FC923496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468 TE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 66 TEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 220 HSP 2 Score: 80.8777 bits (198), Expect = 7.567e-15 Identity = 53/164 (32.32%), Postives = 92/164 (56.10%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483 L + F G +++ V +D N +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I NLD ++D+ F FG I T+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E Sbjct: 158 LHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEI-TSATLSRDQE-GKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREE 318
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468 TE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 64 TEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 218 HSP 2 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 50/164 (30.49%), Postives = 91/164 (55.49%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483 L + F G +++ V +D N +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+D +V ++ F FG I T+ + RD + G SRGFGF+++ + +++ AA++ MN + + +++ V A KK + E Sbjct: 156 LHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEI-TSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREE 316
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468 TE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 63 TEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 217 HSP 2 Score: 85.1149 bits (209), Expect = 4.012e-16 Identity = 55/164 (33.54%), Postives = 93/164 (56.71%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483 L + F G +++ V +D N +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+DPDV E+ F FG I T+ + RDP+ G SRGFGF++Y + E++ AA++ M+ + + +++ V A KK + E Sbjct: 155 LHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEI-TSATLSRDPE-GKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREE 315
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23 Identity = 55/163 (33.74%), Postives = 99/163 (60.74%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 483 TE +L+E F AGP++++ + +D +T+ Y +V F+ +DA++A+ +N + GKP+R+ + +D G N+F+ NLD ++ K LYDT SAFG I++ + D S+G+GF+ +++ EA++ AI+ MNG L R++ V + +K+ + E Sbjct: 23 TEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVC---DENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182 HSP 2 Score: 90.8929 bits (224), Expect = 7.312e-18 Identity = 64/213 (30.05%), Postives = 106/213 (49.77%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK-GERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQN 588 +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + +R+ + +Q++ P F + P QN Sbjct: 204 DERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQN 412 HSP 3 Score: 85.1149 bits (209), Expect = 4.012e-16 Identity = 51/137 (37.23%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 79 NLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468 N +GYGFV F + E A+ AIK +N + L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 135 NGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.860e-23 Identity = 58/153 (37.91%), Postives = 89/153 (58.17%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 456 TE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+ +N L G+PIR+ + +D G N+FI NL+ +D K LYDTFS FG I++ D SRGFGF+ +++ EA+ AI MNG L +R++ V + Sbjct: 23 TEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH 172 HSP 2 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 52/175 (29.71%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 477 E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N ++ G+ + +A QD+ G NL++ NLD +D+ L FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 204 EQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVI-TSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEER 374
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.197e-22 Identity = 59/153 (38.56%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSY 456 TE +L+E+F GPV ++ V +D VT GY +V + + D + A++ LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ D + G SRGF F+ Y + EA+DAAI+A+NG L ++++ V + Sbjct: 58 TEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDIL-SCKVGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGH 208 HSP 2 Score: 93.2041 bits (230), Expect = 1.473e-18 Identity = 66/220 (30.00%), Postives = 112/220 (50.91%), Query Frame = 1 Query: 37 GPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA------------SQDKKSLD-----VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPV---PPRP 636 GP ++V + +D + +G+GFV + + E A A+ LN ++ GK + +A S ++K L+ G NL++ NLD + D+ L F AFG I T+ K+MRD D+G SRGFGF+ Y S + + A+ MNG+ + + + V+ A +KD + + A + +Q+++ + +G P +Q G +G P+ PP P Sbjct: 251 GPTISVALSRDE-KGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTI-TSSKVMRD-DSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVRRQ----------ALESQIAQRAQQRMQYGAGFPGMQ------GYMGQPMYGYPPMP 451
