FC923490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ARP2_SCHPO (Actin-related protein 2 OS=Schizosaccharomyces pombe GN=arp2 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16 Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +V DNGTG+VK G+A +NFP FP +VGRP+LR EE ++KD +VG A +R L V YP+ NGI++++E+M Sbjct: 6 IVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEM 82
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT5_ARATH (Putative actin-5 OS=Arabidopsis thaliana GN=ACT5 PE=5 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.443e-16 Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 D +VCDNGTG VK GFAG++ P +VFP VVGRP R+ ++ + KDT VG A R L + YP+ +G+V NW+DM Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDM 85
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT8_ARATH (Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 D+ +VCDNGTG VK GFAG++ P +VFP VVGRP R+ ++ KD VG A R L + YP+ +G+V NW+DM Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 D+ +VCDNGTG VK GFAG++ P +VFP VVGRP R+ ++ KD VG A R L + YP+ +G+V NW+DM Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRP--RHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTM_MOLOC (Actin, larval muscle-type OS=Molgula oculata PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.807e-15 Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +++ +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 6 EDQTAIVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 85
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTS_RAT (Actin, alpha skeletal muscle OS=Rattus norvegicus GN=Acta1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.972e-15 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 D +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTS_RABIT (Actin, alpha skeletal muscle OS=Oryctolagus cuniculus GN=ACTA1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.972e-15 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 D +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTS_PONAB (Actin, alpha skeletal muscle OS=Pongo abelii GN=ACTA1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.972e-15 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 D +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTS_PIG (Actin, alpha skeletal muscle OS=Sus scrofa GN=ACTA1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.972e-15 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 D +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTS_OREMO (Actin, alpha skeletal muscle OS=Oreochromis mossambicus GN=acta1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.972e-15 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 D +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84 The following BLAST results are available for this feature:
BLAST of FC923490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923490 ID=FC923490; Name=FC923490; organism=Citrus clementina; type=EST; length=394bpback to top |