FC923394

Overview
NameFC923394
Unique NameFC923394
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 78/225 (34.67%), Postives = 120/225 (53.33%), Query Frame = 2
Query:   11 HPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGS--ALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA-ITDGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFXXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSLIPLV 676
            H N++ L G+    + R +VY  M N S+  +L   ++G   +L W+ R+ IAL  ARGL YLHE CNP +IHRD+K++NILLD  F A + DFGLA + D   +     + GT+G++APEYL  G+ ++K+DV+ F               +      + ++   +  L    +   +V   +K   D   L +V  +A+LC QP  + RP ++ VL  L  LV
Sbjct:  353 HRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRD-NYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGLV 576          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 75/221 (33.94%), Postives = 115/221 (52.04%), Query Frame = 2
Query:    5 IHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA-ITDGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFXXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSL 664
            I+H NVV LLG     +   +VYE + N +L   LHG    S+LTW  R+KIA++ A  L YLH   +  +IHRD+K++NILLD    AK++DFG + +    + +    + GTLGY+ PEY   G L +KSDVY+F                  P   + +V++     T  ++L  I+G  + +  +LK + + A +A  C +     RP + +V   L
Sbjct:  460 INHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHLVSY-FATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKL 679          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 77/222 (34.68%), Postives = 113/222 (50.90%), Query Frame = 2
Query:    5 IHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNL--KLSGTLGYVAPEYLLDGKLTDKSDVYAFXXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSL 664
            + H N+V L G+S  +  R +VYE + N SLD  L  P     L W  R  I +  +RGL YLHE     +IHRDLKSSN+LLD +   K+SDFG+A      N   +  ++ GT GY+APEY + G+ + K+DVY+F                L   +   + T+A     + + +  ++ PV+  T D K   Q   +A+ CVQ   + RP +  V+  L
Sbjct:  384 LQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSG-LGLGEGTDLPTFAWQNWIEGTSM-ELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSML 603          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.519e-28
Identity = 76/223 (34.08%), Postives = 112/223 (50.22%), Query Frame = 2
Query:    5 IHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG--SQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAF-XXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSL 664
            + H N+V LLGY    + + +VYE + N+SLD  L  P+    L W  R KI    ARG+ YLH+     +IHRDLK+ NILLD+  N K++DFG+A   G      N  ++ GT GY+APEY + GK + KSDVY+F                        ++VT+   +L        +V P          + +   +A+LCVQ  A+ RP ++ ++  L
Sbjct:  395 LQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTW-RLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQML 616          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.519e-28
Identity = 73/219 (33.33%), Postives = 112/219 (51.14%), Query Frame = 2
Query:    5 IHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG--SQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFXXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVL 655
            + H N+V LLG+    + R +VYE + N+SLD  L  P+    L W  R KI    ARG+ YLH+     +IHRDLK+SNILLD+  N K++DFG+A   G     +N  ++ GT GY++PEY + G+ + KSDVY+F                        +V++A   L    +   +V P I        + +   + +LCVQ   + RP ++ ++
Sbjct:  388 LQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAW-GLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIV 605          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 76/221 (34.39%), Postives = 116/221 (52.49%), Query Frame = 2
Query:    5 IHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDG-SQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFXXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSL 664
            + H ++V L+GY   +    +VYE M N      L+G +  + LTW  R++I + +ARGL YLH      +IHRD+KS+NILLD    AK++DFGL+      QN  +  + G+ GY+ PEY    +LTDKSDVY+F                  P +  ++  WAM Q   +  L  I+ P +  T++ + + + A  A  C++     RP + DVL +L
Sbjct:  577 LRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNL-APLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAM-QWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRPTMGDVLWNL 795          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 76/220 (34.55%), Postives = 123/220 (55.91%), Query Frame = 2
Query:   11 HPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLA-ITDGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAF-XXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSL 664
            H N++ L+GY A    R +VY  M N S+  +L       AL W+ R KIA+  ARGL YLHE C+P +IHRD+K++NILLD  F A + DFGLA + +   +     + GT+G++APEYL  G+ ++K+DV+ F                  + +Q  +++ W + +L    K+  +V   + +T D   + ++  VA+LC Q   ++RP +++V+  L
Sbjct:  353 HRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAKP---ALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEW-VRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQML 568          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 77/222 (34.68%), Postives = 116/222 (52.25%), Query Frame = 2
Query:    5 IHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNP-AVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKN-NLKLSGTLGYVAPEYLLDGKLTDKSDVYAFXXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSL 664
            I H ++V L GY   +    +VYE ME  +L   L+G S+  +LTW  R++I +  ARGL+YLH   +  A+IHRD+KS+NILLD    AK++DFGL+        N ++ + GT GY+ PEYL   KLT+KSDVYAF                  P +  ++  W M     +  +  I+ P +   ++   L +   +A  C++     RP + DV+  L
Sbjct:  539 IRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYG-SNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVM-FCKSKGTIDEILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDL 758          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 75/220 (34.09%), Postives = 117/220 (53.18%), Query Frame = 2
Query:   11 HPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAITDGSQNKNNLK--LSGTLGYVAPEYLLDGKLTDKSDVYAFXXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKSTMDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSL 664
            H ++V L+GY   ++   ++YE MEN ++   L+G    S LTW  R++I +  ARGL YLH   +  VIHRD+KS+NILLD  F AK++DFGL+ T    ++ ++   + G+ GY+ PEY    +LTDKSDVY+F                  P +  ++  WAM +   + +L  I+   ++  +    L + A     C+      RP + DVL +L
Sbjct:  538 HRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPS-LTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAM-KWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNL 755          
BLAST of FC923394 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28
Identity = 79/222 (35.59%), Postives = 118/222 (53.15%), Query Frame = 2
Query:    5 IHHPNVVCLLGYSAHDDTRFIVYELMENRSLDIQLHGPSHGSALTWHMRMKIALDTARGLEYLHEHCNPAVIHRDLKSSNILLDSKFNAKLSDFGLAIT-DGSQNKNNLKLSGTLGYVAPEYLLDGKLTDKSDVYAFXXXXXXXXXXXXXXXKLAPAQCQSIVTWAMPQLTDRSKLPNIVGPVIKST-MDLKHLYQVAAVAVLCVQPGASYRPLITDVLHSL 664
            I H N+V L  YS       + Y+ +EN SL   LHGP+    L W  R+KIA   A+GL YLH  C+P +IHRD+KSSNILLD    A+L+DFG+A +   S++  +  + GT+GY+ PEY    +LT+KSDVY++               +      +S +   +   T  +++  +  P I ST  DL  + +V  +A+LC +   + RP +  V   L
Sbjct:  699 IKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSY------GIVLLELLTRRKAVDDESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVL 914          
The following BLAST results are available for this feature:
BLAST of FC923394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 326
Match NameE-valueIdentityDescription
Y5457_ARATH1.163e-2834.67Probable LRR receptor-like serine/threonine-protei... [more]
WAK1_ARATH1.163e-2833.94Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
CRK27_ARATH1.163e-2834.68Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK20_ARATH1.519e-2834.08Putative cysteine-rich receptor-like protein kinas... [more]
CRK10_ARATH1.519e-2833.33Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y4391_ARATH1.984e-2834.39Probable receptor-like protein kinase At4g39110 OS... [more]
Y2239_ARATH1.984e-2834.55Probable LRR receptor-like serine/threonine-protei... [more]
Y2232_ARATH1.984e-2834.68Probable receptor-like protein kinase At2g23200 OS... [more]
HERK_ARATH1.984e-2834.09Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
ERECT_ARATH1.984e-2835.59LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC31704E10EF StrClemenN Citrus clementina cDNA clone C31704E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923394 ID=FC923394; Name=FC923394; organism=Citrus clementina; type=EST; length=697bp
GTAAATTCACCACCCAAATGTTGTTTGTCTGTTGGGTTATAGTGCTCATG
ATGACACAAGGTTTATTGTTTATGAATTGATGGAAAATCGGTCCCTTGAT
ATTCAATTGCATGGTCCTTCTCATGGATCAGCATTGACTTGGCATATGCG
AATGAAAATTGCTCTTGATACCGCTAGAGGATTAGAATATTTACATGAGC
ACTGCAACCCTGCAGTCATTCATAGAGATCTGAAATCCTCCAATATACTT
CTAGATTCCAAGTTTAATGCTAAGCTCTCAGATTTTGGTCTTGCCATAAC
CGATGGATCCCAAAACAAGAACAATCTTAAGCTTTCGGGCACTTTGGGAT
ATGTGGCTCCCGAGTATCTTTTAGATGGTAAATTGACAGACAAGAGTGAT
GTCTATGCTTTTGGAGTTGTGCTTCTTGAACTTCTCTTAGGAAGAAGGCC
AGTGGAGAAACTGGCACCAGCTCAGTGCCAATCTATTGTCACATGGGCCA
TGCCTCAACTCACTGACAGATCTAAACTCCCAAACATTGTGGGTCCTGTG
ATTAAAAGTACAATGGATTTAAAGCATTTATACCAGGTTGCAGCTGTTGC
TGTGTTATGTGTGCAACCGGGAGCCAGTTATCGACCACTGATAACGGATG
TTTTGCACTCTCTTATCCCACTCGTTCCAGTGGAGCTTGGAAGAACT
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