FC923472

Overview
NameFC923472
Unique NameFC923472
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.760e-24
Identity = 69/186 (37.10%), Postives = 97/186 (52.15%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQ--TNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDW--RKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCD-TXSNQGCNGGLMELAFEFIKKKG 675
            +E+  E    +LY  W+  +    +   DE + R+ VF  N+ ++     +  +  + L+LN+FADM+  EFA TY   K+   R  +    N  F Y       + VDW   KK    AVK+QG CGSCWAFS + A+E    I  N+   LSEQ+LVDC     N GCNGG M+ AFE++   G
Sbjct:   14 QEVSDEIDTANLYANWKMKYNRRYTNQRDEMY-RYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSLKVP--RTAKLNAANSNFQYKG-----AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYDNDGCNGGWMDSAFEYVADNG 191          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.217e-24
Identity = 52/80 (65.00%), Postives = 63/80 (78.75%), Query Frame = 1
Query:  436 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            +PS VDWR KG+V ++K+Q QCGSCWAFS +AAVE IN I T +L+SLSEQELVDCDT S+ GCNGG M  AF++I   G
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASH-GCNGGWMNNAFQYIITNG 79          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.217e-24
Identity = 70/186 (37.63%), Postives = 105/186 (56.45%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK--------PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIK 666
            E EL+++   WDL++R     T+ +++  +  R NV + ++    + ++  +         ++L +N   DMT+ E   T  G ++   R     R NGT      +S  P++VDWR+KG VT VKDQGQCGSCWAFS++ A+EG     T KL+SLS Q LV C   +N GC GG M  AFE+++
Sbjct:   24 EPELDAQ---WDLWKR-----TIQKAVQRQGGR-NVPEVDLGEEPEVHRCPQRGARLGKHSFQLAMNYLGDMTSEEVVRTMTGLRVPRSR----PRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC-VSNNNGCGGGYMTNAFEYVR 195          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.217e-24
Identity = 68/174 (39.08%), Postives = 98/174 (56.32%), Query Frame = 1
Query:  166 WDLYER-WRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKK 669
            WDL+++ +R  +  +  +DE  +R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+        +R N T       S  P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K
Sbjct:   27 WDLWKKTYRKQY--NSKVDELSRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQK 192          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.385e-23
Identity = 65/179 (36.31%), Postives = 97/179 (54.19%), Query Frame = 1
Query:  202 VSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTY-------AGSKIKHHRMFQGTRGNGTFMYGKVTSIPS-------------SVDWRKKGSVTAVKDQGQ-CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            V RS D++ +RF  F++N  H+ +T+K  +PY L LNKF+D+++ EF + Y         + +  H  F+           K+                  +++W +  +V+ +KDQG  CGSCWAFS+IA+VE +  +  NK   LSEQELV+CD  S+ GC GGL   A E+I  KG
Sbjct:  130 VHRSFDQRVQRFLTFRKNY-HIVKTHKPTEPYSLDLNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCD-KSSMGCAGGLPITALEYIHSKG 306          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.385e-23
Identity = 61/173 (35.26%), Postives = 99/173 (57.23%), Query Frame = 1
Query:  169 DLYERWRSHHTVSRSLD-EKHKRFNVFKQNVMHVHQTN--KMDKPYKL-KLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKKKG 675
            D +E +  ++  + + D EK+KR+++FK N+  ++  N    D P    K+NKF+D++  E  + + G  I               +       P   DWR++  VT++K+QG CG+CWAF+T+A+VE    +  N+L+ LSEQ+L+DCD+  + GCNGGL+  AFE I + G
Sbjct:   54 DYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPER---VSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCDSV-DMGCNGGLLHTAFEEIMRMG 222          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.385e-23
Identity = 69/190 (36.32%), Postives = 105/190 (55.26%), Query Frame = 1
Query:  115 VEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKK 669
            V  F  H +E+   +  W+L+++  S    S+ +DE  +R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+   R    +  N T ++       P S+D+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF+++++
Sbjct:   11 VVSFALHPEEILDTQ--WELWKKTYSKQYNSK-VDEISRRL-IWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSR----SHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENYGCGGGYMTNAFQYVQR 191          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.385e-23
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKK 669
            L  EE L   +E W+  H    +  +DE  +R  ++++N+ ++   N         Y+L +N   DMTN E      G K+        +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K
Sbjct:   16 LYPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQK 191          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.385e-23
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKK 669
            L  EE L   +E W+  H    +  +DE  +R  ++++N+ ++   N         Y+L +N   DMTN E      G K+        +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K
Sbjct:   16 LYPEEILDTHWELWKKTHRKQYNSKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASH----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQK 191          
BLAST of FC923472 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.809e-23
Identity = 69/181 (38.12%), Postives = 99/181 (54.70%), Query Frame = 1
Query:  145 LESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGT-FMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTXSNQGCNGGLMELAFEFIKK 669
            L  EE L   +E W+ ++     S  ++  R  ++++N+ H+   N         Y+L +N   DMT+ E      G K+   R    +R N T ++       P SVD+RKKG VT VK+QGQCGSCWAFS++ A+EG     T KL++LS Q LVDC    N GC GG M  AF++++K
Sbjct:   16 LYPEEILDTQWELWKKTYRKQYNSKGDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPASR----SRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQK 191          
The following BLAST results are available for this feature:
BLAST of FC923472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
CATL1_PARTE4.760e-2437.10Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
ERVB_TABDI6.217e-2465.00Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATK_CHICK6.217e-2437.63Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATK_CANFA6.217e-2439.08Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CYSP_THEAN1.385e-2336.31Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CATV_NPVLD1.385e-2335.26Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATK_RABIT1.385e-2336.32Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_MACMU1.385e-2338.46Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA1.385e-2338.46Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_BOVIN1.809e-2338.12Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC31705D10EF StrClemenN Citrus clementina cDNA clone C31705D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923472 ID=FC923472; Name=FC923472; organism=Citrus clementina; type=EST; length=677bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTNGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGG
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