FC923284
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SHEAM (Glucose-1-phosphate adenylyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=glgC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 65/220 (29.55%), Postives = 105/220 (47.73%), Query Frame = 3 Query: 12 ADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS---SYPLSNDFGSEIIPASVKDHNVQAFLFN-------DYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TV C VP+ ++ A +G+M++ +++ F EKP P + L ASMG Y+F T+ L + LR + DFG +IIP+ +++H V A+ F DYW D+GT+ +F+ AN+ L YD + P +T LPP K R D+I+S GC + V+ S++ R+ S E + +++ Sbjct: 156 ADMTVCCQEVPVAEA-AGSFGVMEVAEDMRVVGFEEKPANPSCLPHDPERCL--------------ASMGNYVFNTEFLFDQLRKDAENVSSERDFGKDIIPSIIREHKVFAYAFKSGLGAGQDYWRDVGTLDTFWQANMELLSPEPHLNLYDAKWPIWTYQEQLPPAKFVFDDEDRRGMATDSIVSGGCIISGAKVKRSVLFNEVRICSYSEVEGAVIL 360
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_ALTMD (Glucose-1-phosphate adenylyltransferase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=glgC PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 71/244 (29.10%), Postives = 119/244 (48.77%), Query Frame = 3 Query: 12 ADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLF------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAERKVPIGXG 692 A +TVSC VP++++ A +G+M +D + +I F EKP P + D T +ASMG Y+F T+ L LR + DFG +IIP+ + DH V A+ F N YW D+GTI SF++AN+ + + YD + P +T LPP K R + +++++S GC + +++ SI R+ S +D +++ + ++ ++ +R I G Sbjct: 156 AKMTVSCMSVPLEEA-AGAFGVMSVDENYRINGFEEKPANPT--PLPNDPTRC------------LASMGNYVFDTEFLFEQLRVDSENMGSQRDFGKDIIPSIIADHPVYAYPFEQSGGDNAYWRDVGTIDSFWEANMEMVAPVPQLNLYDRKWPIWTYQEQLPPAKFVWEDHDRRGEAINSVVSGGCIISGSTLRSSICFSNVRVHSYGLIEDAVILPDVEIKRHCKLKRVIIDRGCVIPEG 384
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SACD2 (Glucose-1-phosphate adenylyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=glgC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 3 Query: 12 ADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD+TVSC VP++++ A +G+M +D +II+F EKP+ P + TL ASMG Y+F T+ L + LR +DFG IIP + + V A+ F D YW D+GT+ SF++AN+ L Y+ P +T LPP K R VD+++S GC + V+ S++ + S E ++++++ Sbjct: 156 ADLTVSCIEVPIEEA-AGSFGVMTVDDDNRIIRFDEKPQRPTELANKPGYTL--------------ASMGNYVFNTEFLFDQLRKDAADPDSEHDFGKNIIPNIIAEKLVSAYRFRDHDTNETAYWRDVGTLDSFWEANMELVSPNPSLNLYNHDWPIWTYQTQLPPAKFVFDDDSRRGYAVDSMVSGGCIVSGGKVKSSLLFSDVHIHSYAEIEESVLL 360
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHILW (Glucose-1-phosphate adenylyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 69/220 (31.36%), Postives = 102/220 (46.36%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP---LSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVR----SRLESGV 593 AD+T+ C+ + A +G+M ++ +II F EKP P +PD F +ASMG+Y+F T LL+ LR S DFG +IIP VK+ A F YW D+GTI +++ AN+ LT + + YD P +T A PP K R +++S C + S+ +S++ GVR S+LE V Sbjct: 154 ADVTIGCLEVPRMEAVGFGVMHVNEKDEIIAFVEKPADPP-------------PIPDKPDFA-LASMGIYVFHTKFLLDALRRDAADPNSSRDFGKDIIPYIVKNGKAVAHRFAKSCVRSDFEHEPYWRDVGTIDAYWQANIDLTAIVPELDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSATSSVVSGDCIISGASLNNSLLFTGVRANSFSKLEGAV 359
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_SERP5 (Glucose-1-phosphate adenylyltransferase OS=Serratia proteamaculans (strain 568) GN=glgC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 65/222 (29.28%), Postives = 104/222 (46.85%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV--DRC----KIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 A TV+C+P+ AS++G+M++D + I++F EKP P D +L ASMG+Y+F D L LL S+ ++DFG ++IP A F YW D+GT+++++ ANL L + + YD P T LPP K DR +++++S GC + V HS++ R R+ S T+++ Sbjct: 161 AQCTVACLPVPRDEASEFGVMEVDENDLILEFLEKPSNPPPMPGNPDMSL--------------ASMGIYIFNADYLFQLLEEDMSTPGSTHDFGKDLIPKITAQKAAWAHPFTLSCVTSNPELPPYWRDVGTLEAYWRANLDLASVTPELDMYDRAWPIRTHMEPLPPAKFVQDRSGSHGMTMNSLVSGGCIVSGSVVVHSVLFPRVRVNSFCTIDSTVLL 368
