FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGS_HORVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.522e-65 Identity = 118/231 (51.08%), Postives = 163/231 (70.56%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIP-ASVKDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQP-AKFEFYDPRTPFYTSARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQN 698 ADITV+ +PMD+ RA+ +GLMKID G+II+FAEKPKG LK M DTT+LGL A + PYIASMG+Y+ V+L LLR +P +NDFGSE+IP A+ VQA+L++ YWEDIGTI++F++ANL +T++P F FYD P YT R LPP+KV + D++I GC ++ C + HS+VG+RS + G +DT++MGADYY+TE++ L + +PIG G+N Sbjct: 226 ADITVAALPMDEERATAFGLMKIDEEGRIIEFAEKPKGEQLKAMMVDTTILGLEDARAKEMPYIASMGIYVISKHVMLQLLREQFPGANDFGSEVIPGATSTGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRHLPPSKVLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETEADKKLLAEKGGIPIGIGKN 456
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 4.522e-65 Identity = 117/228 (51.32%), Postives = 166/228 (72.81%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPA-KFEFYDPRTPFYTSARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 ADIT+S VP+DD +A + GLMKID G+I F+EKP+G L+ MQ DT++LGLS A PYIASMG+Y+F+ +VL NLL Y + DFG EIIP S DHN+QA+LF+DYWEDIGTI++F++ANLALT+QP+ F FY+ + P YT R+LPPTK+ + +++I GC +++C + HS++G+RSR+ES +DT++MG D+Y++ SE +L A ++ G G Sbjct: 154 ADITLSVVPVDDRKAPELGLMKIDAQGRITDFSEKPQGEALRAMQVDTSVLGLSAEKAKLNPYIASMGIYVFKKEVLHNLL-EKYEGATDFGKEIIPDSASDHNLQAYLFDDYWEDIGTIEAFYEANLALTKQPSPDFSFYNEKAPIYTRGRYLPPTKMLNSTVTESMIGEGCMIKQCRIHHSVLGIRSRIESDCTIEDTLVMGNDFYESSSERDTLKARGEIAAGIG 380
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGS_BRANA (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Brassica napus GN=AGPS1 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.718e-64 Identity = 114/231 (49.35%), Postives = 168/231 (72.73%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIP-ASVKDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPA-KFEFYDPRTPFYTSARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQN 698 ADITV+ +PMD+ RA+ +GLMKID G+II+FAEKPKG LK M+ DTT+LGL A + P+IASMG+Y+ +V+L+LLR +P +NDFGSE+IP A+ VQA+L++ YWEDIGTI++F++ANL +T++P F FYD P YT R+LPP+K+ + D++I GC ++ C + HS++G+RS + G +DT++MGADYY+T+++ L A+ +PIG G++ Sbjct: 233 ADITVAALPMDEKRATAFGLMKIDDEGRIIEFAEKPKGEQLKAMKVDTTILGLDDERAKEMPFIASMGIYVVSKNVMLDLLRDQFPGANDFGSEVIPGATDLGLRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVIGLRSCISEGAIIEDTLLMGADYYETDADRTLLAAKGSIPIGIGRD 463
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGS_ORYSJ (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=AGPS PE=2 SV=4) HSP 1 Score: 243.817 bits (621), Expect = 6.530e-64 Identity = 114/231 (49.35%), Postives = 163/231 (70.56%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVK-DHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPA-KFEFYDPRTPFYTSARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQN 698 +DITV+ +PMD+ RA+ +GLMKID G+I++FAEKPKG LK M DTT+LGL A + PYIASMG+Y+ +V+L LLR +P +NDFGSE+IP + VQA+L++ YWEDIGTI++F++ANL +T++P F FYD P YT R LPP+KV + D++I GC ++ C + HS+VG+RS + G +D+++MGADYY+TE++ L + +PIG G+N Sbjct: 227 SDITVAALPMDEKRATAFGLMKIDEEGRIVEFAEKPKGEQLKAMMVDTTILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGANDFGSEVIPGATNIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRHLPPSKVLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETEADKKLLGEKGGIPIGIGKN 457
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP2 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=glgC PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.528e-64 Identity = 117/229 (51.09%), Postives = 160/229 (69.87%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPAK-FEFYDPRTPFYTSARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQ 695 ADIT+S VP+ + A +GLMKID +G+++ F+EKP G LK MQ DT LGL A + PYIASMG+Y+F+ VLL+LL+ DFG EIIP + KD+NVQA+LF+DYW DIGTI++F++ANL LT+QP F FYD + P YT AR+LPPTKV + +++IS GC ++ C + HS++G+R+R+E+ +DTM+MGADYYQ + L K PIG G+ Sbjct: 144 ADITLSVVPVGEKVAPAFGLMKIDANGRVVDFSEKPTGEALKAMQVDTQSLGLDPEQAKEKPYIASMGIYVFKKQVLLDLLKEGKD-KTDFGKEIIPDAAKDYNVQAYLFDDYWADIGTIEAFYEANLGLTKQPIPPFSFYDEKAPIYTRARYLPPTKVLNADVTESMISEGCIIKNCRIHHSVLGIRTRVEADCTIEDTMIMGADYYQPYEKRQDCLRRGKPPIGIGE 371
