FC923493

Overview
NameFC923493
Unique NameFC923493
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923493 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 51/126 (40.48%), Postives = 69/126 (54.76%), Query Frame = 1
Query:  295 MKEALSNVLVPFYPVAGRLQKDERGRIEILCNGE-----GVLFSEAEASCV-IDDFGDFSQGSKLLPLVPSVDHAN-DISSSPLMLTQVTHFKCGGACIGLRLNHTLVDGLSAYHFVNSWAEITRG 651
            +K+ L  VL  FY +AG+L KD+ G   +  + E     GV FS A A+ V +DD       +K   LVP     N +  S PL+  QVT  K  G  +GL  NH ++DG S +HF++SWAEI RG
Sbjct:   65 LKDGLGLVLEDFYQLAGKLAKDDEGVFRVEYDAEDSEINGVEFSVAHAADVTVDDLTAEDGTAKFKELVPYNGILNLEGLSRPLLAVQVTKLK-DGLAMGLAFNHAVLDGTSTWHFMSSWAEICRG 189          
BLAST of FC923493 vs. ExPASy Swiss-Prot
Match: SALAT_PAPSO (Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12
Identity = 55/181 (30.39%), Postives = 85/181 (46.96%), Query Frame = 1
Query:  124 IHVRKSTMIRPSQETPKHC--LKVSDLDLLVPSVY-VPTVYFYGRGGPNEC--SFNFFDAGLMKEALSNVLVPFYPVAGRLQKDERGRIEILCNGEGVLFSEAEASCVIDDFGDFSQGS-KLLPLVPSVDHANDISSSPLMLTQVTHFKCGGACIGLRLNHTLVDGLSAYHFVNSWAEITR 648
            + V     I+P+  TP       +S LD   P  Y VP + FY     N    S +  D  L+K +LS  LV FYP+AGR+  +    I + C+ +G+ F + +    + +F   SQ    L  L+PS   +  +    L++ QV  F CGG  I   ++H + D  +   F+ SWA  T+
Sbjct:    9 VEVISKETIKPTTPTPSQLKNFNLSLLDQCFPLYYYVPIILFYPATAANSTGSSNHHDDLDLLKSSLSKTLVHFYPMAGRMIDN----ILVDCHDQGINFYKVKIRGKMCEF--MSQPDVPLSQLLPSEVVSASVPKEALVIVQVNMFDCGGTAICSSVSHKIADAATMSTFIRSWASTTK 183          
The following BLAST results are available for this feature:
BLAST of FC923493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DCR_ARATH3.166e-1340.48BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
SALAT_PAPSO5.970e-1230.39Salutaridinol 7-O-acetyltransferase OS=Papaver som... [more]

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Properties
Property NameValue
Genbank descriptionC31705F07EF StrClemenN Citrus clementina cDNA clone C31705F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923493 ID=FC923493; Name=FC923493; organism=Citrus clementina; type=EST; length=713bp
GACCGTCTTCAAGCTCATCAACAACGCTCATAAAAAACCAAATTTTGTTT
CAAGCTCGGACTCGCCCGTAGCTCCCAGTCACAGCCACTCCTTTCTGTCA
CTCCTGGCGCTAACACAATGGAAATCCACGTAAGGAAGTCTACAATGATA
CGCCCTTCTCAAGAAACACCCAAACATTGCCTAAAAGTTTCCGATTTGGA
CTTGTTAGTCCCATCAGTCTACGTGCCTACAGTGTACTTCTATGGGCGCG
GGGGCCCAAATGAATGTTCTTTCAATTTCTTTGATGCTGGTTTGATGAAG
GAGGCTTTGAGCAACGTTCTCGTGCCGTTTTATCCGGTGGCCGGAAGGTT
GCAAAAGGATGAAAGGGGAAGAATTGAGATACTGTGCAATGGAGAGGGAG
TTTTGTTCTCGGAGGCCGAAGCCAGTTGTGTTATTGATGATTTTGGTGAC
TTCTCACAAGGCTCAAAGCTTTTGCCGCTTGTTCCGTCTGTGGATCATGC
CAATGATATATCCTCTTCCCCACTCATGCTGACACAGGTAACTCATTTCA
AGTGTGGAGGCGCATGTATTGGACTCAGATTGAATCATACATTGGTAGAT
GGTCTTTCAGCATACCATTTCGTCAACTCTTGGGCTGAGATTACACGTGG
TGTTCCTATTACGATTCACCATTATTTGATCGAACTATACTAGGTGTTGG
GGTCCCAATTCTC
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