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPS (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgC PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 65/217 (29.95%), Postives = 105/217 (48.39%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFN-----------DYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVRSRLESGVE 596 AD+TV C+ + S AS +G+M +D I F EKP P + D +L+ SMG+Y+F T L+ L ++ S+DFG +IIP VK A F+ YW D+GT+ +++ AN+ LT+ + + YD P +T PP K R + V +++S GC + S++H+++ GVR+ + +E Sbjct: 154 ADVTVGCLEVARSEASAFGVMDVDAKDVIRSFLEKPADPPAMPGKPDKSLV--------------SMGIYVFDTKFLIEELHRDAANPDSSHDFGKDIIPYIVKHGKAVAHHFDKSCRRSHAEDTSYWRDVGTVDAYWAANIDLTDIVPQLDLYDREWPIWTYGEITPPAKFVHDKDGRRGEAVSSLVSGGCIISGASLRHTLLFTGVRAHSYTHIE 356
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_RHIEC (Glucose-1-phosphate adenylyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 68/220 (30.91%), Postives = 102/220 (46.36%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVR----SRLESGV 593 AD+T+ C+ + A+ +G+M ++ +I F EKP P +PD F +ASMG+Y+F T LL+ LR + S DFG +IIP VK+ A F YW D+GTI +++ AN+ LT + + YD P +T A PP K R +++S C + S+ S++ GVR S+LE V Sbjct: 154 ADVTIGCLEVPRMEATGFGVMHVNEKDEIFAFIEKPADPP-------------GIPDKPDFA-LASMGIYVFHTKFLLDALRRDAADPTSSRDFGKDIIPYIVKNGKAVAHRFAKSCVRSDFEHEPYWRDVGTIDAYWQANIDLTAIVPELDIYDKSWPIWTYAEITPPAKFVHDDDDRRGSATSSVVSGDCIISGASLNKSLLFTGVRANSFSKLEGAV 359
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_AGRT5 (Glucose-1-phosphate adenylyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgC PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 68/220 (30.91%), Postives = 103/220 (46.82%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLR---SSYPLSNDFGSEIIPASVKDHNVQAFLFND-----------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIV--GVR----SRLESGV 593 AD+T+ C+ + A+ +G+M ++ +II F EKP P +P F +ASMG+Y+F T L+ LR + S DFG +IIP V+ A F D YW D+GTI +++ AN+ LT+ + YD P +T A PP K R V +++S C + ++ S++ GVR SRLE+ V Sbjct: 154 ADVTIGCLEVPRMEATGFGVMHVNEKDEIIDFIEKPADPP-------------GIPGNEGFA-LASMGIYVFHTKFLMEALRRDAADPTSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAKFVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAV 359
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_METCA (Glucose-1-phosphate adenylyltransferase OS=Methylococcus capsulatus GN=glgC PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 69/221 (31.22%), Postives = 109/221 (49.32%), Query Frame = 3 Query: 9 KADITVSC--VPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLL--RSSYPLSN-DFGSEIIPASVKDHNVQAFLFND-------YWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKV------DRCKIVDAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 KAD+T+ C VP+ D++A +G+M++D +I +F EKP P MP+ ASMG+Y+F T L L + P SN DFG +IIP ++ + V A+ F + YW D+GT+ S++ AN+ L + YD P +T PP K R VD+++S GC + V+HS++ R+ S D++++ Sbjct: 158 KADLTIGCMEVPLADAKA--FGVMQMDGEQRIRKFVEKPSDPP-------------PMPNRPDHA-AASMGIYIFNTAFLFEQLIKDADTPGSNHDFGMDIIPQVIQKYRVFAYRFRNAQSGVQAYWRDVGTVDSYWAANMELIGVDPELNLYDQEWPIWTYQAQTPPAKFVFDDDDRRGMAVDSMVSGGCIISGAEVRHSLLFSNVRVNSFSRVLDSVIL 362
BLAST of FC923284 vs. ExPASy Swiss-Prot
Match: GLGC_CLOCE (Glucose-1-phosphate adenylyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=glgC PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 65/207 (31.40%), Postives = 102/207 (49.28%), Query Frame = 3 Query: 12 ADITVSCVPMDDSRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLS---NDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFDANLALTEQPAKFEFYDPRTPFYTSARFLPPTKVDRCKIV-DAIISHGCFLRECSVQHSIVGVRSRLESGVEFQDTMMM 617 AD T+S + + AS YG+M +G+I +F EKPK P +ASMGVY+F L L S NDFG IIPA + D ++ A+ ++ YW D+GTI++F+++N+ L + +F +DP YT P + V +II+ GC + +V +SI+ + +E G QD+++M Sbjct: 147 ADATISVINVPYEEASRYGIMNCHENGKIYEFEEKPKNPKST---------------------LASMGVYIFTWSTLREYLIKDNECSDSVNDFGKNIIPAMLGDGKSMWAYQYSGYWRDVGTIQAFWESNMDLVSRVPQFNLFDPEWRIYTPNPVKPAHYIASSACVKKSIIAEGCSVHG-TVINSILFPGAYIEEGAVIQDSIIM 331 The following BLAST results are available for this feature:
BLAST of FC923284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923284 ID=FC923284; Name=FC923284; organism=Citrus clementina; type=EST; length=698bpback to top |