FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SALDC (Glucose-1-phosphate adenylyltransferase OS=Salmonella dublin (strain CT_02021853) GN=glgC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 68/223 (30.49%), Postives = 104/223 (46.64%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMP-DAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A TV C+P+ A+ +G+M +D S +II F EKP P +MP DA K +ASMG+Y+F D L LL + S+DFG +IIP ++ A F YW D+GT+++++ ANL L + + YD P T LPP K DR +++++S GC + V S++ R R+ S +++ Sbjct: 161 ARCTVVCMPVPIKEATAFGVMAVDESDKIIDFVEKPANPP-------------AMPGDASKS--LASMGIYVFDADYLYELLAADDKDDASSHDFGKDIIPKITREGMAYAHPFPLSCVQSDPQAEPYWRDVGTLEAYWKANLDLASVTPELDMYDQNWPIRTHMESLPPAKFVQDRSGSHGMTLNSLVSGGCIISGSVVVQSVLFPRVRINSFCNIDSAVLL 368
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHOS5 (Glucose-1-phosphate adenylyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=glgC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 66/247 (26.72%), Postives = 115/247 (46.56%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 AD+T+ C+ + A+ +G+M +D S +I F EKP P G+ D + +ASMG+Y+F L +LL S+DFG ++IPA V++ A F+D YW D+GTI +F+ AN+ LT+ K + YD P +T ++ +PP K R + +++S C + ++ S++ R S + + ++++ + + +R V I G Sbjct: 154 ADVTIGCLTVPRMEATAFGVMHVDASLRITDFLEKPADPP--GIPGD------------EGNALASMGIYVFDWAFLRDLLIRDAEDPNSSHDFGHDLIPAIVRNGKAMAHRFSDSCVMTGLETEPYWRDVGTIDAFWQANIDLTDFTPKLDLYDREWPIWTYSQIVPPAKFIHDSERRRGMAISSLVSGDCIVSGSEIRSSLLFTGCRTHSYSSLSHVVALPHVTVNRKADLTNCVLDRGVVIPEG 386
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHISN (Glucose-1-phosphate adenylyltransferase OS=Rhizobium sp. (strain NGR234) GN=glgC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 66/224 (29.46%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVR----SRLESGVEFQD 605 AD+T+ C+ + A+ +G+M +D +II F EKP P +P + +ASMG+Y+F T L+++LR + S DFG +IIP V+ A F YW D+GTI +++ AN+ LT + + YD P +T + PP K R +++S C + ++ S++ GVR SRLE+ V D Sbjct: 154 ADVTIGCLEVPRMEATGFGVMHVDNEDRIIAFVEKPADPP-------------GIPGNPEMA-LASMGIYVFHTKFLMDMLRRDAADPKSSRDFGKDIIPYIVEHGKAVAHRFTHSCVRSDFEREAYWRDVGTIDAYWQANIDLTHITPELDIYDSTWPIWTFSEIKPPAKFVHDDEDRRGSATSSLVSGDCIISGAALNKSLLFTGVRVNSYSRLENAVVLPD 363
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBPA (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio parahaemolyticus GN=glgC2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 68/242 (28.10%), Postives = 111/242 (45.87%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL---SNDFGSEIIPASVKDHNVQAFLF---------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPI 683 A +TV+C+ + AS +G+M I +G + F EKP+ P ++PD +ASMG+Y+F DVL L L S+DFG++IIP + +V A+ F + YW D+GTI SF++AN+ L E Y T PP + + +++II+ G SVQHSI+ R++ D+++ S++ + + ++ V I Sbjct: 144 AKLTVACMDVPVKDASAFGVMGIAENGLVKSFVEKPENPP-------------TLPDD-NAKSLASMGIYIFDMDVLKEALTEDAKLETSSHDFGNDIIPKLIDTESVYAYKFCGSKGRVDKDCYWRDVGTIDSFYEANMDLLEPVPPMNLYQSNWAIRTYEPQFPPARTVSSATGNEGIFINSIIATGVINSGGSVQHSIISSNVRIQDSATVVDSIIFDDVEVGEGSQLVNCIVDKHVRI 371
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_NOCFA (Glucose-1-phosphate adenylyltransferase OS=Nocardia farcinica GN=glgC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 67/244 (27.46%), Postives = 113/244 (46.31%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFND------------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVDRCKIV-DAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQ 695 A +TV+ + + S AS +G + D SG+I QF EKP P PD + ASMG Y+F T VL++ +R+ S+ D G +IIPA V+ + F D YW D+GTI +F+DA++ L F Y+ P +A LPP K + + + I+ G L +V++S++ ++ G + +++M + + + ++ V +G G+ Sbjct: 146 AGVTVAGIRVPRSEASAFGCIDSDESGRITQFLEKPAHPP-------------GTPDDPNMTF-ASMGNYVFTTKVLVDSIRADAENSDSDHDMGGDIIPALVEAGEAGVYDFADNQVPGATDRDHGYWRDVGTIDAFYDAHMDLVSVHPVFNLYNKHWPIRGAAENLPPAKFAQGGLAQECIVGSGSILSAATVRNSVLSSNVVVDDGATVEGSVLMPGVRIGRGAVVRRAILDKNVVVGEGE 375
