FC923273

Overview
NameFC923273
Unique NameFC923273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KGP2_HUMAN (cGMP-dependent protein kinase 2 OS=Homo sapiens GN=PRKG2 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.335e-38
Identity = 88/205 (42.93%), Postives = 120/205 (58.54%), Query Frame = 2
Query:   86 QDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS--VQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            Q+ EI   LG G FGRV LV+        A+K I K+ I   K Q  +  E  I   L  P I++LY  F D++ ++++LE    GEL+  LR    F E  +   +A +T A  Y H   +I+RD+KPENL+LD EG LK+ DFG++  + S  K  T CGT +Y+APE++ NK HD++VD W+LGIL YE L G PPF    Q
Sbjct:  451 QNLEIIATLGVGGFGRVELVKVKNENVAFAMKCIRKKHIVDTKQQEHVYSEKRILEELCSPFIVKLYRTFKDNKYVYMLLEACLGGELWSILRDRGSFDEPTSKFCVACVTEAFDYLHRLGIIYRDLKPENLILDAEGYLKLVDFGFAKKIGSGQKTWTFCGTPEYVAPEVILNKGHDFSVDFWSLGILVYELLTGNPPFSGVDQ 655          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_DANRE (Serine/threonine-protein kinase PLK4 OS=Danio rerio GN=plk4 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38
Identity = 77/209 (36.84%), Postives = 124/209 (59.33%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRR-FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            ++DF++   LGKG F  VY  + V +   VA+K+I K+ + K  +  ++  E+EIQ  L+HP++L LY +F D   ++L+LE  H GE+ R L++ +  FTE++A  ++  +   + Y H + ++HRD+   NLLL     +KI DFG + Q +    K  TMCGT +Y++PE+     H    D W+LG + Y FL G PPF+ ++ K
Sbjct:    9 IEDFKVLTLLGKGSFACVYRAKSVNTGLEVAIKMIDKKAMHKAGMVQRVINEVEIQCRLKHPSVLELYNYFEDSNYVYLVLEMCHNGEMSRYLKERKNPFTEEEARHFMHQIVKGMLYLHTHGIMHRDLTLTNLLLTTSMNIKIADFGLATQLKLPSEKHFTMCGTPNYISPEVATRSAHGLESDVWSLGCMFYAFLTGRPPFDTDTVK 217          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PLK4_BOVIN (Serine/threonine-protein kinase PLK4 OS=Bos taurus GN=PLK4 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38
Identity = 74/209 (35.41%), Postives = 123/209 (58.85%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRR-FTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR---SKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQK 697
            ++DF +G  LGKG F  VY    + +   VA+K+I K+ + K  +  +++ E++I   L+HP+IL LY +F D+  ++L+LE  H GE+ R L+  R+ F+E +A  ++  +   + Y H + ++HRD+   NLLL     +KI DFG + Q +    K +T+CGT +Y++PE+     H    D W+LG + Y  L G PPF+ ++ K
Sbjct:    9 IEDFRVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDNNYVYLVLEMCHNGEMNRYLKNRRKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLAAQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDIWSLGCMFYTLLIGRPPFDTDTVK 217          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKR_ORYSJ (Putative CBL-interacting protein kinase 27 OS=Oryza sativa subsp. japonica GN=CIPK27 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38
Identity = 78/206 (37.86%), Postives = 123/206 (59.71%), Query Frame = 2
Query:   92 FEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPFEAES 691
            +E+GR LG G FGRV+  R+V++   VA+K++ K+++E+  +  Q++RE+ +   + HP+++ L+       +++L LE    GEL+  + +H R  E  A  Y   L +A+ +CH   V HRD+KPENLLLD  G LK+ DFG S  +   R     HT CGT  Y+APE++    +D A  D W+ G++ Y  L GA PF+ ++