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22 Identity = 62/162 (38.27%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 483 E L+E+F G V ++ V +D V+ GY +V + ED + AI+ LN + G+P R+ + +D + G N+FI NL P +D K L+DTFS FG I+ + K+ D D G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + KKD + + Sbjct: 65 EATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKIL-SCKVATD-DMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 224 HSP 2 Score: 90.5077 bits (223), Expect = 9.550e-18 Identity = 71/245 (28.98%), Postives = 112/245 (45.71%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYA-------NGAASGP 663 +EE L +LF G + ++Y+ KD +G+GFV + E A A++ LN ++ G+ I V +A + ++ ++ G NLFI NLD +D + L + F FG I T+ ++M D +TG S+GFGF+ + S E + AI MN + + + V+ A +KD R ++I A N +QNA G G +PP Y NG + P Sbjct: 245 SEEDLKKLFTPYGAITSIYLEKD-AEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTI-TSARVMVD-ETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVALAQRKDV---RRSQLEQQIQARNQ----------------MRMQNAAATGGIPGQFIPPMFYGQQGFFPPNGRGNAP 467
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22 Identity = 60/163 (36.81%), Postives = 100/163 (61.35%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGE 483 TE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L ++++ V + KKD + + Sbjct: 67 TEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSK 227 HSP 2 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 54/164 (32.93%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483 L + F G +++ V +D N +GYGFV + + E A AIK +N + L K + V K + K ++ AN +++ N+D D E+ D F FG I T+ + RD ++G SRGFGF+++ S + + AA+EA+N + +++ V A KK + E Sbjct: 159 LHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEI-TSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREE 320
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 62/162 (38.27%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 483 E L+E+F G V ++ V +D V+ GY +V + ED + AI+ LN + G+P R+ + +D + G N+FI NL P +D K L+DTFSAFG I+ + K+ D + G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + KKD + + Sbjct: 65 EATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKIL-SCKVATD-EFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 224 HSP 2 Score: 90.8929 bits (224), Expect = 7.312e-18 Identity = 71/238 (29.83%), Postives = 111/238 (46.64%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGP 663 +EE +LF G + ++Y+ KD+ +G+GFV F E A A++ LN ++ G+ I V +A + ++ L+ G NLF+ NLD +D + L + F FG I T+ K+M D + G S+GFGF+ + + E + AI MN + + + + V+ A +KD R ++I A N Q + A G P P G G PP N GP Sbjct: 245 SEESFEKLFSPFGKITSIYLEKDQ-DGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTI-TSAKVMVD-EAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDV---RRSQLEQQIQARNQMRMQNAA-----AGGLPGQFIPPMFYGQQGF-FPPNGRGNAPYPGP 470
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 58/170 (34.12%), Postives = 100/170 (58.82%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAER 507 TE L++LF VV+V V +D+ GY ++ F + DA A++ LN L+ +PIR+ +++D + L N+FI NLD +D K L++TFS+FG I++ K+ D TG S+G+GF+ ++ E++ AAI+ +NG + ++Q+ V + ++ + TP R Sbjct: 61 TEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSC-KVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPR 227 HSP 2 Score: 85.5001 bits (210), Expect = 3.072e-16 Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483 L+E F G +++ V D VT +GYGFV+F EE A AI LN + + K + R +A + N+++ NL ++ E L TF FGVI ++ +MRD +GNSR FGF++++ EA+ +A+E MNG L + + V A KK + E Sbjct: 152 LFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI-SSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREE 312 HSP 3 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 67/232 (28.88%), Postives = 110/232 (47.41%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSL--------------DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANG 648 E+ L + F + G + + V +D+ N + +GFV F E A A++ +N I L + R K S+ ++ L GANL++ NLD VD++ L + FS +G VT+ K+M +P G SRGFGF++Y + E + A+ MNG+ + + + ++ A +K+ + H + A P S P GPP Q ++ VP +P G Sbjct: 242 EDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGN-VTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDR-RAHLQALFSQIRAPGPMSGFHHPPGGPMPGPPQHMYVGQNGASM---VPSQPIGYG 466 The following BLAST results are available for this feature:
BLAST of FC923496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923496 ID=FC923496; Name=FC923496; organism=Citrus clementina; type=EST; length=709bpback to top |