FC923292

Overview
NameFC923292
Unique NameFC923292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.300e-24
Identity = 60/142 (42.25%), Postives = 91/142 (64.08%), Query Frame = 3
Query:  264 ITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELR--GEKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLSEHLR--GSGRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            +T  K+  F+++EL++AT NF     +G+GGFG V+   +    +  AIK++D   +Q  REF+ E+  L+   H NLV+LIG+C EG    LVYEY+  G+L +HL    SG+ PL W++R++IA  +ARGLEY+H+   P
Sbjct:   83 VTGKKAQTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTP 224          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.310e-24
Identity = 62/135 (45.93%), Postives = 86/135 (63.70%), Query Frame = 3
Query:  270 VDKSVEF--SYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEKAAIKKMDMQAS----REFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSG-RDPLPWSSRVQIALDSARGLEYIH 650
            +D+ V +  S   L +ATDNFS   K+G+G FG+VYY  ++  K    K+    S    R+F+ E+ +L+ +HH NLV LIGYC E     LVYEY+ NG+L +HL GS    PL W +R+QIA D+A+GLEY+H
Sbjct:  588 LDEGVAYFISLPVLEEATDNFSK--KVGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLH 720          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.629e-24
Identity = 59/143 (41.26%), Postives = 92/143 (64.34%), Query Frame = 3
Query:  252 SLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            S N   + +  + +Y E+ K T+NF     +G+GGFG VY+  L G + A+K +     Q  +EF AE+++L  VHH +LV L+GYC +G +L L+YEY+ NG+L E++ G  G + L W +R+QIA+++A+GLEY+H    P
Sbjct:  562 SSNPSIITRERKITYPEVLKMTNNFE--RVLGKGGFGTVYHGNLDGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRP 702          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.352e-24
Identity = 66/161 (40.99%), Postives = 93/161 (57.76%), Query Frame = 3
Query:  195 QSGSDKT---VESTGPAAGTP-TSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELR-GEKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIH 650
            Q G+ KT   + S G  + +  T+L +I  + S       + +AT++F  +  IG GGFG VY  EL  G K A+K+ +    Q   EF  E+++L+   H +LV LIGYC E + + LVYEY+ENG L  HL GSG   L W  R++I + SARGL Y+H
Sbjct:  435 QDGNSKTWIPLSSNGTTSSSNGTTLASIASNSSYRIPLVAVKEATNSFDENRAIGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLH 595          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 59/131 (45.04%), Postives = 85/131 (64.89%), Query Frame = 3
Query:  288 FSYEELSKATDNFSMSHKIGQGGFGAVYYAEL-RGEKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            F++EELSK T+NFS ++ +G GG+G VY   L  G+  AIK+     MQ + EF  E+++L+ VHH N+V+L+G+C +     LVYEYI NG+L + L G     L W+ R++IAL S +GL Y+HE   P
Sbjct:  622 FTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADP 752          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 59/136 (43.38%), Postives = 87/136 (63.97%), Query Frame = 3
Query:  276 KSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRG-EKAAIKKMDM---QASREFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLSEHLRGSGRDPL-PWSSRVQIALDSARGLEYIHEHTVP 665
            K  +F+Y E++K T+NF     +G+GGFG V +  + G E+ A+K +     Q  +EF AE+ +L  VHH NLV L+GYC EG  L L+YE++ NG+L +HL G G  P+  W +R++IA ++A GLEY+H    P
Sbjct:  566 KKRKFTYSEVTKMTNNFG--RVVGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTP 699          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 60/153 (39.22%), Postives = 94/153 (61.44%), Query Frame = 3
Query:  222 STGPAAGTPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRGEKAAIKKMD---MQASREFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            +TG       S ++  + K  +F+Y E+ K T NF     +G+GGFG VY+  L   + A+K +     Q  +EF AE+++L  VHH +LV L+GYC +G +L L+YEY+E G+L E++ G    + L W +R+QIA+++A+GLEY+H    P
Sbjct:  538 TTGTVKSDARSSSSSIITKERKFTYSEVLKMTKNFE--RVLGKGGFGTVYHGNLDDTQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRP 688          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 9.602e-24
Identity = 58/129 (44.96%), Postives = 87/129 (67.44%), Query Frame = 3
Query:  288 FSYEELSKATDNFSMSHKIGQGGFGAVYYAELR-GEKAAIKKM---DMQASREFLAELKVLTHVHHLNLVRLIGYCVEGS--LFLVYEYIENGNLSEHLRGSGRDP--LPWSSRVQIALDSARGLEYIH 650
            FSYEEL +AT+NF  S ++G GGFG VYY +L+ G   A+K++   + + + +F  E+++LT + H NLV L G   + S  L LVYEY+ NG L++HL G   +P  LPWS R++IA+++A  L+Y+H
Sbjct:  332 FSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFGCSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLH 460          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.254e-23
Identity = 62/146 (42.47%), Postives = 93/146 (63.70%), Query Frame = 3
Query:  246 PTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRG-EKAAIKKMDMQAS---REFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            P S     V K+  FSY ++   T+NF     +G+GGFG VY+  + G E+ A+K +   +S   ++F AE+++L  VHH NLV L+GYC EG +L L+YEY+ NG+L EH+ G+  R  L W +R++I ++SA+GLEY+H    P
Sbjct:  554 PRSSEPAIVTKNRRFSYSQVVIMTNNFQRI--LGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKP 697          
BLAST of FC923292 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.794e-23
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 3
Query:  243 TPTSLNAITVDKSVEFSYEELSKATDNFSMSHKIGQGGFGAVYYAELRG-EKAAIKKMDMQAS---REFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLSEHLRGS-GRDPLPWSSRVQIALDSARGLEYIHEHTVP 665
            T  S  +  + K+  F+Y E+   T+NF     +G+GGFG VY+  +   E+ A+K +   +S   +EF AE+++L  VHH NLV L+GYC EG +L L+YEY+ NG+L EH+ G  G   L W +R++I ++SA+GLEY+H    P
Sbjct:  567 TIRSSESAIMTKNRRFTYSEVVTMTNNFE--RVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKP 711          
The following BLAST results are available for this feature:
BLAST of FC923292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
RLCK7_ARATH3.300e-2442.25Probable serine/threonine-protein kinase RLCKVII O... [more]
Y1677_ARATH4.310e-2445.93Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH5.629e-2441.26Probable LRR receptor-like serine/threonine-protei... [more]
Y5597_ARATH7.352e-2440.99Probable receptor-like protein kinase At5g59700 OS... [more]
Y5977_ARATH9.602e-2445.04Probable leucine-rich repeat receptor-like protein... [more]
Y5596_ARATH9.602e-2443.38Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH9.602e-2439.22Probable LRR receptor-like protein kinase At1g5189... [more]
Y1839_ARATH9.602e-2444.96Probable serine/threonine-protein kinase At1g18390... [more]
Y5182_ARATH1.254e-2342.47Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH2.794e-2341.50Receptor-like protein kinase At3g21340 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC31703C06EF StrClemenN Citrus clementina cDNA clone C31703C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923292 ID=FC923292; Name=FC923292; organism=Citrus clementina; type=EST; length=745bp
CAGATGCAAATGGTGTCTTTCCGGCCCTGGAGTCATCAAGCACAGGAATA
GCTGGTGGAGCTATTGCTGGCATATCTATAGCAGGAGTAGCTGGGTTGGC
TTTGCTTGCAGTTTGTGTGTATGTTGGATTTTACCGAAAGAAGAGGGTGA
AGAGGGCAGCATTGCTCTCAGCCACATCTCAAGATCTTTCCGTTCAGTCT
GGATCTGATAAAACTGTGGAATCTACTGGTCCAGCTGCTGGCACTCCCAC
ATCCCTTAATGCAATCACTGTGGACAAGTCGGTGGAATTCTCATATGAAG
AACTTTCCAAGGCAACTGATAATTTCAGTATGTCCCATAAAATTGGTCAA
GGTGGTTTTGGAGCTGTTTACTATGCAGAGCTGAGAGGAGAGAAAGCTGC
TATAAAAAAGATGGATATGCAAGCATCGAGGGAATTTCTTGCTGAATTGA
AGGTTCTAACGCACGTTCATCACTTGAACTTGGTGCGCCTAATTGGATAC
TGTGTTGAAGGTTCTCTTTTCCTTGTTTATGAATACATTGAGAATGGCAA
CTTAAGCGAACATTTACGTGGATCAGGTAGGGATCCTCTGCCATGGTCTT
CTAGGGTGCAAATTGCTCTTGATTCAGCAAGAGGTCTGGAGTATATTCAT
GAGCACACAGTCCCTGTTTATATCATCGGGATATTAATCAGCAATATATT
GATAGACAGAACTTCCATGCAAGGTGCTGACTTGGATTACGAACT
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