FC923282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19 Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERY 595 M RGK +RRI+N+TSRQVTFSKRRNGLLKKA ELS+LCDAEV +++FS G+L EF+S++M+ I+RY Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRY 69
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19 Identity = 47/85 (55.29%), Postives = 64/85 (75.29%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQ 643 M RGK +RRI+N+TSRQVTFSKRRNG+ KKA EL++LCDAEV ++IFS G+L E++S+SM+ I+RY K + + A P + Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGKSKDEQQAVANPNSE 85
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.631e-19 Identity = 47/75 (62.67%), Postives = 61/75 (81.33%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKD 613 M RGK +++RI+NATSRQVTFSKRR+GL KKA ELS+LCDAEV +++FS +L +FASSSM+ IERY + +D Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKED 75
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19 Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASS--SMQETIERYLKH---TKDTRNKAQPTEQNMQHLK 661 M RGK +++RIEN TSRQVTFSKRR+GL+KK ELSVLCDA++ +I+FS +GKL+E+ + SM++ I+RY+K + N+A P N Q +K Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIK 96
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19 Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHTKDTRNKAQPTEQ 643 M RGK ++RI+++TSRQVTFSKRR GL+KKA EL++LCDAEV +IIFS GKL +FASSSM+ I+RY K + + P + Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPASE 85
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19 Identity = 52/96 (54.17%), Postives = 66/96 (68.75%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLK-----HTKDTRNKAQPTEQNMQHLK 661 M RGK +++RIEN +RQVTFSKR++GLLKKA+ELSVLCDAEV++IIFS GKL EF++ + TIERY + DT Q Q + LK Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLK 96
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19 Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFAS-SSMQETIERYLKHTKDTRNKAQPTEQNMQHLK 661 M RGK Q++RIEN RQVTF KRR GLLKKA ELSVLCDAE+ V+IFSP+GKL E A+ +M+ I++Y+K T R + T + L+ Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQ 92
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.654e-19 Identity = 54/97 (55.67%), Postives = 65/97 (67.01%), Query Frame = 2 Query: 383 IKMVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASS--SMQETIERYLKHTKDTRNKAQPTEQNMQHLKHE 667 I M RGK +++RIEN TSRQVTFSKRR GLLKK ELSVLCDA++ +IIFS +GKL E+ S SM + I RYL+ T + P E N L E Sbjct: 2 IIMGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQ----TTGASLPVEDNRVQLYDE 94
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 9.997e-19 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSS-MQETIERYLKHT 607 M RGK Q++RIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVA+IIFS +GKL E+A+ S M + +ERY +++ Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYS 74
BLAST of FC923282 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.705e-18 Identity = 52/109 (47.71%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 389 MVRGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIIFSPRGKLSEFASSSMQETIERYLKHT------------KDTRNKAQPTEQNMQ----HLKHE 667 M RGK +++RIEN+++RQVT+SKRRNG+LKKA E+SVLCDA V+VIIF+ GK+ EF+S+S+ + +++Y K T + NK + NMQ HLK E Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGE 109 The following BLAST results are available for this feature:
BLAST of FC923282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923282 ID=FC923282; Name=FC923282; organism=Citrus clementina; type=EST; length=669bpback to top |