FC923273

Overview
NameFC923273
Unique NameFC923273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: SRK2D_ARATH (Serine/threonine-protein kinase SRK2D OS=Arabidopsis thaliana GN=SRK2D PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 74/202 (36.63%), Postives = 111/202 (54.95%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE--GRLKIGDFGWSVQS--RSKRHTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFE 682
            ++  + +G G FG   L+ +  +K  VA+K I + +    KI   ++RE+    SLRHPNI+R          + +++EYA  GELY  +    RF+E +A  +   L + ++YCH   + HRD+K EN LLD     RLKI DFG+S  S   S+  +  GT  Y+APE++  +E+D    D W+ G+  Y  L GA PFE
Sbjct:   23 YDFVKDIGSGNFGVARLMTDRVTKELVAVKYIERGE----KIDENVQREIINHRSLRHPNIVRFKEVILTPSHLAIVMEYAAGGELYERICNAGRFSEDEARFFFQQLISGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEILLRQEYDGKLADVWSCGVTLYVMLVGAYPFE 220          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: SRK2B_ARATH (Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 77/205 (37.56%), Postives = 108/205 (52.68%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE--GRLKIGDFGWSVQS--RSKRHTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFE 682
            +  +E+ + +G G FG   L+R   SK  VA+K I +      KI   + RE+    SLRHPNI+R          I + +EYA  GEL+  +    RF+E +A  +   L + ++YCH   + HRD+K EN LLD     RLKI DFG+S  S   S   +  GT  Y+APE++   E+D    D W+ G+  Y  L GA PFE
Sbjct:    1 MDKYELVKDIGAGNFGVARLMRVKNSKELVAMKYIERGP----KIDENVAREIINHRSLRHPNIIRFKEVVLTPTHIAIAMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSMPKSTVGTPAYIAPEVLSRGEYDGKMADVWSCGVTLYVMLVGAYPFE 201          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: SAPK5_ORYSJ (Serine/threonine-protein kinase SAPK5 OS=Oryza sativa subsp. japonica GN=SAPK5 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 74/205 (36.10%), Postives = 111/205 (54.15%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHE--GRLKIGDFGWSVQS--RSKRHTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFE 682
            ++ +E  R +G G FG   L+R  +++  VA+K I +      +I   + RE+    SLRHPNI+R          + +++EYA  GEL+  + +  RF E +A  +   L   ++YCH   + HRD+K EN LLD     RLKI DFG+S  S   S+  +  GT  Y+APE++  +E+D    D W+ G+  Y  L GA PFE
Sbjct:    1 MEKYEPVREIGAGNFGVAKLMRNKETRELVAMKFIERGN----RIDENVFREIVNHRSLRHPNIIRFKEVVVTGRHLAIVMEYAAGGELFERICEAGRFHEDEARYFFQQLVCGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFE 201          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KPSH1_MOUSE (Serine/threonine-protein kinase H1 OS=Mus musculus GN=Pskh1 PE=2 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 69/209 (33.01%), Postives = 114/209 (54.55%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG---RLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            ++I   +G+G F RV  V    ++ P A+K+I  +  E  ++      E+ +   +RH NI++L   F   ER+++++E A  GEL+  +     FTE+ A   +  + + + Y H   + HRD+KPENLL  H G   ++ I DFG +  +R K       T CGT +Y+APE++  K +  +VD W LG++ Y  L G  PFE +++
Sbjct:   98 YDIKALIGRGSFSRVVRVEHRATRQPYAIKMIETKYREGREV---CESELRVLRRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLLYYHPGTDSKIIITDFGLA-SARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDMWALGVIAYILLSGTMPFEDDNR 302          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KPSH1_HUMAN (Serine/threonine-protein kinase H1 OS=Homo sapiens GN=PSKH1 PE=1 SV=4)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 69/209 (33.01%), Postives = 114/209 (54.55%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG---RLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            ++I   +G+G F RV  V    ++ P A+K+I  +  E  ++      E+ +   +RH NI++L   F   ER+++++E A  GEL+  +     FTE+ A   +  + + + Y H   + HRD+KPENLL  H G   ++ I DFG +  +R K       T CGT +Y+APE++  K +  +VD W LG++ Y  L G  PFE +++
Sbjct:   98 YDIKALIGRGSFSRVVRVEHRATRQPYAIKMIETKYREGREV---CESELRVLRRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLLYYHPGTDSKIIITDFGLA-SARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDMWALGVIAYILLSGTMPFEDDNR 302          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KPSH1_BOVIN (Serine/threonine-protein kinase H1 OS=Bos taurus GN=PSKH1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 69/209 (33.01%), Postives = 114/209 (54.55%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEG---RLKIGDFGWSVQSRSK-----RHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            ++I   +G+G F RV  V    ++ P A+K+I  +  E  ++      E+ +   +RH NI++L   F   ER+++++E A  GEL+  +     FTE+ A   +  + + + Y H   + HRD+KPENLL  H G   ++ I DFG +  +R K       T CGT +Y+APE++  K +  +VD W LG++ Y  L G  PFE +++
Sbjct:   98 YDIKALIGRGSFSRVVRVEHRATRQPYAIKMIETKYREGREV---CESELRVLRRVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDLKPENLLYYHPGTDSKIIITDFGLA-SARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVDMWALGVIAYILLSGTMPFEDDNR 302          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KCC1G_HUMAN (Calcium/calmodulin-dependent protein kinase type 1G OS=Homo sapiens GN=CAMK1G PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 70/224 (31.25%), Postives = 116/224 (51.79%), Query Frame = 2
Query:   53 REDNRKREWSLQDFEIGRP------LGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLL---DHEGRLKIGDFGWS-VQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            +E++    W  Q   I +       LG G F  V+LV++  +    ALK I K    +      L  E+ +   ++H NI+ L   +      +L+++    GEL+  + +   +TE+ A+  I  + +A+ Y HEN ++HRD+KPENLL    +   ++ I DFG S ++      T CGT  Y+APE++  K +  AVD W++G++ Y  L G PPF  E++
Sbjct:    4 KEEDDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE 224          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKT_ORYSJ (CBL-interacting protein kinase 29 OS=Oryza sativa subsp. japonica GN=CIPK29 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 76/211 (36.02%), Postives = 112/211 (53.08%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKII--------FKEQIEKYKIQHQ-LRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFG-WSVQSRSKRHTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPFEAES 691
            +E+G  LG+G   +VYL R++ +   VA+K           +   E   ++   + RE  I   LRH +++RL       +++  +L+ A  GEL+  L    R TE  A  Y   L +A+ YCH   V HRDIKPENLLLD  G LK+ DFG  +V   +  HT+CGT  Y+APE++  K ++ A VD W+ G++ +    G  PF   S
Sbjct:   32 YELGGLLGRGASAKVYLARDLLTGRDVAIKSFPNPRHGGGLRGGEEDVLLRPAPIEREAAILPRLRHRHVMRLREILATRKKVHFVLDLAAGGELFSLLDASGRMTEDLARHYFRQLISAVRYCHSRGVYHRDIKPENLLLDDAGDLKVADFGLGAVADGALHHTLCGTPAYVAPEILSRKGYNPAKVDIWSCGVVLFVLAAGYLPFNDAS 242          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: SAX1_CAEEL (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis elegans GN=sax-1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 75/247 (30.36%), Postives = 121/247 (48.99%), Query Frame = 2
Query:   65 RKREWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFK-EQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFG--------------------------------------WSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE 688
            ++   ++ DFE  + +G+G FG V LV++  + +  A+KI+ K E +EK +  H +R E +I S      ++++Y  F D   ++L++E+   G++   L K    TE+    YIA    A+ + H    IHRDIKP+NLLLD  G +K+ DFG                                      W    R+  ++  GT DY+APE+ +   +  + D W+LG++ YE L G PPF +E
Sbjct:   78 KRTRLTVNDFESLKVIGRGAFGEVRLVQKHDTGHIYAMKILRKSEMVEKEQTAH-VRAERDILSEADCDWVVKMYYSFQDYSNLYLVMEFLPGGDMMTLLIKKDTLTEEATQFYIAEAALAIQFIHSLGFIHRDIKPDNLLLDARGHVKLSDFGLCTGLKKFHRTDHYRNWPSTLPPDFISKPFESKRKAETWKRNRRAYAYSTVGTPDYIAPEVFQPNGYTKSCDWWSLGVIMYEMLIGYPPFCSE 323          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PRKC_BACSU (Serine/threonine-protein kinase prkC OS=Bacillus subtilis GN=prkC PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 65/204 (31.86%), Postives = 111/204 (54.41%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFG--WSVQSRSKRHT--MCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAES 691
            ++I R +G G    VYL  ++     VA+KI+  +     +   + RRE +  SSL HPNI+ +Y    +D+  ++++EY     L   +  +     ++A   +  + +A+A+ H+N ++HRDIKP N+L+DH G +K+ DFG   ++ S +  HT  + G++ YL+PE           D + LGI+ +E L G  PF+ ES
Sbjct:   11 YQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEEDDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALSSTTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGES 214          
The following BLAST results are available for this feature:
BLAST of FC923273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRK2D_ARATH5.031e-2736.63Serine/threonine-protein kinase SRK2D OS=Arabidops... [more]
SRK2B_ARATH5.031e-2737.56Serine/threonine-protein kinase SRK2B OS=Arabidops... [more]
SAPK5_ORYSJ5.031e-2736.10Serine/threonine-protein kinase SAPK5 OS=Oryza sat... [more]
KPSH1_MOUSE5.031e-2733.01Serine/threonine-protein kinase H1 OS=Mus musculus... [more]
KPSH1_HUMAN5.031e-2733.01Serine/threonine-protein kinase H1 OS=Homo sapiens... [more]
KPSH1_BOVIN5.031e-2733.01Serine/threonine-protein kinase H1 OS=Bos taurus G... [more]
KCC1G_HUMAN5.031e-2731.25Calcium/calmodulin-dependent protein kinase type 1... [more]
CIPKT_ORYSJ5.031e-2736.02CBL-interacting protein kinase 29 OS=Oryza sativa ... [more]
SAX1_CAEEL6.571e-2730.36Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
PRKC_BACSU6.571e-2731.86Serine/threonine-protein kinase prkC OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionC31702H10EF StrClemenN Citrus clementina cDNA clone C31702H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923273 ID=FC923273; Name=FC923273; organism=Citrus clementina; type=EST; length=712bp
GGACCTGATCTGGAATAAGCAGGTGTCCCGAATGGATACCAAAACAGCAG
AACGAGAAGATAATCGTAAGAGAGAATGGTCCTTACAAGACTTCGAGATT
GGGAGACCTCTCGGCAAGGGCAAATTCGGCCGCGTCTATCTCGTCCGAGA
AGTCAAGAGCAAATATCCAGTGGCATTGAAGATTATATTCAAGGAGCAAA
TTGAGAAGTACAAAATTCAACATCAATTGAGGAGGGAAATGGAAATTCAA
TCGAGTCTACGTCACCCTAATATACTGCGTCTCTACGGTTGGTTTCATGA
TGATGAACGTATTTTCTTGATTCTCGAGTACGCTCATCGCGGTGAGCTTT
ACAGGGAGCTCAGGAAGCACCGTCGTTTTACCGAACAGCAAGCCGCCACG
TACATTGCGAGTCTTACTAATGCGTTGGCTTACTGTCACGAGAATCACGT
GATTCATAGAGATATTAAGCCTGAAAATCTGTTGCTTGATCATGAGGGTC
GATTGAAAATTGGTGATTTTGGATGGTCGGTACAGTCAAGAAGCAAGAGA
CATACTATGTGTGGGACATTAGATTACTTGGCCCCTGAAATGGTGGAAAA
CAAAGAACATGATTATGCTGTAGATAACTGGACGTTGGGTATTCTTTGCT
ATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCAGAGAGTCAAAAGACA
CGTTCAGAAGGA
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