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_HAES2 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus somnus (strain 2336) GN=glgC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 61/217 (28.11%), Postives = 111/217 (51.15%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-----DRCKIVDAIISHGCFLRECSVQHSIV--GVRSRLESGVEF 599 A TV C+ + +AS++G+M +D + ++ F EKPK P + DT+L ASMG+Y+F D L ++L ++ S+DFG +I+P S+++ + A F+ YW D+GT+ SF+ +N+ L + + + YD R P + P+K D + +++IS GC + + + +S++ V+ + +S VE+ Sbjct: 160 AKCTVGCIEVPREQASEFGVMAVDENLKVKAFVEKPKDPPAIPNKPDTSL--------------ASMGIYVFDADYLYDVLMREVNTPYTSHDFGKDILPKSLEEEVLYAHPFSRSCMGRNTDGEIYWRDVGTLDSFWQSNIDLVSEHPQLDIYDQRWPIRGNPTQTYPSKFFYNKQDIKPVDNSLISGGCVITDAEISYSVLFDQVKVKADSKVEY 362
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_HAES1 (Glucose-1-phosphate adenylyltransferase OS=Haemophilus somnus (strain 129Pt) GN=glgC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 61/217 (28.11%), Postives = 111/217 (51.15%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-----DRCKIVDAIISHGCFLRECSVQHSIV--GVRSRLESGVEF 599 A TV C+ + +AS++G+M +D + ++ F EKPK P + DT+L ASMG+Y+F D L ++L ++ S+DFG +I+P S+++ + A F+ YW D+GT+ SF+ +N+ L + + + YD R P + P+K D + +++IS GC + + + +S++ V+ + +S VE+ Sbjct: 160 AKCTVGCIEVPREQASEFGVMAVDENLKVKAFVEKPKDPPAIPNKPDTSL--------------ASMGIYVFDADYLYDVLMREVNTPYTSHDFGKDILPKSLEEEVLYAHPFSRSCMGRNTDGEIYWRDVGTLDSFWQSNIDLVSEHPQLDIYDQRWPIRGNPTQTYPSKFFYNKQDIKPVDNSLISGGCVITDAEISYSVLFDQVKVKADSKVEY 362
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_THEMA (Glucose-1-phosphate adenylyltransferase OS=Thermotoga maritima GN=glgC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 61/232 (26.29%), Postives = 115/232 (49.57%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDH--NVQAFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIG 686 +AD T++C+ + AS +G+M D G+I+ F EKP P +AS+G+Y+F + L +L + S+DFG ++IP ++++ ++ AF F+ YW D+GT++S+++ANL L F YDP F+T +PP V K+ +++S G + +V +S++ ++ G +++++M + +++ V IG Sbjct: 144 EADGTIACMEVPIEEASRFGIMITDVDGRIVDFEEKPAKPRSN---------------------LASLGIYVFNYEFLKKVLIEDENDPNSSHDFGKDVIPRILRENLGSLYAFRFDGYWRDVGTLRSYWEANLELVLPVPPFNLYDPNWRFFTHTEEMPPAYVAPGSKVSTSLVSEGAEVYG-NVFNSVIFQGVKIGRGTVVKNSVIMTRTEIGENCYLENVIIAENVKIG 353
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_DEIDV (Glucose-1-phosphate adenylyltransferase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=glgC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 66/249 (26.51%), Postives = 118/249 (47.39%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSND---FGSEIIPASVKD-HNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 +AD+T++ PM S+A +G+M++D ++ +F EK PD G+ + L + SMG Y+F L LL +S D FG +IP ++ D ++VQA+ F N YW D+GTI ++++AN+ L +F+ Y+P P TS+ F PP K + + +++++ G + +V+ S++G R S + ++ S + + ++ V I G Sbjct: 148 RADVTIAAYPMPRSQAHQFGVMQVDAGWRVTEFLEKV--PDPPGLPENPDLS------------LTSMGNYIFSRRALEELLHTSISGQEDGFDFGHNVIPRALADGYHVQAYDFHRNPIPGQSNPNLYWRDVGTIDAYYEANMDLISINPEFDIYNPSWPLRTSSEFSPPAKFVHESDGRKGQAFNSVMAGGVIISGATVRDSVLGRNIRAHSYALIESCVLFDDVEVGRHSHLNRAIVDKNVKIPPG 382
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_ANADF (Glucose-1-phosphate adenylyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 61/224 (27.23%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLF------------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVDRCK--------IVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMM 614 AD+TV+ +P+ AS++G++++D G++I F EKPK +K M D T +ASMG YLF TD L+ + ++DFG I+ A + V + F YW D+G++ +++ AN+ L + F Y+ R P +T+ PP K D+++S GC + H I+ + R+ S +D+++ Sbjct: 143 ADLTVAAIPVPVEEASEFGIIEVDGDGRMIGFVEKPKA-GVKTMPGDPTRA------------LASMGNYLFTTDALVQEIVRDAGDTKSAHDFGKSIVAAMYERKRVFVYDFAKNVVPGQGDKERGYWRDVGSLDAYYQANMDLVDVDPSFSLYNDRWPIFTAQHNFPPVKFVFNNQTEGRVGYATDSLVSEGCIISGGHAHHCILSPKVRINSYSLVEDSIL 353 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |