FC923496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: RB97D_DROME (Ribonucleoprotein RB97D OS=Drosophila melanogaster GN=Rb97D PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 64/226 (28.32%), Postives = 98/226 (43.36%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA----SQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGP 663 TEE L + Q G VV+V V +D T +G+GF+ + D A + I + GK + +A ++ + ++ LF+G L + DE+ L + F FG +V + K++ D TG RGF F+ +D ++A D AI +Q + Y + K N +K +P L + PSL Q G GG PP NG P Sbjct: 44 TEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHI-IDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVV-SVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI--------LKKQHAIKYVHVDVKKS-----------IYNLDKKEKQQPGGLANAIKPSLNQQQQQQG--GGQQPP----NGNMQAP 242
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: ELAV_DROVI (Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 46/153 (30.07%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDR----VTNLHQ---------GYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 420 TE+ + LF G + +V + +D+ + L+ GYGFV + +DA+ A+ VLN ++L K I+V+ A ++ GANL++ L + ++ L F+ FG I+T+ + + ++G GFI +D E + AI A+NG Sbjct: 197 TEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIK-GANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: ELAV_DROME (Protein elav OS=Drosophila melanogaster GN=elav PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 46/153 (30.07%), Postives = 80/153 (52.29%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDR----VTNLHQ---------GYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNG 420 TE+ + LF G + +V + +D+ + L+ GYGFV + +DA+ A+ VLN ++L K I+V+ A ++ GANL++ L + ++ L F+ FG I+T+ + + ++G GFI +D E + AI A+NG Sbjct: 161 TEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIK-GANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 312
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: RBM7_MOUSE (RNA-binding protein 7 OS=Mus musculus GN=Rbm7 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN-KASQDKKSLDVGANL---FIGNLDP 255 TEELL+ELF QAGPV+ V +PKD+ L Q + FV F+ E YA+ +LN IKL+G+PI++ ++ S D + +GNL P Sbjct: 22 TEELLFELFHQAGPVIKVKIPKDKDGKLKQ-FAFVNFKHEVSVPYAMNLLNGIKLFGRPIKIQFRSGSSHASQDASVSYPQHHVGNLSP 109
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 217 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 480 DV F+G L D++ L + FS +G ++ + KI+ D +TG SRGFGF+++ S EA AIEAMNGQ L R ITV+ A + + G Sbjct: 3 DVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDS-KIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSRRSDG 89
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PUF68_DROME (Poly(U)-binding-splicing factor half pint OS=Drosophila melanogaster GN=pUf68 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11 Identity = 53/191 (27.75%), Postives = 89/191 (46.60%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMN-----GQYL-CNRQITVSYAYKKDTKGERHGTPAERILAA 519 E+ + F GP+ ++ + D +T H+G+ FVE+ E A A++ +N + G+ I+V + S ++ KS + +++ ++ PD+ E+ + F AFG I+ K+ + +G+GFI Y + +A D AI +MN GQ L R IT A T T A AA Sbjct: 143 EDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQMNGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFN---RIYVASIHPDLSEEDIKSVFEAFGPIL-YCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLRVGRSITPPNALACPTTNSTMPTAAAVAAAA 329
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: NUCL_XENLA (Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 50/172 (29.07%), Postives = 85/172 (49.42%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK--DTKGERHG 492 TE+ L E+F +A ++ +P+++ +G+ F+EF S EDA A+ N ++ G+ IR+ + + LF+ L D E+ L + F N +I+ D DTG S+GFGF+ + + E + AA EAM + ++T+ +A K +G R G Sbjct: 427 TEDSLREVFEKA---TSIRIPQNQ--GRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQSKTLFVRGLSEDTTEETLKEAFDGS----VNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAKPKGDSQRGGRGG 589 The following BLAST results are available for this feature:
BLAST of FC923496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923496 ID=FC923496; Name=FC923496; organism=Citrus clementina; type=EST; length=709bpback to top |