FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_PECCP (Glucose-1-phosphate adenylyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgC PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22 Identity = 70/222 (31.53%), Postives = 109/222 (49.10%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSY--PLSN-DFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A+ TV+C+P+ AS +G+M +D+ +I+ FAEKP P MPD +ASMG+Y+F D L LL + + P SN DFG ++IP V A F N YW D+GT+++++ ANL L + + YD P ++ LPP K DR +++++S GC + V HS++ R R+ S T+++ Sbjct: 161 AECTVACLPVPLEEASAFGVMSVDKQHRILDFAEKPDNPT-------------PMPDNPDMA-LASMGIYVFNADYLYQLLDADHNTPDSNHDFGQDLIPKIVSQRLAWAHPFTLSCVTSGEDENQYWRDVGTLEAYWRANLDLASVTPELDVYDRHWPIRSAIESLPPAKFVQDRSGSHGMTMNSLVSGGCIVSGSVVTHSVLFPRVRVNSFCSIDSTVIL 368
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHOBA (Glucose-1-phosphate adenylyltransferase OS=Rhodopirellula baltica GN=glgC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 69/246 (28.05%), Postives = 118/246 (47.97%), Query Frame = 3 Query: 3 RPKADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL--RSSYPLSN-DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV---------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPI 683 R AD+TV + + A +G+M++D ++++F EKP+ P L PD +ASMG+Y+F T L L ++ P S+ DFG IIP +++D V AF F D YW D+GT++++++AN+ L + YD + P + LPP K R + +D+I+ G + V+ S++G R+ S + +D+++ S I + ++ V I Sbjct: 163 RKGADVTVGALRVSREEARQFGVMQVDTDNRLVEFQEKPENPRPT----------LDDPDVC----LASMGIYVFNTRFLFERLCDDATQPDSDHDFGKNIIPGAIEDSQVFAFPFTDENRKRDAYWRDVGTLEAYYEANMDLVGVDPQLNLYDRQWPIRSFQPQLPPPKFVFGSEGRSSRRGEALDSIVCQGAIISGGCVRRSVIGTGCRINSYAQVEDSILFDDVNVGRHSRIRRAIIDKGVQI 394
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC2_ALHEH (Glucose-1-phosphate adenylyltransferase 2 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 68/242 (28.10%), Postives = 109/242 (45.04%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSY--PLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 AD+TV C+ + AS +G+M +D ++++F EKP P Q D L ASMG+Y+F L N L + +DFG +IIP+ + V AF F D YW D+GTI +F+ NL L + YD P +T LPP K R VD+++S GC + ++ S++ +E G +D +++ + + I + ++ + G Sbjct: 157 ADVTVGCLEVPVEEASAFGVMAVDGDNRVVRFQEKPADPPSIPGQSDRAL--------------ASMGIYIFNRAFLFNQLIADARKESDHDFGKDIIPSLIDQARVIAFPFRDAATGGQAYWRDVGTIDAFWRTNLELVGVNPQLNLYDKEWPIWTHQEQLPPAKFVFDDDDRRGMAVDSMVSGGCIISGAYLRRSLLFSSVVVEDGSRVEDAVILPEAHIEPGCRIRKAVIDKHCRLAAG 384
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC1_VIBPA (Glucose-1-phosphate adenylyltransferase 1 OS=Vibrio parahaemolyticus GN=glgC1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21 Identity = 65/222 (29.28%), Postives = 112/222 (50.45%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLFND----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV-----DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMG 620 KA +TVS + M AS +G++++D G++I F EKP P S+P F + SMG Y+F VL + L + S+DFG +IIP +V + F+ YW D+GTI +++ A++ L E+ A F Y+ + P +T LPP R +I+D+++ +G ++R ++ S++G RS + S + + +++G Sbjct: 142 KASLTVSALRMPLKEASQFGVIEVDAEGRMIGFEEKPANPK-------------SIPGEPDFALV-SMGNYVFEAQVLFSELVEDADNEASSHDFGKDIIPKMFPRGDVFVYDFSTNRISGEKEEVYWRDVGTIDAYWQAHMDLLEKDAPFSLYNRKWPLHTYYPPLPPATFTDSDNGRVQIIDSLVCNGSYVRGSRIEKSVLGFRSNIASACDISECILLG 349
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_NITOC (Glucose-1-phosphate adenylyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgC PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 66/220 (30.00%), Postives = 109/220 (49.55%), Query Frame = 3 Query: 9 KADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDH-NVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 +AD+TV C+ + A +G+M +D + ++ +F EKP+ P + D TL ASMG+Y+F L L ++ S+DFG +IIP+ ++ H V AF F+D YW D+GT+ +F++ANL L + YD P +T LPP K R VD+++S GC + + HS++ ++S E ++++ Sbjct: 156 EADMTVGCIHVPLKEAKAFGVMSVDENFRVTEFTEKPEHPQPSPGRSDETL--------------ASMGIYVFNAAFLYEQLIKNADAFNSSHDFGKDIIPSILRSHYRVIAFPFSDVQGGDPGYWRDVGTVDAFWNANLELIGVSPELNLYDEDWPIWTYQAQLPPAKFIFDNEDRRGMAVDSMVSGGCIIAGAWIGHSLLFSNVWVQSHTEVASSVIL 361
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_ERWCT (Glucose-1-phosphate adenylyltransferase OS=Erwinia carotovora subsp. atroseptica GN=glgC PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 67/222 (30.18%), Postives = 109/222 (49.10%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL---RSSYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A+ TV+C+P+ AS +G+M +D+ +I+ FAEKP P MPD +ASMG+Y+F D L LL R++ ++DFG ++IP V A F + YW D+GT+++++ ANL L + + YD P ++ LPP K DR +++++S GC + V HS++ R R+ S T+++ Sbjct: 161 AECTVACLPVPLEEASAFGVMSVDKQHRILDFAEKPDNP-------------TPMPDNPDMA-LASMGIYVFNADYLYQLLETDRNASDSAHDFGQDLIPKIVSQRLAWAHPFTLSCVTSGEDEHQYWRDVGTLEAYWRANLDLASVTPELDVYDRHWPIRSAIESLPPAKFVQDRSGSHGMTMNSLVSGGCIVSGSVVTHSVLFPRVRVNSFCSIDSTVIL 368
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC2_PSEA6 (Glucose-1-phosphate adenylyltransferase 2 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=glgC2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 67/218 (30.73%), Postives = 111/218 (50.92%), Query Frame = 3 Query: 12 ADITVSCVPMD-DSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTK-----VDRC-KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A +TVSC+P+ + A +G+M +D +I+ F EKP+ P + D T +ASMG Y+F T+ L L+ + DFG +IIP+ +KDH V A+ F++ YW D+GT+ SF+ AN+ L YD + P +T LPP K +RC +D+++S GC + +V+ S+ + S E ++++++ Sbjct: 156 AKMTVSCMPVPIEEAAGAFGVMSVDEDYRILGFEEKPENPT--PLPNDPTRC------------LASMGNYVFDTEFLFEHLKHDAQNEGSERDFGKDIIPSIIKDHPVFAYPFSNDDGEVSYWRDVGTLDSFWLANMELVSPKPPLNLYDKKWPIWTYQEQLPPAKFVWEEYNRCGAAIDSVVSGGCIISGATVRKSLCFSNVHVHSYSEIEESVLL 359
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHEFN (Glucose-1-phosphate adenylyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=glgC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 70/220 (31.82%), Postives = 111/220 (50.45%), Query Frame = 3 Query: 12 ADITVSCV--PMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A++TV C+ P+D++ A +G+M++D ++I F EKP P K + D T+ +ASMG Y+F T L L+ ++ DFG +IIPA +++H V AF F+ YW D+GT+ SFF AN+ L YD + P +T LPP K R VD+I+S GC + V+ ++ R+ S +D++++ Sbjct: 154 AEMTVCCLETPIDEA-AGAFGVMEVDSEHRVIGFEEKPAEP--KSIPSDPTMC------------LASMGNYVFNTKFLFEQLKKDANNEKSDRDFGKDIIPAIIENHKVFAFPFSSAVAGQPSYWRDVGTLDSFFQANMELLLPTPPLNLYDAKWPIWTYQEQLPPAKFVFDDDDRRGMAVDSIVSGGCIISGAKVKRCVLFDEVRVCSYSFVKDSVLL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB5 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=glgC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 70/220 (31.82%), Postives = 110/220 (50.00%), Query Frame = 3 Query: 12 ADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC VP+ ++ A +G+M++D +I+ F EKP+ P + L ASMG YLF T+ L + L+ + DFG +IIPA ++ HNV A+ F YW D+GT+ SF+ AN+ L YD + P +T LPP K R +D+I+S GC + +V+ S++ R+ S +D++++ Sbjct: 154 ADMTVSCLEVPIAEA-AGSFGVMEVDEEMRILGFEEKPQQPKHSPGNPEMCL--------------ASMGNYLFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVL 358
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_ROSDO (Glucose-1-phosphate adenylyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 67/247 (27.13%), Postives = 109/247 (44.13%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL---SNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 AD+TV C+ + AS +G+MK+D +I+ F EKP P D L ASMG+Y+F T+ L ++ + S+DFG +IIP V+ A F+ YW D+GT+ +F+ ANL LT+ + YD P +T + P K R V +++S GC + S++ ++ R S + + M + + +++ +R V I G Sbjct: 153 ADVTVGCIEVPRMEASGFGVMKVDTEDRILDFIEKPGDPPAMPGHPDQAL--------------ASMGIYVFETEYLFKIMEECAAVPGYSHDFGGDIIPTIVRGGKAVAHPFSRSCVRTVNEEAPYWRDVGTVDAFWQANLDLTDFKPALDLYDTEWPIWTYSELTAPAKFIHNEEGRRGSAVSSMVSGGCIISGSSLERCLLFTGVRTHSFSQLNGVVSMPYAIINRNARLTNVVVDRGVVIPQG 385 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |