIGR (cAMP-dependent protein kinase catalytic subunit alpha OS=Cricetulus griseus GN=PRKACA PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37
Identity = 78/203 (38.42%), Postives = 127/203 (62.56%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYK-IQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE 688
            L  F+  + LG G FGRV LV+  ++    A+KI+ K+++ K K I+H L  E  I  ++  P +++L   F D+  +++++EY   GE++  LR+  RF+E  A  Y A +     Y H   +I+RD+KPENLL+D +G +++ DFG++ + + +  T+CGT +YLAPE++ +K ++ AVD W LG+L YE   G PPF A+
Sbjct:   41 LDHFDRIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKG_ARATH (CBL-interacting serine/threonine-protein kinase 16 OS=Arabidopsis thaliana GN=CIPK16 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37
Identity = 88/229 (38.43%), Postives = 124/229 (54.15%), Query Frame = 2
Query:   56 EDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYK-IQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSV------------QSRSKRHTMCGTLDYLAPEMVENKEHDYAV-DNWTLGILCYEFLYGAPPFEAESQKT 700
            E NR        + IGR LG G F +VY   E+ +   VA+K+I K+ + K + +  Q+ RE+ +   LRHPN++ L       ++IF ++EY + GEL+  + +  +  E  A  Y   L +A+ +CH   V HRDIKPENLLLD EG LK+ DFG S              S    HT CGT  Y+APE++ NK +D A+ D W+ GI+ Y  L G  PF  E+  T
Sbjct:    3 ESNRSSTVLFDKYNIGRLLGTGNFAKVYHGTEISTGDDVAIKVIKKDHVFKRRGMMEQIEREIAVMRLLRHPNVVELREVMATKKKIFFVMEYVNGGELFEMIDRDGKLPEDLARKYFQQLISAVDFCHSRGVFHRDIKPENLLLDGEGDLKVTDFGLSALMMPEGLGGRRGSSDDLLHTRCGTPAYVAPEVLRNKGYDGAMADIWSCGIVLYALLAGFLPFIDENVMT 231          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: NUAK2_PONAB (NUAK family SNF1-like kinase 2 OS=Pongo abelii GN=NUAK2 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.560e-36
Identity = 78/205 (38.05%), Postives = 126/205 (61.46%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR--HTMCGTLDYLAPEMVENKEH-DYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            +E    LGKG +G+V   RE   +  VA+K I K++I+  +    +RRE+EI SSL HP+I+ ++  F +  +I +++EYA RG+LY  + + ++ +E++A  +   + +A+ YCH+N V+HRD+K EN+LLD  G +KI DFG S      +   T CG+  Y +PE+V  K +    VD+W+LG+L Y  ++G  PF+    K
Sbjct:   53 YEFLETLGKGTYGKVKKARESSGRL-VAIKSIRKDKIKDEQDLMHIRREIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGDLYDYISERQQLSEREARHFFRQIVSAVHYCHQNRVVHRDLKLENILLDANGNIKIADFGLSNLYHQGKFLQTFCGSPLYASPEIVNGKPYTGPEVDSWSLGVLLYILVHGTMPFDGHDHK 256          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: NUAK2_HUMAN (NUAK family SNF1-like kinase 2 OS=Homo sapiens GN=NUAK2 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.560e-36
Identity = 78/205 (38.05%), Postives = 126/205 (61.46%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR--HTMCGTLDYLAPEMVENKEH-DYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            +E    LGKG +G+V   RE   +  VA+K I K++I+  +    +RRE+EI SSL HP+I+ ++  F +  +I +++EYA RG+LY  + + ++ +E++A  +   + +A+ YCH+N V+HRD+K EN+LLD  G +KI DFG S      +   T CG+  Y +PE+V  K +    VD+W+LG+L Y  ++G  PF+    K
Sbjct:   53 YEFLETLGKGTYGKVKKARESSGRL-VAIKSIRKDKIKDEQDLMHIRREIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGDLYDYISERQQLSEREARHFFRQIVSAVHYCHQNRVVHRDLKLENILLDANGNIKIADFGLSNLYHQGKFLQTFCGSPLYASPEIVNGKPYTGPEVDSWSLGVLLYILVHGTMPFDGHDHK 256          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: MARK3_MOUSE (MAP/microtubule affinity-regulating kinase 3 OS=Mus musculus GN=Mark3 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.560e-36
Identity = 79/210 (37.62%), Postives = 128/210 (60.95%), Query Frame = 2
Query:   89 DFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRHTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFEAESQKTRSE 709
            ++ + + +GKG F +V L R + +   VA+KII K Q+    +Q +L RE+ I   L HPNI++L+     ++ ++LI+EYA  GE++  L  H R  E++A      + +A+ YCH+  ++HRD+K ENLLLD +  +KI DFG+S +    SK  T CG+  Y APE+ + K++D   VD W+LG++ Y  + G+ PF+ ++ K   E
Sbjct:   55 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ-KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE 263          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: MARK1_HUMAN (Serine/threonine-protein kinase MARK1 OS=Homo sapiens GN=MARK1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.560e-36
Identity = 78/210 (37.14%), Postives = 129/210 (61.43%), Query Frame = 2
Query:   89 DFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRHTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFEAESQKTRSE 709
            ++ + + +GKG F +V L R V +   VA+KII K Q+    +Q +L RE+ I   L HPNI++L+     ++ ++L++EYA  GE++  L  H R  E++A      + +A+ YCH+ +++HRD+K ENLLLD +  +KI DFG+S +    +K  T CG+  Y APE+ + K++D   VD W+LG++ Y  + G+ PF+ ++ K   E
Sbjct:   59 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ-KLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE 267          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KS6A1_HUMAN (Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens GN=RPS6KA1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.560e-36
Identity = 77/210 (36.67%), Postives = 133/210 (63.33%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVK---SKYPVALKIIFKEQIEKYKIQHQLRREME--IQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS---VQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            FE+ + LG+G FG+V+LVR+V    S +  A+K++ K  +   K++ ++R +ME  I + + HP +++L+  F  + +++LIL++   G+L+  L K   FTE+    Y+A L   L + H   +I+RD+KPEN+LLD EG +K+ DFG S   +    K ++ CGT++Y+APE+V  + H ++ D W+ G+L +E L G+ PF+ + +K
Sbjct:   62 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATL---KVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRK 268          

HSP 2 Score: 99.7525 bits (247), Expect = 1.568e-20
Identity = 57/166 (34.34%), Postives = 94/166 (56.63%), Query Frame = 2
Query:  242 EIQSSLR---HPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLL-LDHEGR---LKIGDFGWSVQSRSKR---HTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQKTRSE 709
            EI+  LR   HPNI+ L   + D + ++L+ E    GEL  ++ + + F+E++A+  + ++   + Y H   V+HRD+KP N+L +D  G    L+I DFG++ Q R++     T C T +++APE+++ + +D   D W+LGIL Y  L G  PF      T  E
Sbjct:  459 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEE 624          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KPC1B_CAEEL (Protein kinase C-like 1B OS=Caenorhabditis elegans GN=pkc-1 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.560e-36
Identity = 81/233 (34.76%), Postives = 135/233 (57.94%), Query Frame = 2
Query:   17 KQVSRMDTKTAEREDNRK---REWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQI-EKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRH---TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            +Q+S  D+ T       K      S+ DF   + LGKG FG+V L     +    A+KI+ K+ I +   ++  +  +  +  + +HP +  L+  F   +R+F ++EY + G+L  ++++ R+F E +A  Y A +T AL + H N VI+RD+K +N+LLD EG  ++ DFG   +  +K +   T CGT DY+APE+++  E+  +VD W LG+L YE + G PPFEA+++
Sbjct:  350 QQISEDDSGTTSSRSASKVPGGTLSIHDFTFMKVLGKGSFGKVMLAERKGTDEVYAIKILKKDVIVQDDDVECTMCEKRILSLAAKHPFLTALHSSFQTSDRLFFVMEYVNGGDLMFQIQRARKFDESRARFYAAEVTCALQFLHRNDVIYRDLKLDNILLDAEGHCRLADFGMCKEGINKDNLTSTFCGTPDYIAPEILQEMEYGVSVDWWALGVLMYEMMAGQPPFEADNE 582          
The following BLAST results are available for this feature:
BLAST of FC923273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPK8_ARATH7.004e-3739.30CBL-interacting serine/threonine-protein kinase 8 ... [more]
PK2_DICDI9.147e-3736.15Protein kinase 2 OS=Dictyostelium discoideum GN=pk... [more]
KAPCA_CRIGR9.147e-3738.42cAMP-dependent protein kinase catalytic subunit al... [more]
CIPKG_ARATH9.147e-3738.43CBL-interacting serine/threonine-protein kinase 16... [more]
NUAK2_PONAB1.560e-3638.05NUAK family SNF1-like kinase 2 OS=Pongo abelii GN=... [more]
NUAK2_HUMAN1.560e-3638.05NUAK family SNF1-like kinase 2 OS=Homo sapiens GN=... [more]
MARK3_MOUSE1.560e-3637.62MAP/microtubule affinity-regulating kinase 3 OS=Mu... [more]
MARK1_HUMAN1.560e-3637.14Serine/threonine-protein kinase MARK1 OS=Homo sapi... [more]
KS6A1_HUMAN1.560e-3636.67Ribosomal protein S6 kinase alpha-1 OS=Homo sapien... [more]
KPC1B_CAEEL1.560e-3634.76Protein kinase C-like 1B OS=Caenorhabditis elegans... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31702H10EF StrClemenN Citrus clementina cDNA clone C31702H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923273 ID=FC923273; Name=FC923273; organism=Citrus clementina; type=EST; length=712bp
GGACCTGATCTGGAATAAGCAGGTGTCCCGAATGGATACCAAAACAGCAG
AACGAGAAGATAATCGTAAGAGAGAATGGTCCTTACAAGACTTCGAGATT
GGGAGACCTCTCGGCAAGGGCAAATTCGGCCGCGTCTATCTCGTCCGAGA
AGTCAAGAGCAAATATCCAGTGGCATTGAAGATTATATTCAAGGAGCAAA
TTGAGAAGTACAAAATTCAACATCAATTGAGGAGGGAAATGGAAATTCAA
TCGAGTCTACGTCACCCTAATATACTGCGTCTCTACGGTTGGTTTCATGA
TGATGAACGTATTTTCTTGATTCTCGAGTACGCTCATCGCGGTGAGCTTT
ACAGGGAGCTCAGGAAGCACCGTCGTTTTACCGAACAGCAAGCCGCCACG
TACATTGCGAGTCTTACTAATGCGTTGGCTTACTGTCACGAGAATCACGT
GATTCATAGAGATATTAAGCCTGAAAATCTGTTGCTTGATCATGAGGGTC
GATTGAAAATTGGTGATTTTGGATGGTCGGTACAGTCAAGAAGCAAGAGA
CATACTATGTGTGGGACATTAGATTACTTGGCCCCTGAAATGGTGGAAAA
CAAAGAACATGATTATGCTGTAGATAACTGGACGTTGGGTATTCTTTGCT
ATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCAGAGAGTCAAAAGACA
CGTTCAGAAGGA
back to top