FC923496

Overview
NameFC923496
Unique NameFC923496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_NEUCR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23
Identity = 62/163 (38.04%), Postives = 101/163 (61.96%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTKGE 483
            TE +L+ELF Q G V ++ V +D VT    GY +V + +  D + A++ LN   + G+P R+  + +D      GA N+FI NLD  +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+  AI+ +NG  L  +++ V +   KKD + +
Sbjct:   72 TEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNIL-SCKVAQD-EHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 232          

HSP 2 Score: 75.0998 bits (183), Expect = 4.152e-13
Identity = 55/179 (30.73%), Postives = 96/179 (53.63%), Query Frame = 1
Query:   13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--RHGTPAERILAAN 522
            L + F   G +++  V +D   N  +GYGFV + ++E A  AIK +N + L  K + V     K  +  K  ++ AN   +++ N++ +V ++   + F+ FG  VT+  + RD + G SRGFGF+++ + EA+  A++ +NG+    + + V  A KK  + E  R    A R+  AN
Sbjct:  164 LHDTFAAFGNILSCKVAQDEHGN-SKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRELFAKFGE-VTSSSLARDQE-GKSRGFGFVNFTTHEAAAQAVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKAN 339          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23
Identity = 58/153 (37.91%), Postives = 93/153 (60.78%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 456
            TE +L+E F  AGP++++ V +D  T    GY ++ F+   DA+ A+  +N   + G+PIR+  + +D      G  N+FI NLD  +D K LYDTFSAFG I++   +    D   SRG+GF+ +++ EA++ AI+ MNG  L +R++ V +
Sbjct:   23 TEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVC---DEYGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGH 172          

HSP 2 Score: 83.5741 bits (205), Expect = 1.167e-15
Identity = 56/165 (33.94%), Postives = 96/165 (58.18%), Query Frame = 1
Query:   13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK-DTKGE 483
            L++ F   G +++  V  D   +  +GYGFV F ++E A+ AI+ +N + L  + + V    S+ ++ L+ GA      N++I N   D+D+K L + FSAFG  ++  K+M D ++G SRGFGF++Y + E +  A+  MNG+ +  R + V  A K+ + +GE
Sbjct:  115 LYDTFSAFGDILSCKVVCDEYGS--RGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLS-VKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGE 275          

HSP 3 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 49/175 (28.00%), Postives = 92/175 (52.57%), Query Frame = 1
Query:    4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 477
            ++ L E+F   G  ++V V  D  +   +G+GFV + + E+A  A+  +N  ++ G+ + V +A                  Q++ +   G NL++ NLD  +D+  L   FS +G I T+ K+M +   G+S+GFGF+ + S E +  A+  MNG+ +  + + V+ A +K+ +
Sbjct:  204 DKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTI-TSTKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER 374          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23
Identity = 63/162 (38.89%), Postives = 98/162 (60.49%), Query Frame = 1
Query:    4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 483
            E  L+E+F   G V ++ V +D V+    GY +V +   ED + AI+ LN   + G+P R+  + +D  +   G  N+FI NL P +D K L+DTFSAFG I+ + K+  D D G S+ FGF+ Y++ EA+ AAIE++NG  L +R++ V  +  KKD + +
Sbjct:   80 EATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKIL-SVKVATD-DLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESK 239          

HSP 2 Score: 93.2041 bits (230), Expect = 1.473e-18
Identity = 74/238 (31.09%), Postives = 109/238 (45.80%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGP 663
            TE+   ELF   G + ++Y+ KD      +G+GFV F   E A  A++ LN  ++ G+ I V +A +                 +K S   G NLF+ NLD  +D + L + F  FG I T+ K+M D D G S+GFGF+ + + E +  AI  MN + +  + + V+ A +KD    R     ++I A N    Q +      A G P     P   G  G   PP    N    GP
Sbjct:  260 TEKEFEELFAPFGKITSIYLEKD-AEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTI-TSSKVMVD-DAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKDV---RRSQLEQQIQARNQMRMQNAAA----AGGLPGQFMPPMFYGQQGF-FPPNGRGNAPFPGP 486          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.426e-23
Identity = 57/153 (37.25%), Postives = 92/153 (60.13%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 456
            TE +L+E F  AGP++++ V +D  T     Y ++ F+   DA+ A+  +N   + G+PIR+  + +D      G  N+FI NLD  +D K LYDTFSAFG I++   +    D   SRG+GF+ +++ EA++ AI+ MNG  L +R++ V +
Sbjct:   23 TEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVC---DEHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGH 172          

HSP 2 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 56/159 (35.22%), Postives = 91/159 (57.23%), Query Frame = 1
Query:   13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468
            L++ F   G +++  V  D   +  +GYGFV F + E A+ AI+ +N + L  + + V    S+ ++ L+ GA      N++I N   D+D+K L + FSAFG  ++  K+M D D+G SRGFGF++Y + E +  A+  MNG+ +  R I V  A K+
Sbjct:  115 LYDTFSAFGNILSCKVVCDEHGS--RGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLS-VKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269          