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGL2_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.982e-62 Identity = 108/170 (63.53%), Postives = 138/170 (81.18%), Query Frame = 3 Query: 189 KFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQN 698 K+PYIA MGVY+F+ ++LLNLLR +P +NDFGSEIIPA+ ++ NV+A+LFNDYWEDIGTIKSFF+ANLAL EQP+KF FYD P YTS R LPP+ + KI D+IISHGCFL +C V+HS+VG+RSR+ S V +DT+M+GAD+Y+T++E LAE KVPIG G+N Sbjct: 1 KYPYIAGMGVYIFKKEILLNLLRWRFPTANDFGSEIIPAAAREINVKAYLFNDYWEDIGTIKSFFEANLALAEQPSKFSFYDASKPMYTSRRNLPPSMISGSKITDSIISHGCFLDKCRVEHSVVGIRSRIGSNVHLKDTVMLGADFYETDAERGDQLAEGKVPIGIGEN 170
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SYNPW (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain WH7803) GN=glgC PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.920e-57 Identity = 106/230 (46.09%), Postives = 158/230 (68.70%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASV-KDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPAK-FEFYDPRTPFYTSARFLPPTKVDRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXGQ 695 AD+TV+ +P+D +A +GLM+ D G+I++F EKPKG L M DT+ GLS A + PY+ASMG+Y+F D L +LL + P DFG E+IP ++ + +++++F+DYWEDIGTI +F++ANLALT+QP F FYD P YT R+LPP+K+ +I D+II G L+ CS+ HS++GVRSR+E V QD+++MG+D++++ SE A L +P+G G+ Sbjct: 145 ADLTVAALPVDAKQAEAFGLMRTDEDGRILEFREKPKGDSLLEMAVDTSRFGLSAESAKERPYLASMGIYVFSRDTLFDLLHQN-PTHKDFGKEVIPEALQRGDRLKSYVFDDYWEDIGTIGAFYEANLALTQQPTPPFSFYDAEFPIYTRPRYLPPSKLVDSQITDSIIGEGSILKSCSIHHSVLGVRSRVEDEVVLQDSLLMGSDFFESSSERAVLRERGGIPLGVGK 373
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_THERP (Glucose-1-phosphate adenylyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=glgC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.426e-26 Identity = 64/229 (27.95%), Postives = 121/229 (52.84%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN---DFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIG 686 AD+T++ P+D AS +G++ + G ++ F EKP+ P +ASMG+YLFR ++LL+L +P + DFG ++IP ++ V + F+ YW+D+GT++S+++AN+AL E K YDP +T + PP K+ + ++ +++S+GC + +V SI+ +++G +D+++M + + + ++ V IG Sbjct: 146 ADVTIAVQPVDWREASRFGVVIVAEDGWVVDFEEKPERPRSN---------------------LASMGIYLFRRNLLLDLFTRDHPDAPEFIDFGRDVIPYLIRTARVATYRFDGYWQDVGTVQSYWEANMALLEDEPKLNLYDPNWRIHTRSEERPPAKILEGATVIRSLLSNGCIVEGATVIRSILSPGVIVKAGAVVRDSIVMTDSVIGPGAVVDRCIIDKHVTIG 353
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC1_PSEA6 (Glucose-1-phosphate adenylyltransferase 1 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=glgC1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 66/219 (30.14%), Postives = 116/219 (52.97%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASD-YGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+T+ + + A++ +G+M+I++SG+++ F EKP P +P+ +ASMG+Y+F T+ LLN L+ S +DFG++I+P + D+ V AF F D YW+DIGT+ +F+ AN+ L E K + YD P +T + PP K R D+++S GC + ++ S++ V R+ S + +++++ Sbjct: 156 ADVTIGGIEVPVHEAANAFGVMQINKSGRVVSFDEKPDSPS-------------PLPEDPALA-LASMGIYVFNTEFLLNELQKDAHSLTSEHDFGNDIVPQCIADYEVHAFRFTDSLYGLKPYWKDIGTLDAFWQANIDLIEVTPKLDIYDDSWPIWTYQKQSPPAKFVFNNDNRRGSATDSMVSGGCVISGATIDRSLLFVDVRVHSYSKITESVIL 360
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_GRABC (Glucose-1-phosphate adenylyltransferase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=glgC PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.472e-23 Identity = 72/248 (29.03%), Postives = 119/248 (47.98%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 +AD+TV C+ + A+ +G+M++D +G+I F EKP P GM PD +ASMG+Y+F+T L ++LR + +DFG +IIP V++ A F+D YW D+GT+ S++ ANL LT + YD P +T PP K R VD++++ GC + S+ S++ R+ S + T+++ + + + + +R V I G Sbjct: 151 QADVTVGCIEVPREEATGFGVMQVDDTGRITAFLEKPSDP--PGMP--------GQPDIA----LASMGIYVFKTKFLFDVLRRDAADPDSKHDFGGDIIPDLVENGTAIAHRFSDSCVRSSKTAEAYWRDVGTLDSYWQANLDLTNVVPTLDLYDSGWPIWTYNEISPPAKFVYDDVGRRGMAVDSLVAGGCIVSGASLSRSLISTGCRVHSFSQLHGTVVLPYADIARSARLRNTVVDRGVRIPEG 384 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |