FC923458
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24_DICDI (40S ribosomal protein S24 OS=Dictyostelium discoideum GN=rps24 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.801e-39 Identity = 78/117 (66.67%), Postives = 97/117 (82.91%), Query Frame = 1 Query: 82 DTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKK 432 D AV +RTRK +TNRLLSRKQFV++V+HPG+ANVSK +LK +A++++V DP IF+F F+T FGGGKSTGFGLIYD++E AKK+EPKYRL R GL TK + SRKQ KE+KNR KK Sbjct: 2 DKAAVVVRTRKVLTNRLLSRKQFVVEVVHPGKANVSKKDLKTTIAKLHKVADPETIFLFGFKTDFGGGKSTGFGLIYDNLEIAKKYEPKYRLARAGLYTKPQTSRKQRKEKKNRLKK 118
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24_ICTPU (40S ribosomal protein S24 OS=Ictalurus punctatus GN=rps24 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.842e-39 Identity = 78/117 (66.67%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 91 AVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 441 +VTLRTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY+ P+ +FVF F+T FGGGK+TGF ++YDS++ AKK EPKYRL R+GL K + SRKQ KERKNR KK+RG Sbjct: 4 SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFKTQFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24_SPOFR (40S ribosomal protein S24 OS=Spodoptera frugiperda GN=RpS24 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.167e-38 Identity = 78/115 (67.83%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 97 TLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 441 T+RTRKFMTNRLL+RKQ V DVLHPG+ VSK E++EKLA+MY+V P+ +FVF F+T+FGGGKSTGF LIYD+++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+RG Sbjct: 7 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 120
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24_TAKRU (40S ribosomal protein S24 OS=Takifugu rubripes GN=rps24 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.991e-38 Identity = 80/122 (65.57%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 76 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRG 441 M DT VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY+ P+ +FVF FRT FGGGK+TGF ++YDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG Sbjct: 1 MNDT--VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLFEKKKTSRKQRKERKNRMKKVRG 119
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24_RHIRA (40S ribosomal protein S24 OS=Rhizomucor racemosus GN=RPS24 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.863e-36 Identity = 75/118 (63.56%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 91 AVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGV 444 AVT+RTRKF+TNRLL RKQ V+DV+HPG ANVSK EL+ K+ +MY+ D + VF F+THFGGGK+TGF LIYD+VE K FEPK+RL+R GL + RKQ KE+KNR KK RGV Sbjct: 23 AVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYKA-DKEVVSVFGFKTHFGGGKTTGFALIYDNVEALKNFEPKHRLVRIGLAEAPKGGRKQRKEKKNREKKFRGV 139
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24_ORYLA (40S ribosomal protein S24 OS=Oryzias latipes GN=rps24 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.434e-36 Identity = 76/123 (61.79%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 76 MADTKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEKSRKQLKERKNRAKKIRGV 444 M DT VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY+ P+ +FVF FRT FGGGK+TGF ++YDS++ AKK EPK+RL +GL K + SRKQ ER+NR KK+R + Sbjct: 1 MNDT--VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGLYEKKKTSRKQRTERQNRMKKVRSI 120
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24_YEAST (40S ribosomal protein S24 OS=Saccharomyces cerevisiae GN=RPS24A PE=1 SV=3) HSP 1 Score: 151.754 bits (382), Expect = 3.178e-36 Identity = 79/118 (66.95%), Postives = 96/118 (81.36%), Query Frame = 1 Query: 91 AVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEK-SRKQLKERKNRAKKIRG 441 AVT+RTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y+ + +A+ VF FRT FGGGKS GFGL+Y+SV AKKFEP YRL+R GL KVEK SR+Q K++KNR KKI G Sbjct: 4 AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVFGFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKKIFG 120
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24B_SCHPO (40S ribosomal protein S24-B OS=Schizosaccharomyces pombe GN=rps24b PE=2 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 4.151e-36 Identity = 74/120 (61.67%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 85 TKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEK-SRKQLKERKNRAKKIRG 441 ++AVT+RTRKFMTNRLL RKQ V+D+LHPG+AN+SK E++EKLA+MY+ D + F RTHFGGG+STGF LIYDS E+ KKFEP YRL+R G ++K +R+Q K+RKNR KK+ G Sbjct: 2 SEAVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGLRTHFGGGRSTGFALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKKVFG 120
BLAST of FC923458 vs. ExPASy Swiss-Prot
Match: RS24A_SCHPO (40S ribosomal protein S24-A OS=Schizosaccharomyces pombe GN=rps24a PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 3.514e-35 Identity = 72/120 (60.00%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 85 TKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKFEPKYRLIRNGLDTKVEK-SRKQLKERKNRAKKIRG 441 ++AVT+RTRKFMTNRLL RKQ V+D+LHPG+AN+SK +L+EKL +MY+ D +A+ F RTH+GGG++TGF LIYD VE KKFEP YRL+R G ++K +R+Q K+RKNR KK+ G Sbjct: 2 SEAVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGLRTHYGGGRTTGFALIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKKVFG 120 The following BLAST results are available for this feature:
BLAST of FC923458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923458 ID=FC923458; Name=FC923458; organism=Citrus clementina; type=EST; length=677bpback to top |