FC923456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = 2 Query: 173 ALSTNSEGNALHALRSRF-KDPTNVLQSWDPTLVNP-CTWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD 658 +LS SEG L R+R DP L +W+ + + C+WF VTC +N V L+L ++ GTL PE+ QL L+ L L N +SG IP E + L +D+ N L G +P + + + L L+ NK G + + L L ++ N ++ D Sbjct: 27 SLSLESEGFVLLKFRARVDSDPHGTLANWNVSDHDHFCSWFGVTC-VDNKVQMLNLSGCSLGGTLAPELSQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLNGVVPPELNKVLTPENLLLSGNKFAGFMTVKFLRLQSLYKVQMNKNRELSSVSAD 189
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 64/193 (33.16%), Postives = 93/193 (48.19%), Query Frame = 2 Query: 185 NSEGNALHALRSRFKDPTNVLQSWDPTLVNPCTWFHVTCDSNN------------------------HVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESF 691 N++ AL +LRS T W+ +PC W V C+SN + L L + +SG+L ++ +L++L L N SG+IP+ L +L LV +++ N GEI F NL LK L L NN+L+GSIP +L L F+VSNN L G+IP + + F +SF Sbjct: 34 NADRTALLSLRSAVGGRTF---RWNIKQTSPCNWAGVKCESNRVTALRLPGVALSGDIPEGIFGNLTQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIP-DLDL--PLVQFNVSNNSLNGSIPKN--LQRFESDSF 218
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 278 CTWFHVTCDSNN---HVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 C W V C+SN H +RL G + +G+L L+ L L N +SG+IP + NL L S+ + N+ GE P SF L +L L +++N TGSIP + L+ L + NNG G +P Sbjct: 54 CNWVGVECNSNQSSIHSLRLP-GTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLP 180
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14 Identity = 46/119 (38.66%), Postives = 75/119 (63.03%), Query Frame = 2 Query: 296 TCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 T D++ HV++ + N+ GTL P++ +L +L+ ++L N I+G +P+E + +L + + N+L GEIPK F N SL +L L +N +G+IP+EL L LK +S+N L GT+P Sbjct: 95 TNDTDCHVVKFAFKDHNLPGTL-PQIVKLPYLREIDLAYNYINGTLPREWAS-SNLTFISLLVNRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLP 210 HSP 2 Score: 79.7221 bits (195), Expect = 1.706e-14 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 326 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 +DL + I+GTL P +L ++ L +N +SG+IPKE GN SL +D+ N G IP+ NL LK L L++NKLTG++P L L ++ F +++ L GTIP Sbjct: 128 IDLAYNYINGTL-PREWASSNLTFISLLVNRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIP 234 HSP 3 Score: 69.707 bits (169), Expect = 1.765e-11 Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 341 SNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 + +SG + E G L YL+L N SG IP+ELGNL L + + NKL G +P S A L+++ R+N+ +L+G+IP + L+ ++ +GL G IP Sbjct: 156 NRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIPSYIQNWKQLERLEMIASGLTGPIP 258
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14 Identity = 57/170 (33.53%), Postives = 82/170 (48.24%), Query Frame = 2 Query: 254 WDPTLVNPCTWFHVTCDS-------------NNHVIRLDLGN-----------SNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESF 691 WD +PC W V CD + H+ GN + ++G+L ++G L+ L L N SG+IP+ L +L +LV +++ +N+ GEI F NL LK L L NNKL+GS+ L L F+VSNN L G+IP + F +SF Sbjct: 52 WDVKQTSPCNWTGVLCDGGRVTALRLPGETLSGHIPEGIFGNLTQLRTLSLRLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFSGEISSGFKNLTRLKTLYLENNKLSGSL---LDLDLSLDQFNVSNNLLNGSIPKS--LQKFDSDSF 216
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14 Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 2 Query: 197 NALHALRSRFKDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKL-TGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 +A+ +L+ P++ S DP +PC W H+ C V R+ +G+S + GTL P++ L L+ LEL N+ISG +P L L SL + + N + F L SL+ + ++NN + IP L S L+ F ++ + G++P Sbjct: 30 SAMLSLKKSLNPPSSFGWS-DP---DPCKWTHIVCTGTKRVTRIQIGHSGLQGTLSPDLRNLSELERLELQWNNISGPVP-SLSGLASLQVLMLSNNNFDSIPSDVFQGLTSLQSVEIDNNPFKSWEIPESLRNASALQNFSANSANVSGSLP 177 HSP 2 Score: 68.5514 bits (166), Expect = 3.933e-11 Identity = 37/110 (33.64%), Postives = 65/110 (59.09%), Query Frame = 2 Query: 200 ALHALRSRFKDPTNVLQSWDPTLVNPCT-WFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANL 526 +L + S F P + +SW +PCT W + C SN ++ + L ++GT+ PE G ++ LQ + L +N+++G IP+EL L +L ++D+ NKL G++P +N+ Sbjct: 327 SLLLIASSFDYPPRLAESWKGN--DPCTNWIGIAC-SNGNITVISLEKMELTGTISPEFGAIKSLQRIILGINNLTGMIPQELTTLPNLKTLDVSSNKLFGKVPGFRSNV 433
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14 Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 317 VIRLDLGNSNISGTLGPEVGQ-LQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 ++ L+L + + G + +G+ + L YL + N+++G+IP+ G L SL +D+ N L G IP F NLK+L L LNNN L+G IP T + VF+VS+N L G +P Sbjct: 636 LVALNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSGGIPHDFVNLKNLTVLLLNNNNLSGPIPSGFATFA---VFNVSSNNLSGPVP 745 HSP 2 Score: 73.1738 bits (178), Expect = 1.597e-12 Identity = 48/171 (28.07%), Postives = 83/171 (48.54%), Query Frame = 2 Query: 185 NSEGNALHALRSRFKDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQH----LQYLELY-----------MNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 +S+ + L + DP ++L SW + C+WF V+CDS++ V+ L NISG+ E+ + + + LY ++G +P + +L L + + N GEIP ++ L+ L L N +TGS+P + T L +L+V ++ N + G IP Sbjct: 44 DSDKSVLLRFKKTVSDPGSILASWVEESEDYCSWFGVSCDSSSRVMAL-----NISGSGSSEISRNRFTCGDIGKFPLYGFGVRRDCTGNHGALAGNLPSVIMSLTGLRVLSLPFNSFSGEIPVGIWGMEKLEVLDLEGNLMTGSLPDQFTGLRNLRVMNLGFNRVSGEIP 209 HSP 3 Score: 72.0182 bits (175), Expect = 3.557e-12 Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 389 LQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFAN-LKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD 658 L+ L+ +N I G IP LG+L SLV++++ N+L+G+IP S + +L +L + NN LTG IP+ L L V D+S+N L G IP D Sbjct: 612 LKILDASVNQIFGPIPTSLGDLASLVALNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSGGIPHD 702
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14 Identity = 48/143 (33.57%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 230 DPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIR-LDLGNSNISGTLGPEVGQLQHLQYLEL-YMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 D +L SW+P + C W+ V CD H I L + + +SG + VG L L+ L +++++G+IP + LK L + + L G +P F+ LK+L +L L+ N L+G IP L+ L +L + N L G IP Sbjct: 46 DNPYILASWNPN-TDCCGWYCVECDLTTHRINSLTIFSGQLSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIP 187
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14 Identity = 55/183 (30.05%), Postives = 83/183 (45.36%), Query Frame = 2 Query: 188 SEGNALHALRSRFKDPTNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSN--------------------------ISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD 658 S+ AL ++ +P L +W + C W HV CD V + + +N +SG + + L +LQ+L + ++SG IP L ++SL S+D+ N L G IP SF++L +L+ L L +NKLTG IP L + +S N L G IP D Sbjct: 30 SDKQALMRVKQSLGNPAT-LSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRGQIPSAVAGLTALMSLSLFRLPGLSGPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPAGLVQ-GQFRSLILSYNQLTGPIPRD 210
BLAST of FC923456 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.228e-14 Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 326 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 L+L + I+G + + G L+ L + L N+++G IP+ + ++ L +D+ +N +EG IP+ N+K L L L+ N LTG IP L + S L V ++S N L GTIP Sbjct: 188 LELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIP 296 HSP 2 Score: 78.5666 bits (192), Expect = 3.800e-14 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 326 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 652 LDL + I+G + E+G+L L L L N +SG+IP L +L L +++ +N + G IP F +LK L + L N+LTGSIP ++ + L D+S N + G IP Sbjct: 140 LDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIP 248 HSP 3 Score: 73.559 bits (179), Expect = 1.223e-12 Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 2 Query: 347 ISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP--VDGPFRSFPMESFENKITHGP 715 I+G + P + L L+ L+L N I+G+IP E+G L L +++ +N++ GEIP S +L LK L L N +TG IP + +L L + N L G+IP + G R ++ +N I GP Sbjct: 123 ITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHI-EGP 246 HSP 4 Score: 72.7886 bits (177), Expect = 2.085e-12 Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 2 Query: 326 LDLGNSNISGTLGPEVGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFEN 697 LDL ++I G + +G ++ L L L N ++G IP L + L ++ +N LEG IP F + L L L++N L+G IP L++ + D+S+N LCG IP PF SF + Sbjct: 236 LDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSD 359 The following BLAST results are available for this feature:
BLAST of FC923456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923456 ID=FC923456; Name=FC923456; organism=Citrus clementina; type=EST; length=719bpback to top |