HSP 3 Score: 73.559 bits (179), Expect = 1.208e-12
Identity = 64/242 (26.45%), Postives = 111/242 (45.87%), Query Frame = 1
Query:    4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGPISAVR 678
            ++ L E+F   G  ++V V  D  +   +G+GFV + + E+A  A+  +N  ++ G+ I V +A                  Q++ +   G NL++ NLD  +D+  L   F  +G I T+ K+M +   G+S+GFGF+ + S E +  A+  MNG+ +  + + V+ A +K+          ER     N   Q  R  T+ A   P L +  Q        +P  P     +  P++ VR
Sbjct:  204 DKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTI-TSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKE----------ERKAILTNQYMQ--RLATMRAMPGPLLGSFQQPANYFLSAMPQPPNRTFYSPNPVAPVR 429          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23
Identity = 61/163 (37.42%), Postives = 100/163 (61.35%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTKGE 483
            TE +L+ELF Q G V ++ V +D VT    GY +V + +  D + A++ LN   + G+P R+  + +D      G  N+FI NLD  +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+  AI+ +NG  L  +++ V +   KKD + +
Sbjct:   73 TEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNIL-SCKVAQD-ENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 233          

HSP 2 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 76/286 (26.57%), Postives = 117/286 (40.91%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDT----------------------------------------------GNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAP--QANGTVGGPVPP-----RPYANG 648
            T++    LF + G V +  + +D+ T   +G+GFV F S EDA  A++ LN  + +G+ + V +A                  Q+K S   G NL+I NLD +VD++ L   FS FG I T+ K+MRD  T                                              G S+GFGF+ + + + +  A+  MN + + N+ + V+ A +KD    R     + I A N    Q++      A  P     AP     G+  G +PP      PY  G
Sbjct:  254 TDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPI-TSAKVMRDSITEPGEEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVNNKPLYVALAQRKDV---RKNQLEQSIQARNQLRMQQA---AAAAGMPQQYMQAPVFYGPGSQPGFMPPAGGRGMPYPQG 532          

HSP 3 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 50/164 (30.49%), Postives = 87/164 (53.05%), Query Frame = 1
Query:   13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483
            L + F   G +++  V +D   N  +GYGFV + ++E A  AIK +N + L  K + V     K  +  K  ++ AN   +++ N++P+V +      F  +G  VT+  + RD +TG SRGFGF+++ S E +  A++ +N +    + + V  A KK  + E
Sbjct:  165 LHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGD-VTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREE 326          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23
Identity = 61/163 (37.42%), Postives = 99/163 (60.74%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAY-KKDTKGE 483
            TE +L+ELF Q G V ++ V +D +T    GY +V + S  D + A++ LN   + G+P R+  + +D      G  N+FI NLD  +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+  AI+ +N   L  +++ V Y   KKD + +
Sbjct:   77 TEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNIL-SCKVAQD-ENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSK 237          

HSP 2 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 54/179 (30.17%), Postives = 93/179 (51.96%), Query Frame = 1
Query:   13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE--RHGTPAERILAAN 522
            L + F   G +++  V +D   N  +GYGFV + ++E A  AIK +N + L  K + V     K  +  K  ++ AN   +++ N+  +  ++   D F+ +G  VT+  + RD + G SRGFGF+++ + E +  A+E +NG+    + + V  A KK  + E  R    A R+  AN
Sbjct:  169 LHDTFAAFGNILSCKVAQDENGN-SKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGD-VTSSSLARDSE-GKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKAN 344          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23
Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468
            TE +L+ELF   G V ++ V +D VT    GY +V + +  D + A++ LN   + GKP R+  + +D      G  N+FI NLD  +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG  L ++++ V +   K
Sbjct:   64 TEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 218          

HSP 2 Score: 75.8702 bits (185), Expect = 2.434e-13
Identity = 50/164 (30.49%), Postives = 91/164 (55.49%), Query Frame = 1
Query:   13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483
            L + F   G +++  V +D   N  +GYGFV + + E A+ AIK +N + L  K +     ++K  +  K  ++ AN   ++I N+D +V ++     F  FG I T+  + RD + G SRGFGF+++ + +++ AA++ MN + +  +++ V  A KK  + E
Sbjct:  156 LHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI-TSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREE 316          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_DEBHA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23
Identity = 65/162 (40.12%), Postives = 98/162 (60.49%), Query Frame = 1
Query:    4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 483
            E LL+E+F   G V ++ V +D VT    GY +V F   ED + AI+ LN   + G+P R+  + +D      G  N+FI NL P +D K L+DTF+AFG I+ + K+  D D G S+ FGF+ Y++ EA++AAIE +NG  L +R++ V  +  KKD + +
Sbjct:   64 EALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKIL-SCKVATD-DMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESK 223          

