FC923496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: SXL_MEGSC (Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 50/135 (37.04%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 417 L+ LF GP+ + +D T GYGFV+F SE DA AI LN I + K I+V+ A + L NL++ NL + ++ L F +G IV I+RD TG RG FI ++ E + AI A+N Sbjct: 94 LYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSFARPGGEQLR-DTNLYVTNLSRSITDEQLETIFGKYGQIV-QKNILRDKHTGTPRGVAFIRFNKREEAQEAISALN 226
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: SXL_MUSDO (Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 417 T+ L+ LF GP+ + KD T GY FV+F SE DA AIK +N I + K ++V+ A +S+ NL++ NL + + L F +G IV I+RD TG RG F+ ++ E + AI A+N Sbjct: 114 TDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYARPGGESIK-DTNLYVTNLPRTITDDELEKIFGKYGNIV-QKNILRDKLTGRPRGVAFVRFNKREEAQEAISALN 250
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: SXL_CHRRU (Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN 417 T+ L+ LF GP+ + KD T GY FV+F SE DA AIK LN + + K ++V+ A +S+ NL++ NL + + L F +G IV I+RD TG RG F+ ++ E + AI A+N Sbjct: 97 TDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPGGESIK-DTNLYVTNLPRTITDDELEKIFGKYGNIV-QKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 233
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PU60B_DANRE (Poly(U)-binding-splicing factor PUF60-B OS=Danio rerio GN=puf60b PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 46/157 (29.30%), Postives = 82/157 (52.23%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANL----------FIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN-----GQYL 429 E+ + + F GP+ ++ + D VT H+G+ FVE+ E A A++ +N + L G+ I+V + ++ + L ++ ++ PD+ + + F AFG I + + R+P TG +GFGFI Y+ ++S A+ +MN GQYL Sbjct: 99 EDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPGSIGQAQPIIEQLAEEARAYNRIYVASIHPDLSDDDIKSVFEAFGKI-KSCMLAREPTTGKHKGFGFIEYEKPQSSLDAVSSMNLFDLGGQYL 254
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: SXL_CERCA (Sex-lethal homolog OS=Ceratitis capitata GN=SXL PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 64/212 (30.19%), Postives = 95/212 (44.81%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL--CNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPP 630 T+ L+ LF GP+ + +D T GY FV+F +E D+ AIK LN I + K ++V+ A +S+ NL++ NL + + L F +G+IV I+RD TG RG F+ ++ E + AI A+N ++ +TV A E HG A + SQ L G G +GGP PP Sbjct: 122 TDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYARPGGESIK-DTNLYVTNLPRTITDDQLDTIFGKYGMIV-QKNILRDKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLA-------EEHGK-----AKAQHYMSQLG----LIGGGGGGGGGGGGGGGGMGGPPPP 315
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 55/182 (30.22%), Postives = 89/182 (48.90%), Query Frame = 1 Query: 22 LFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKK---------------------------------SLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468 LF +AG V V V D+++ +G+GFV ++E+ + A + N ++ G+ IRVN K S+D +++GNL VD+ L + FS G +V + K++ D D+G SRGFGF++Y S + + AI+++NG L R I VS A ++ Sbjct: 107 LFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVV-DAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 63/216 (29.17%), Postives = 103/216 (47.69%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQD---KKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTV 612 TE + +++ G V V + ++R T ++ GY FVEF S +A A+ + N KPI ++N AS +KS+ + ++F+G+L P+V+E +Y F++ + KIM DP T SRG+GF+ + +A+ M GQ +R I V A K + H ++ + P P +++ P Q A AN TV Sbjct: 105 TEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAMSMNN------KPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLA---TPKSKAHVFSPVNVVPVSMP------PVGFYSAAQPVPQFADTANSTV 305
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 47/177 (26.55%), Postives = 95/177 (53.67%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD--------KKSLDVGAN----LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTKGERHGT 495 +E L + F G V+ V +R T+ +GYG+V+F ++ A+ AI+ + ++ G+PI + ++ KK D + LF+GNL + D +++ F+ G +V+ +I P+T +GFG++ + + E + A++A+ G+Y+ NR + + ++ + + G R G+ Sbjct: 181 DEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVS-VRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSPRPNNDGGRGGS 356
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: ELV1A_XENLA (ELAV-like protein 1-A OS=Xenopus laevis GN=elavl1-A PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQ-----------GYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYL--CNRQITVSYA 459 T++ L LF G V + + +D+V GYGFV + + +DA+ AI LN ++L K I+V+ A +S+ ANL+I L + +K + D F FG I+ N +++ D TG SRG FI +D ++ AI + NG + ITV +A Sbjct: 32 TQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIK-DANLYISGLPRTMTQKDVEDMFLPFGHII-NSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFA 195
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: ELAV4_XENTR (ELAV-like protein 4 OS=Xenopus tropicalis GN=elavl4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 91 GYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCN--RQITVSYAYKKDTK 477 GYGFV + +DA+ AI LN ++L K I+V+ A S+ ANL++ L + +K L FS +G I+T+ +I+ D TG SRG GFI +D ++ AI+ +NGQ ITV +A K Sbjct: 122 GYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR-DANLYVSGLPKTMTQKELEQLFSQYGRIITS-RILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANNPSQK 250 The following BLAST results are available for this feature:
BLAST of FC923496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923496 ID=FC923496; Name=FC923496; organism=Citrus clementina; type=EST; length=709bpback to top |