FC923451

Overview
NameFC923451
Unique NameFC923451
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.857e-24
Identity = 54/126 (42.86%), Postives = 75/126 (59.52%), Query Frame = 2
Query:  122 SYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG---ELSAPEIAAQL-QAQNVKAPMMLDRMLRLLVSHRVLECSVSG-----GERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWYII 472
            ++  AMQLA   VLPM  + AI+L + E IAKAG    +S+ E+ AQL +  N +AP+M+DR+  LL S+ VL C++        ER Y L PV K+ + N  G SL   + +  DKV MESWY +
Sbjct:    9 AFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYL 134          

HSP 2 Score: 38.5058 bits (88), Expect = 7.857e-24
Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEY 630
            LKD V++GGIPFN+ +GM  FEY
Sbjct:  134 LKDPVLDGGIPFNKAYGMSAFEY 156          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.252e-23
Identity = 53/118 (44.92%), Postives = 71/118 (60.17%), Query Frame = 2
Query:  134 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGE---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSGGE----RLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWY 466
            A+ LA     PM  ++A +L + +I +KAGE   +S  EIA+Q+ A+N  AP++LDRMLRLL SH VL C +  GE    R+Y   P+  Y  SN    SLG  + L  DKV MESW+
Sbjct:   25 AVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWF 142          

HSP 2 Score: 35.039 bits (79), Expect = 2.252e-23
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEY 630
            L D ++EGG+PF R HGM  F+Y
Sbjct:  144 LNDYILEGGVPFKRAHGMIQFDY 166          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.301e-22
Identity = 51/124 (41.13%), Postives = 73/124 (58.87%), Query Frame = 2
Query:  131 HAMQLAMGVVLPMATQAAIQLGVFEII---AKAGELSAPE-IAAQLQAQ--NVKAPMMLDRMLRLLVSHRVLECSVSGG----ERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWYII 472
            +AMQLA   +LPM  + A++LG+ E++   A AG+  APE + A+L     N  A  M+DRMLRLL S+ V++C +       ER Y+  PV K+   N+DG S+     +  DKV MESWY +
Sbjct:   19 YAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYL 142          

HSP 2 Score: 41.5874 bits (96), Expect = 5.301e-22
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEYASGNP 645
            LKDAV++GGIPFN+ +GM  FEY   +P
Sbjct:  142 LKDAVLDGGIPFNKAYGMTAFEYHGTDP 169          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.357e-21
Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 2
Query:  131 HAMQLAMGVVLPMATQAAIQLGVFEII---------AKAGELSAPEIAAQLQAQ-NVKAPMMLDRMLRLLVSHRVLECSVSGG-----ERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWYII 472
            +A+QLA   +LPM  + AI+LG+ E +          KA  L+  E+A +L ++ N  A  M+DRMLRLL S+ V+ C +  G      R YA  PV K+   N+DG S+     +  DKV MESWY +
Sbjct:   19 YALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYL 147          

HSP 2 Score: 40.0466 bits (92), Expect = 7.357e-21
Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEY 630
            LKDAV++GGIPFN+ +GM  FEY
Sbjct:  147 LKDAVLDGGIPFNKAYGMTAFEY 169          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.619e-20
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 2
Query:  131 HAMQLAMGVVLPMATQAAIQLGVFEIIAKAG-----ELSAPEIAAQLQA---QNVKAPMMLDRMLRLLVSHRVLECSVSGG----ERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWYII 472
            +AMQLA   +LPM  + AI+LG+ E++ K        L+  E+ A++ A       A  M+DRMLRLL S+ V+ C +       ER Y+  PV K+   N+DG S+     +  DKV MESWY +
Sbjct:   19 YAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYL 144          

HSP 2 Score: 40.0466 bits (92), Expect = 1.619e-20
Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 1
Query:  562 LKDAVMEGGIPFNRVHGMHIFEY 630
            LKDAV++GGIPFN+ +GM  FEY
Sbjct:  144 LKDAVLDGGIPFNKAYGMTAFEY 166          
BLAST of FC923451 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.811e-18
Identity = 45/120 (37.50%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  122 SYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG---ELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWYII 472
            +Y   + L+  + LPMA +AAI+L VFEII++AG   +LS  +I A++  +N  A + LDR+LR+L +  +L  S +   R+Y LN  S+  V+++D  S+   +    DK  +ES+Y I
Sbjct:   38 NYLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTTKSGRVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNI 157          

HSP 2 Score: 33.8834 bits (76), Expect = 6.811e-18
Identity = 15/25 (60.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  562 LKDAVMEGG-IPFNRVHGMHIFEYA 633
            +KD V+E G IPF+R HGM  F+YA
Sbjct:  157 IKDVVLEEGVIPFDRTHGMDFFQYA 181          
The following BLAST results are available for this feature:
BLAST of FC923451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
COMT1_ZINEL7.857e-2442.86Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
IMT1_MESCR2.252e-2344.92Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_SACOF5.301e-2241.13Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
OMT1_ORYSJ7.357e-2138.76Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_MAIZE1.619e-2038.10Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
SMT_COPJA6.811e-1837.50(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]

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Properties
Property NameValue
Genbank descriptionC31705B10EF StrClemenN Citrus clementina cDNA clone C31705B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923451 ID=FC923451; Name=FC923451; organism=Citrus clementina; type=EST; length=675bp
GATGCCAAGTAAAATAAAAGCAATAGTAGTCAACCAAAAATAAAGCAACG
AAACAATGGGTTCTTTATCGGAATATCAAAAACTCGCTCAGAAAAAACAT
GAAGAAGAAGAAGAAGAAGAGAGCTATTCACATGCCATGCAGCTAGCAAT
GGGCGTAGTGCTGCCCATGGCAACCCAGGCAGCTATTCAGCTTGGCGTTT
TTGAAATCATAGCCAAAGCTGGGGAGCTCTCGGCTCCAGAGATTGCAGCG
CAGTTACAAGCGCAAAACGTAAAAGCACCAATGATGCTAGACAGAATGCT
TAGGCTTCTGGTCAGCCACCGTGTGCTTGAGTGCTCTGTTTCTGGTGGCG
AGCGGCTGTATGCTCTCAACCCTGTGTCCAAATATTTTGTTAGTAATAAA
GATGGAGCCTCGTTGGGTCACTTTATGGCCTTGCCTCTCGACAAGGTTTT
CATGGAGAGCTGGTACATTATTATTCTCTCTTTTTTTTTTTTTTTCCCCT
TTCGGGTCAAATCTATATAGTAGTCAATTTAAGTAATTTTAAAAATGCAT
GTAGGTTGGGATTGAAAGATGCAGTTATGGAGGGAGGAATACCATTCAAT
AGGGTGCATGGAATGCACATCTTTGAGTACGCTTCCGGAAACCCCGGTTT
ATGAAACTTATCACGAGGCATGTTC
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