FC923279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_SYNP6 (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.480e-28 Identity = 76/180 (42.22%), Postives = 110/180 (61.11%), Query Frame = 1 Query: 49 GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDIS---TDVKARGQVLGEDGVRVHSMVLPRL 576 G+DIG + + PLE+PV +DL +L SQ + VV+DFT +YDNV++A A+G+R VV + E + L+ F +KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E + + D PS A + A L+ LG+ +N ++ T ARG V G + +R+HS+ LP L Sbjct: 44 GQDIGEIVGLG-PLEVPVTNDLEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQLQELAEFAEKASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILELHHDQKADAPSGTAIKTAQMLAELGKTFNPPKVTEKETMPGARGAV-GPENIRIHSVRLPGL 221
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_SYNE7 (Dihydrodipicolinate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=dapB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.480e-28 Identity = 76/180 (42.22%), Postives = 110/180 (61.11%), Query Frame = 1 Query: 49 GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDIS---TDVKARGQVLGEDGVRVHSMVLPRL 576 G+DIG + + PLE+PV +DL +L SQ + VV+DFT +YDNV++A A+G+R VV + E + L+ F +KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E + + D PS A + A L+ LG+ +N ++ T ARG V G + +R+HS+ LP L Sbjct: 44 GQDIGEIVGLG-PLEVPVTNDLEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQLQELAEFAEKASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILELHHDQKADAPSGTAIKTAQMLAELGKTFNPPKVTEKETMPGARGAV-GPENIRIHSVRLPGL 221
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_THEEB (Dihydrodipicolinate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=dapB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.344e-28 Identity = 74/186 (39.78%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 28 AIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQ--VLGEDGVRVHSMVLPRL 576 A+D VGEDIG + LEIP+ L V + +Q K V++DFT VY+NV+ A A+G+ VV + E + L+ F DKA MG +IAP SIG +LLQ+AAI AS ++ +VEI+E N + D PS A Q A L+ LG+ +N + RG +R+HS+ LP L Sbjct: 40 AVDRKQVGEDIGEALGLGT-LEIPISGSLQEVCVAAAQEKQPVVMVDFTHPQAVYENVRMAIAYGVYPVVGTTGLSPEQIEELAEFADKADMGAVIAPNFSIGMVLLQEAAIRASQYFDHVEIIELHHNQKADAPSGTALQTAQRLAELGKTFNPPQVQESEHLRGARGAFAAAEIRIHSVRLPGL 224
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_SYNP2 (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dapB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.060e-26 Identity = 71/193 (36.79%), Postives = 113/193 (58.55%), Query Frame = 1 Query: 13 MEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQ--VLGEDGVRVHSMVLPRL 576 ME+ A+D + +G+D G + +E+P+++DL L +QSK + V++DFT S VY N + A A+G+R VV + E ++ L F +KAS G LI P SIG +LLQQA++ A+ ++ +VEI+E N + D PS A + A L+ LG+ +N ++ + G + ED +R+HS+ LP L Sbjct: 32 MEIIAAVDKNPALLGQDAGEIAGCGA-VEVPIVNDLEASLVMATQSKIQGVMVDFTHPSGVYANTRAAIAYGVRPVVGTTGLSEEQINDLKEFAEKASTGALIIPNFSIGVVLLQQASLQAAKYFDHVEIIELHHNQKADAPSGTAIKTAQMLAELGKQFNPAEVEEKEEMPGAKGAVTEDNIRIHSVRLPGL 223
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_GLOVI (Dihydrodipicolinate reductase OS=Gloeobacter violaceus GN=dapB PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26 Identity = 69/192 (35.94%), Postives = 110/192 (57.29%), Query Frame = 1 Query: 13 MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTD---VKARGQVLGEDGVRVHSMVLPRL 576 M V GA+D + ED G + + P+++ V +L + ++Q +A V++DFT +YD V+ A A+G+R VV + E + L+ F DKAS GC++AP +IG ILLQQA + A+ ++ +VEI+E N + D PS A A ++ G+ +N ++S ARG + D +R+HS+ LP L Sbjct: 28 MAVVGAVDRSHIDEDAGELAGIG-PIDVLVTDNLEITCAMVAQERAPGVMVDFTHPRGIYDRVRSAIAYGVRPVVGTTGLPPEHIEELAEFADKASTGCIVAPNFAIGMILLQQACLRAAEYFDHVEIIELHHNRKADAPSGTALATAQMIATTGKTFNVPEVSESELVAGARGGMTPGD-IRIHSLRLPGL 217
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_ACAM1 (Dihydrodipicolinate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=dapB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.263e-26 Identity = 72/184 (39.13%), Postives = 108/184 (58.70%), Query Frame = 1 Query: 37 SHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNR---EDISTDVKARGQVLGEDGVRVHSMVLPRL 576 S GE +G+ L I + ++L VL + +Q K V++DFT S+VY N++ A A+G+ V+ + E ++ L+ F +KASMGCL+ P SIG +LLQQAA+ AS ++ +VEI+E N + D PS A + A L +LG+ YN E+ ARG LG + +R+HS+ LP L Sbjct: 46 SLDAGELVGL-----DTLNIELTNELEPVLAAAAQEKQPCVMVDFTHPSSVYSNIRSAIAYGVFPVIGTTGLSDEQMNDLTEFTEKASMGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAVKTAQLLGDLGKTYNPALVEEKEHLAGARGS-LGSENIRIHSIRLPGL 223
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_SYNPX (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain WH8102) GN=dapB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.988e-21 Identity = 68/195 (34.87%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 19 VAGAIDSH--SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQVLG--EDGVRVHSMVLPRL 576 + GAID+ G DIG+ + + LE+ V +D L ++SQS +A AV++DFT S VY++ + A A+G+ V+ + E +S L F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + D PS + A + LG+ +N ++ G G E G+R+HS+ LP L Sbjct: 32 LVGAIDNTPGKEGSDIGLELGLGE-LEVAVTADFEGCLCAVSQSVRDAEAGAVLVDFTHPSVVYEHTRAAIAYGVHPVIGTTGLSPEQLSDLCQFAAKASIGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNCKADAPSGTCIKTAELMEELGKSFNPAEVDEHESLAGSRGGRRESGLRLHSLRLPGL 225
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_SYNR3 (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain RCC307) GN=dapB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.903e-21 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 1 Query: 16 EVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQ--VLGEDGVRVHSMVLPRL 576 ++ GAID+ GED+G+ + + LE+ + D L SQ AV++DFT VY++ + A A+G+ V+ + E + L++F KASMG + P S+G +LLQQAA +A+ Y + E+VE N + D PS + A + LG+ +N +++ G L G+R+HS+ LP L Sbjct: 31 QLVGAIDTCPGREGEDVGLALGLGE-LEVALTQDFEGALCLASQQHPGAVLVDFTHPKVVYEHTRAAIAYGVTPVIGTTGLAPEQLQELASFAAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDHAELVELHHNRKADAPSGTCIKTAELMEELGKQFNAQEVEEHETLEGSRGGLRPSGLRLHSIRLPGL 221
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_PROMA (Dihydrodipicolinate reductase OS=Prochlorococcus marinus GN=dapB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.903e-21 Identity = 67/207 (32.37%), Postives = 109/207 (52.66%), Query Frame = 1 Query: 1 ESRGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVL----GSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQ--VLGEDGVRVHSMVLPRLPSSTTV 594 +S E+ AID+ + G DIG M+Q +++ V +DL L S+ S AV+IDFT + VY++ + + A+G+ V+ + + + L F +KAS+G I P S+G +LLQQAA +A+ Y E+ ES N + D PS + A + +G+ +N+ I +G L E G+R+HS+ LP + + V Sbjct: 25 KSNDCELVAAIDNANEMEGVDIGTALGMDQ-MDVAVTADLEGSLCVASQSVRNSSGNAVLIDFTHPNVVYEHSRASIAYGVHPVIGTTGLSIVQLEELREFANKASIGAAIIPNFSVGMVLLQQAAAAAASFYDYAELTESHHNQKADAPSGTCIKTAEIIEEIGKSFNKTTIKEQESIKGSRGGLRESGLRLHSVRLPGIVAQQQV 230
BLAST of FC923279 vs. ExPASy Swiss-Prot
Match: DAPB_PROMM (Dihydrodipicolinate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=dapB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.136e-20 Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = 1 Query: 16 EVAGAIDSH------SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR------AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR-DFPSPDATQIANNLSNLGQIYNREDISTDVKARGQ--VLGEDGVRVHSMVLPRL 576 E+ GA+D+ +GE++G+ L++ + SD+ L S+SQS R AV++DFT S VY++ + A A+G+ V+ + + + LS F KASMG + P S+G +LLQQAA +A+ Y N E+ E N + D PS + A + LG+ +N ++ G L G+R+HS+ LP L Sbjct: 35 ELVGAVDTTPGKEGVEIGEELGIGV-----LDVALTSDIEACLCSVSQSFHRTGPGQGAVLVDFTHPSVVYEHTRAAFAYGVHPVIGTTGLSHQQLVDLSEFAAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDNAELTELHHNRKADAPSGTCIKTAEMMEELGKSFNSPEVDEHESLTGSRGGLRASGLRLHSLRLPGL 231 The following BLAST results are available for this feature:
BLAST of FC923279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923279 ID=FC923279; Name=FC923279; organism=Citrus clementina; type=EST; length=597bpback to top |