FC923490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTM_BRALA (Actin, muscle OS=Branchiostoma lanceolatum PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD VG A R L + YPV +GIV NW+DM Sbjct: 13 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPVEHGIVTNWDDM 87
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTM_BRAFL (Actin, muscle OS=Branchiostoma floridae PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD VG A R L + YPV +GIV NW+DM Sbjct: 11 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPVEHGIVTNWDDM 85
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTM_BRABE (Actin, muscle OS=Branchiostoma belcheri PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 160 VVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD VG A R L + YPV +GIV NW+DM Sbjct: 12 LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPVEHGIVTNWDDM 86
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTC_XENLA (Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN=actc1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTC_RAT (Actin, alpha cardiac muscle 1 OS=Rattus norvegicus GN=Actc1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTC_MOUSE (Actin, alpha cardiac muscle 1 OS=Mus musculus GN=Actc1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTC_HUMAN (Actin, alpha cardiac muscle 1 OS=Homo sapiens GN=ACTC1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTC_CHICK (Actin, alpha cardiac muscle 1 OS=Gallus gallus GN=ACTC1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACTC_BOVIN (Actin, alpha cardiac muscle 1 OS=Bos taurus GN=ACTC1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 145 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 + +VCDNG+G VK GFAG++ P +VFP +VGRP R++ ++ KD+ VG A R L + YP+ +GI+ NW+DM Sbjct: 5 EETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDM 84
BLAST of FC923490 vs. ExPASy Swiss-Prot
Match: ACT7_SOLTU (Actin-75 OS=Solanum tuberosum GN=AC75 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.447e-14 Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 142 MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 390 +D+ +VCDNGTG VK GFAG++ P +VFP +VGRP R+ ++ KD VG A R L YP+ +GIV NW+DM Sbjct: 4 VDDIQPLVCDNGTGMVKAGFAGDDSPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGILTWKYPIEHGIVNNWDDM 84 The following BLAST results are available for this feature:
BLAST of FC923490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923490 ID=FC923490; Name=FC923490; organism=Citrus clementina; type=EST; length=394bpback to top |