Sbjct:   11 YEMGRVLGHGNFGRVHAARDVRTGRAVAMKVVSKDKVERAGMAEQIKREIAVMKMVSHPSVVELHEVMATRTKVYLALELVRGGELFDRIARHGRVGEGVARRYFRQLVSAVDFCHGRGVYHRDLKPENLLLDEAGNLKVADFGLSALACHARPDGLLHTACGTPAYVAPEVLAGNGYDGAKADLWSCGVILYVLLAGALPFQDDN 216          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKJ_ARATH (CBL-interacting serine/threonine-protein kinase 19 OS=Arabidopsis thaliana GN=CIPK19 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38
Identity = 84/205 (40.98%), Postives = 123/205 (60.00%), Query Frame = 2
Query:   83 LQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPF 679
            L  +E+GR LG G F +VYL R  +S   VA+K+I KE++ K  +   ++RE+ I   +RHPNI++L+       +I+ ++EY   GEL+ ++ K  R  E+ A  Y   L +A+++CH   V HRD+KPENLLLD  G LK+ DFG S  S   R     HT CGT  Y+APE++  K +D A VD W+ G++ +  + G  PF
Sbjct:   25 LGKYEMGRLLGHGTFAKVYLARNAQSGESVAIKVIDKEKVLKSGLIAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVKGGELFNKVAK-GRLKEEMARKYFQQLISAVSFCHFRGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVILFVLMAGFLPF 228          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: PK3_DICDI (Protein kinase 3 OS=Dictyostelium discoideum GN=pkgC PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 86/220 (39.09%), Postives = 132/220 (60.00%), Query Frame = 2
Query:   71 REWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWS-------VQSRSKRH-----TMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAESQ 694
            ++ ++ DFE+ + LG G FGRVYLVR   +    A+K++ K+ + K K       E  + S++ HP I+RL+  F +++ +F+ ++Y   GEL+  L+K  +F E+ A  YIA +  +L Y H N++I+RDIKPEN+LLD EG +K+ DFG S       V S++        T CGT +YLAPE++    H  A D W++GIL +E L G  PF A ++
Sbjct:  491 KKLTIDDFELLKVLGVGSFGRVYLVRRKDTGKFYAMKVLNKKDMLKKKQIAHTNTEKMVLSTMDHPFIVRLHFAFQNEDFLFMCMDYVPGGELFHHLQKAGKFPEELAKFYIAEVICSLHYLHSNNIIYRDIKPENILLDEEGHIKLTDFGLSKSGITSVVGSKNGGEGGFATTFCGTPEYLAPEIITGAGHGKAADWWSVGILLFEMLTGRSPFLASNR 710          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 80/210 (38.10%), Postives = 128/210 (60.95%), Query Frame = 2
Query:   89 DFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRHTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFEAESQKTRSE 709
            ++ + R +GKG F +V L R + +   VA+KII K Q+    +Q +L RE+ I   L HPNI++L+     ++ ++L++EYA  GE++  L  H R  E++A      + +A+ YCH+ +++HRD+K ENLLLD E  +KI DFG+S +    SK  T CG+  Y APE+ + K++D   VD W+LG++ Y  + G+ PF+  + K   E
Sbjct:   58 NYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQ-KLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRE 266          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 80/210 (38.10%), Postives = 128/210 (60.95%), Query Frame = 2
Query:   89 DFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSR--SKRHTMCGTLDYLAPEMVENKEHD-YAVDNWTLGILCYEFLYGAPPFEAESQKTRSE 709
            ++ + R +GKG F +V L R + +   VA+KII K Q+    +Q +L RE+ I   L HPNI++L+     ++ ++L++EYA  GE++  L  H R  E++A      + +A+ YCH+ +++HRD+K ENLLLD E  +KI DFG+S +    SK  T CG+  Y APE+ + K++D   VD W+LG++ Y  + G+ PF+  + K   E
Sbjct:   58 NYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQ-KLFREVRIMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGHNLKELRE 266          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: KAPCA_RAT (cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus GN=Prkaca PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 81/212 (38.21%), Postives = 130/212 (61.32%), Query Frame = 2