HSP 2 Score: 96.2857 bits (238), Expect = 1.740e-19
Identity = 73/238 (30.67%), Postives = 111/238 (46.64%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGP 663
            +EE   +LF   G + ++Y+ KD      +G+GFV F + E A  A+  LN  ++ G+ I V +A + ++ L+                  G NLFI NLD  +D + L + F  FG I T+ ++M D +TG S+GFGF+ + S E +  AI  MN + +  + + V+ A +KD    R     ++I A N    Q +        G P     P   G   G  PP    NG   GP
Sbjct:  244 SEEEFKKLFEAYGKITSIYLEKDH-EGKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGSI-TSARVMVD-ETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRKDV---RRSQLEQQIQARNQMRMQNAAA----TGGIPGQFIPPMFYGQQPGFFPPNGRGNGPFPGP 471          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23
Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468
            TE +L+ELF   G V ++ V +D VT    GY +V + +  D + A++ LN   + GKP R+  + +D      G  N+FI NLD  +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG  L ++++ V +   K
Sbjct:   60 TEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 214          

HSP 2 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 52/164 (31.71%), Postives = 91/164 (55.49%), Query Frame = 1
Query:   13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483
            L + F   G +++  V +D   N  +GYGFV + + E A+ AIK +N + L  K +     ++K  +  K  ++ AN   ++I NLD ++ E+     F  FG I T+  + RD + G SRGFGF++Y + +++ AA++ MN + +  +++ V  A KK  + E
Sbjct:  152 LHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEI-TSATLSRDQE-GKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHEREE 312          
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23
Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 1
Query:    1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468
            TE +L+ELF   G V ++ V +D VT    GY +V + +  D + A++ LN   + GKP R+  + +D      G  N+FI NLD  +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG  L ++++ V +   K
Sbjct:   61 TEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 215          

HSP 2 Score: 80.4925 bits (197), Expect = 9.883e-15
Identity = 53/164 (32.32%), Postives = 92/164 (56.10%), Query Frame = 1
Query:   13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483
            L + F   G +++  V +D   N  +GYGFV + + E A+ AIK +N + L  K +     ++K  +  K  ++ AN   ++I N+D DV E+   + F  FG I T+  + RD + G SRGFGF+++ + E++ AA++ MN + +  +++ V  A KK  + E
Sbjct:  153 LHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEI-TSATLSRDQE-GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREE 313          
The following BLAST results are available for this feature:
BLAST of FC923496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
PABP_NEUCR1.987e-2338.04Polyadenylate-binding protein, cytoplasmic and nuc... [more]
EPABB_XENLA1.987e-2337.91Embryonic polyadenylate-binding protein B OS=Xenop... [more]
PABP_LODEL4.426e-2338.89Polyadenylate-binding protein, cytoplasmic and nuc... [more]
EPABA_XENLA4.426e-2337.25Embryonic polyadenylate-binding protein A OS=Xenop... [more]
PABP_MAGGR5.780e-2337.42Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_CHAGB5.780e-2337.42Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_NEOFI7.549e-2337.58Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_DEBHA7.549e-2340.12Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPTN7.549e-2337.58Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPOR7.549e-2337.58Polyadenylate-binding protein, cytoplasmic and nuc... [more]

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Properties
Property NameValue
Genbank descriptionC31705F10EF StrClemenN Citrus clementina cDNA clone C31705F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923496 ID=FC923496; Name=FC923496; organism=Citrus clementina; type=EST; length=709bp
ACTGAGGAGCTACTTTGGGAGTTGTTTGTTCAAGCAGGTCCTGTTGTTAA
TGTGTATGTTCCAAAAGATAGAGTGACAAACCTTCATCAAGGATACGGAT
TTGTAGAGTTCCGAAGTGAGGAAGATGCTGATTATGCAATAAAGGTGCTG
AATATGATAAAGCTTTATGGGAAGCCGATACGTGTGAATAAGGCATCCCA
AGACAAAAAGAGCTTAGATGTGGGGGCAAACCTTTTTATTGGAAACCTTG
ACCCAGATGTGGATGAGAAACTACTATATGATACATTCAGTGCGTTTGGA
GTCATTGTTACAAATCCCAAGATTATGCGAGATCCTGACACTGGAAATTC
TCGTGGTTTTGGTTTCATTAGCTATGATTCCTTTGAGGCATCCGATGCAG
CTATTGAGGCAATGAATGGCCAATACCTTTGCAACCGTCAAATTACTGTC
TCATATGCATATAAGAAAGACACTAAAGGAGAGCGCCATGGTACTCCGGC
AGAGAGAATTTTGGCGGCAAACAATCCGAGTTCCCAGAAGAGTAGGCCCC
ACACTTTATTTGCGAGTGGACCTCCATCACTACAGAATGCTCCTCAGGCC
AATGGTACTGTTGGTGGACCAGTGCCTCCACGCCCATATGCAAATGGTGC
TGCTTCAGGCCCAATTTCAGCTGTTCGACCACCACCACCACCACCACAGC
TGCAGCATT
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