FC923282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 49/74 (66.22%), Postives = 62/74 (83.78%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSS-MQETIERYLKHT 607 M RGK Q++RIEN +RQVTFSKRRNGLLKKA E+SVLCDAEVA I+FSP+GKL E+A+ S M + +ERY +++ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYS 74
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 50/72 (69.44%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASS-SMQETIERYLK 601 M RG+ +++RIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVA+IIFS RGKL EF S+ SM +T+E+Y K Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK 72
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 50/72 (69.44%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASS-SMQETIERYLK 601 M RG+ +++RIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVA+IIFS RGKL EF S+ SM +T+E+Y K Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK 72
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEF--ASSSMQETIERYLKHTKDTRNKAQPTEQNMQHL 658 M RGK +++RIEN T+RQVTFSKRR GLLKKA ELSVLCDAE+ +IIFS GKL E+ ASSSM++ IERY K + A+ TE + QHL Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQK-----VSGARITEYDNQHL 87
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEF-ASSSMQETIERYLK 601 M RG+ +++RIE +RQVTF+KRRNGLLKKA+ELSVLCDAEVA+IIFS RGKL EF +SSSM +T+ERY K Sbjct: 1 MGRGRVELKRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQK 72
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20 Identity = 49/72 (68.06%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFAS-SSMQETIERYLK 601 M RG+ +++RIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEV++I+FS RGKL EF S S+M +T+ERY K Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQK 72
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20 Identity = 46/75 (61.33%), Postives = 62/75 (82.67%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKD 613 M R + ++RRIE+A +RQVTFSKRR GL KKA EL+VLCDA+VA+++FS GKLS+FASS+M E I++Y H+K+ Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFASSNMNEIIDKYTTHSKN 75
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.042e-20 Identity = 47/86 (54.65%), Postives = 67/86 (77.91%), Query Frame = 2 Query: 395 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQNMQ 652 R + +RRI+N +RQVTFSKRR GL KKA ELS+LCDAEV +++FS GKL +FAS+SM++ I+RY H+K T +A+P++ ++Q Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYNSHSK-TLQRAEPSQLDLQ 106
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19 Identity = 52/90 (57.78%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFA-SSSMQETIERYLK-HTKDTRNKAQPTEQNMQ 652 M RG+ +++RIEN TSRQVTF KRRNGLLKKA+ELSVLCDAEVA+I+FS RG+L E++ +++++ TI+RY K H + + A E N Q Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQ 90
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19 Identity = 48/83 (57.83%), Postives = 65/83 (78.31%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPT 637 M R K Q+++I+N+T+RQVTFSKRR GL KKA ELSVLCDA+VA+IIFS GKL +++SSSM++ +ER H+K+ QP+ Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRDLHSKNLEKLDQPS 83 The following BLAST results are available for this feature:
BLAST of FC923282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923282 ID=FC923282; Name=FC923282; organism=Citrus clementina; type=EST; length=669bpback to top |