FC923402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.320e-36 Identity = 84/232 (36.21%), Postives = 127/232 (54.74%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKP-MSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDIT-ESSKVSIP--TGVSPSQRIKMENFRKKHMTYSYCYD 684 + L LD+ GS S +L G IKL +AG V A+Y+S+ HDEIDFEFLGN G+ + I TN+Y G + RE+++ WF+P++ FH Y+I W S++++++DG PIR F+ S G +P K M ++A++W+ DWAT GG+ + N+ AP+V E + C + D T S+ + P + ++ SQ KM+ R M Y YC D Sbjct: 49 LRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSSTG---STHDEIDFEFLGNATGQPYTIHTNLYAQGKGN--REQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVSIKQCVDPTIRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKD 275
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26 Identity = 71/230 (30.87%), Postives = 120/230 (52.17%), Query Frame = 1 Query: 1 VHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRKKHMTYSYCYDQ 687 + L+LD+ +GSGF S +Y G+F+ IK P + GV+ +FY+ + HDE+ F+ LG G + + TN+Y G G+++R+ LWFDP+ D+H YS LW +Q++FY+D PIR + + + +P+ + M L ++ +GS ++ K PY+ +F + GC + KC T+ +S ++ N RK ++ Y YC D+ Sbjct: 45 LQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRS---SRHDELCFQILGK-NGPPYLLNTNMYLYGEG--GKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDV--YYPSVQTMFLMGSVQNGS---------IIDPKQMPYIAKFQASKIEGCKTE--FMGIDKC--TDPKFWWNRKQLSSKEKTLYLNARKTYLDYDYCSDR 253
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: CRH1_YEAST (Probable glycosidase CRH1 OS=Saccharomyces cerevisiae GN=CRH1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 48/147 (32.65%), Postives = 72/147 (48.98%), Query Frame = 1 Query: 88 LPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSD---------WATNGGKYRVNYKYAPY 501 L A G+V +FY+ + D+ DEID E++G G N + Q+N + G T+ ++ P+D FH Y++ W + +Y+DG +R T+S G +P PM L IW G D WA GG+ NY AP+ Sbjct: 113 LKAANGTGIVSSFYLQSDDL-----DEIDIEWVG---GDNTQFQSNFFSKGDTTTYDRGEFHGVDTPTDKFHNYTLDWAMDKTTWYLDGESVRVLSNTSSEG--YPQSPMYLMMGIWAGGDPDNAAGTIEWA--GGE--TNYNDAPF 245
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.343e-12 Identity = 54/156 (34.62%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 43 SHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGS---DWATNGGKYRVNYKYAPY 501 S ++Y +G + S+K PA T G+V +F+ G DEID EFLG K +Q N Y NG G E+ +L FD S FH Y+ W I +Y+DG+ K TA+ + P+ P + +W+G+ DW G N YA Y Sbjct: 89 STNIYGYGLYEVSMK-PAKNT-GIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVG--GHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV----LKHTAT--ANIPSTPGKIMMNLWNGTGVDDWL--GSYNGANPLYAEY 229
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 53/150 (35.33%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 55 YLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDGSDWATNGGKYR-VNYKYAPY 501 Y +G + S+K PA T G+V +F+ G DEID EFLG K +Q N Y NG G E+ NL FD S FH Y+ W I +Y+DG+ K TA+ + P+ P + +W+G+ + G Y N YA Y Sbjct: 94 YGYGLYEVSMK-PAKNT-GIVSSFFTYTGPSHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVG--GHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDGV----LKHTATT--NIPSTPGKIMMNLWNGTGVDSWLGSYNGANPLYAEY 230
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: XYND_RUMFL (Xylanase/beta-glucanase OS=Ruminococcus flavefaciens GN=xynD PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11 Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 1 Query: 25 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDG---SDW--ATNG 465 +G F +++ Y +G++ S++ A GVV +F+ G + DEID E LG ++Q N Y NG E+ Y+L FD S+ +H Y W + I +Y+DG RE R D P P + W G DW A NG Sbjct: 635 SGGEFRTNNFYHYGYYECSMQ--AMKNDGVVSSFFTYTGPSDDNPWDEIDIEILGK---NTTQVQFNYYTNGQGK--HEKLYDLGFDSSEAYHTYGFDWQPNYIAWYVDG---REVYRATQ---DIPKTPGKIMMNAWPGLTVDDWLKAFNG 773
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.828e-11 Identity = 48/155 (30.97%), Postives = 66/155 (42.58%), Query Frame = 1 Query: 64 GFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPAKPMSLYATIWDG---SDWATNGGKY------RVNYKYAPY 501 G+ +++ A G+V +F+ G DEID EFLG K +Q N Y NG G E +NL FD S DFH Y W I FY+DG + R + P P + +W G +W G+Y + Y+Y Y Sbjct: 102 GYGYYEVRMKAAKNVGIVSSFFTYTGPSDNNPWDEIDIEFLGKDTTK---VQFNWYKNGVG--GNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGKKVYRGTR------NIPVTPGKIMMNLWPGIGVDEWL---GRYDGRTPLQAEYEYVKY 242
BLAST of FC923402 vs. ExPASy Swiss-Prot
Match: CRR1_YEAST (Probable glycosidase CRR1 OS=Saccharomyces cerevisiae GN=CRR1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 52/179 (29.05%), Postives = 77/179 (43.02%), Query Frame = 1 Query: 25 TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKNWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKR-----TASMGGDFPAKPMSLYATIWDGSDWATNGGKYR-----VNYKYAPYVTEFSDFVLH 531 TGS S +L+G AS+++ + GVV AF D+ DEIDFE+LG G Q+N Y G R +R+ + D +H Y I W +II+Y+DG R + S +P PM L +W G G ++++ +P + E F H Sbjct: 177 TGSLITSTRSFLYG--KASVRMKTARSRGVVTAF-----DLTSAIGDEIDFEWLG---GDLMTAQSNYYSQGHLDYTRMQRFPVGADTWATYHTYEIDWDPDRIIWYVDGKIARTVLKKDTWDPISKEYRYPQTPMRLEIAVWPGGSETNGPGTINWAGGLIDWENSPDIIEKGQFTAH 345 The following BLAST results are available for this feature:
BLAST of FC923402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923402 ID=FC923402; Name=FC923402; organism=Citrus clementina; type=EST; length=691bpback to top |