Query:   56 EDNRKREWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYK-IQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDYAVDNWTLGILCYEFLYGAPPFEAE 688
            ED  +    L  F+  + LG G FGRV LV+  +S    A+KI+ K+++ K K I+H L  E  I  ++  P +++L   F D+  +++++EY   GE++  LR+  RF+E  A  Y A +     Y H   +I+RD+KPENLL+D +G +++ DFG++ + + +  T+CGT +YLAPE++ +K ++ AVD W LG+L YE   G PPF A+
Sbjct:   32 EDPSQNTAQLDHFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242          
BLAST of FC923273 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 82/210 (39.05%), Postives = 123/210 (58.57%), Query Frame = 2
Query:   68 KREWSLQDFEIGRPLGKGKFGRVYLVREVKSKYPVALKIIFKEQIEKYKIQHQLRREMEIQSSLRHPNILRLYGWFHDDERIFLILEYAHRGELYRELRKHRRFTEQQAATYIASLTNALAYCHENHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKR-----HTMCGTLDYLAPEMVENKEHDYA-VDNWTLGILCYEFLYGAPPF 679
            +R   ++ + IGR LG+G FG+VY  R + S   VA+K+I KE+I K  +  Q++RE+ I   +RHPN+L+L+        I+  LEYA  GEL+ ++ +  +  E+ A  Y   L +A+ YCH   V HRD+KPENLLLD    LK+ DFG S  + S+R     HT CGT  Y+APE++  K +  +  D W+ G++ +  +    PF
Sbjct:    3 ERSVLMERYVIGRQLGQGTFGKVYYARNLSSGQSVAIKMIDKEKILKVGLMEQIKREISIMRLVRHPNVLQLFEVMATKSNIYFALEYAKGGELFHKMAR-AKLNEESARNYFQQLISAMDYCHSRGVYHRDLKPENLLLDENETLKVSDFGLSALAESRRQDGLLHTACGTPAYVAPEVLSRKGYSGSKADVWSCGVILFVLVANYLPF 211          
The following BLAST results are available for this feature:
BLAST of FC923273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KGP2_HUMAN6.335e-3842.93cGMP-dependent protein kinase 2 OS=Homo sapiens GN... [more]
PLK4_DANRE8.273e-3836.84Serine/threonine-protein kinase PLK4 OS=Danio reri... [more]
PLK4_BOVIN8.273e-3835.41Serine/threonine-protein kinase PLK4 OS=Bos taurus... [more]
CIPKR_ORYSJ8.273e-3837.86Putative CBL-interacting protein kinase 27 OS=Oryz... [more]
CIPKJ_ARATH8.273e-3840.98CBL-interacting serine/threonine-protein kinase 19... [more]
PK3_DICDI1.081e-3739.09Protein kinase 3 OS=Dictyostelium discoideum GN=pk... [more]
MARK4_MOUSE1.081e-3738.10MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN1.081e-3738.10MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
KAPCA_RAT1.081e-3738.21cAMP-dependent protein kinase catalytic subunit al... [more]
CIPKS_ORYSJ1.081e-3739.05CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC31702H10EF StrClemenN Citrus clementina cDNA clone C31702H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923273 ID=FC923273; Name=FC923273; organism=Citrus clementina; type=EST; length=712bp
GGACCTGATCTGGAATAAGCAGGTGTCCCGAATGGATACCAAAACAGCAG
AACGAGAAGATAATCGTAAGAGAGAATGGTCCTTACAAGACTTCGAGATT
GGGAGACCTCTCGGCAAGGGCAAATTCGGCCGCGTCTATCTCGTCCGAGA
AGTCAAGAGCAAATATCCAGTGGCATTGAAGATTATATTCAAGGAGCAAA
TTGAGAAGTACAAAATTCAACATCAATTGAGGAGGGAAATGGAAATTCAA
TCGAGTCTACGTCACCCTAATATACTGCGTCTCTACGGTTGGTTTCATGA
TGATGAACGTATTTTCTTGATTCTCGAGTACGCTCATCGCGGTGAGCTTT
ACAGGGAGCTCAGGAAGCACCGTCGTTTTACCGAACAGCAAGCCGCCACG
TACATTGCGAGTCTTACTAATGCGTTGGCTTACTGTCACGAGAATCACGT
GATTCATAGAGATATTAAGCCTGAAAATCTGTTGCTTGATCATGAGGGTC
GATTGAAAATTGGTGATTTTGGATGGTCGGTACAGTCAAGAAGCAAGAGA
CATACTATGTGTGGGACATTAGATTACTTGGCCCCTGAAATGGTGGAAAA
CAAAGAACATGATTATGCTGTAGATAACTGGACGTTGGGTATTCTTTGCT
ATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCAGAGAGTCAAAAGACA
CGTTCAGAAGGA
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