FC923490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSI (Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNGTG VK GFAG++ P +VFP +VGRP R+ ++ KD VG A R L + YP+ +GIV NW+DM Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT1_MAIZE (Actin-1 OS=Zea mays GN=ACT1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNGTG VK GFAG++ P +VFP +VGRP R+ ++ KD VG A R L + YP+ +GIV NW+DM Sbjct: 9 IVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQAKRGILTLKYPIEHGIVNNWDDM 83
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT1_HALRO (Actin, muscle 1A OS=Halocynthia roretzi GN=MA1A PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +++ +VCDNG+G VK GFAG++ P +VFP VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 6 EDQTAIVCDNGSGLVKSGFAGDDAPRAVFPSTVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 85
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT1_ARATH (Actin-1/3 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNGTG VK GFAG++ P +VFP +VGRP R+ ++ KD VG A R L + YP+ +GIV NW+DM Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNGTG VK GFAG++ P +VFP +VGRP R+ ++ KD VG A R L + YP+ +GIV NW+DM Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT12_ARATH (Actin-12 OS=Arabidopsis thaliana GN=ACT12 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNGTG VK GFAG++ P +VFP +VGRP R+ ++ KD VG A R L + YP+ +GIV NW+DM Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNGTG VK GFAG++ P +VFP +VGRP R+ ++ KD VG A R L + YP+ +GIV NW+DM Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT_SCHDU (Actin OS=Scherffelia dubia PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 154 NVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD VG A R L + YP+ +G+V NW+DM Sbjct: 9 SALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDM 85
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT_COLSC (Actin OS=Coleochaete scutata PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 154 NVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD VG A R L + YP+ +GIV NW+DM Sbjct: 8 SALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTS_ORYLA (Actin, alpha skeletal muscle OS=Oryzias latipes GN=acta1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84 The following BLAST results are available for this feature:
BLAST of FC923490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923490 ID=FC923490; Name=FC923490; organism=Citrus clementina; type=EST; length=394bpback to top |