FC923496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.391e-22 Identity = 58/151 (38.41%), Postives = 91/151 (60.26%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 450 +E L+++F G V ++ V +D +T GY +V F + A AI+ LN + GK R+ + +D GA N+FI NL PD+D K LYDTFS FG I+++ K+ D +TG S+GFG++ ++ E++ AI+A+NG L ++I V Sbjct: 47 SEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSS-KVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYV 195 HSP 2 Score: 83.5741 bits (205), Expect = 1.167e-15 Identity = 62/202 (30.69%), Postives = 99/202 (49.01%), Query Frame = 1 Query: 85 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQK--SRPHTLFASGPPSLQNAPQANGTVGGPVPPR 633 ++G+GFV F + EDA ++ LN + G+P+ VN+A + +K + G NLFI NLD +D+K L + F+ +G I T+ K+M + G S+GFGF+ + + E + AI N Q + + + V+ A +KD R A++I A N Q+ + A+G P P G +PPR Sbjct: 255 NKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTI-TSAKVM-TTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDV---RRSQLAQQIQARNQMRFQQASAAAAAAAAAGMPGQFMPPMFYGV----MPPR 447
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV-SYAYKKDTKGE 483 E LL+E+F G V ++ V +D VT GY +V F D AI+ LN + G+P R+ + +D G N+FI NL P +D K L+DTFSAFG I+ + K+ D + G S+ FGF+ Y++ EA++AAIE +NG L +R++ V + K+D + + Sbjct: 71 EALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRIL-SCKVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESK 230 HSP 2 Score: 97.4413 bits (241), Expect = 7.812e-20 Identity = 72/232 (31.03%), Postives = 112/232 (48.28%), Query Frame = 1 Query: 19 ELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPRPYANGAASGP 663 E+F GPV +V++ D+ +G+GFV F + E A A+K +N ++ G+ + V +A + ++ LD G NLF+ NLD +D + L + F FG I T+ ++M D D G S+GFGF+ + S E + AI MN + + + + V+ A +KD R ++I A N Q + A+G P +P G G PP G A GP Sbjct: 257 EIFKPFGPVTSVHLETDQ-EGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTI-TSARVMVD-DAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKDV---RRSQLEQQIQARNQMRMQNAAA----AAGMPGQFMSPMFYGQQPGFFPPN--GRGGAQGP 476
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21 Identity = 58/168 (34.52%), Postives = 99/168 (58.93%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAE 504 E L++ F AGPV+++ V +D +T GY +V F+ DA+ A+ +N + KPIR+ + +D G N+FI NLD +D K +YDTFSAFG I+ + K+ D + GNS+G+GF+ +++ EA++ +I+ +NG L +++ V + + + G A+ Sbjct: 15 ESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNIL-SCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAK 180 HSP 2 Score: 78.9518 bits (193), Expect = 2.875e-14 Identity = 54/160 (33.75%), Postives = 92/160 (57.50%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK---ASQDKKSLDVGANLF----IGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC-NRQITVSYAYKK 468 +++ F G +++ V D N +GYGFV F +EE A+ +I +N + L GK + V K + +K L A LF + N D D++ L + F +G I T+ K+M D G S+GFGF+++++ EA++AA++A+NG+ + + + V+ A KK Sbjct: 106 IYDTFSAFGNILSCKVATDEKGN-SKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKI-TSYKVMSKED-GKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKK 262 HSP 3 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 49/176 (27.84%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKL-YGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 477 +E L E F G + + Y + +G+GFV F + E A+ A++ LN + GK + V +A Q + G NL++ NLD +D+ L FS +G I T+ K+M D + G S+GFGF+ +++ + A+ +NG+ + ++ + V+ A +K+ + Sbjct: 196 DEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNI-TSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEER 368
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.142e-21 Identity = 58/159 (36.48%), Postives = 96/159 (60.38%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 477 E L +LF Q PV N+ V +D +T+ GY +V F + EDA A++ LN + +PIR+ +++D + L N+FI NLD +D K LY+TFS+FG I+ + K+ D G S+G+GF+ ++ E + AAI+ +NG L ++Q+ V + ++ + Sbjct: 58 ESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTIL-SCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 213 HSP 2 Score: 80.1073 bits (196), Expect = 1.291e-14 Identity = 58/164 (35.37%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK--ASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483 L+E F G +++ V D V +GYGFV+F EE A AI LN + L K + V QD+ + GA N+++ NL ++ + L TF +G I ++ +M+D +GNSR FGF+++ S EA+ A+E MNG L + V A KK + E Sbjct: 148 LYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI-SSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREE 308 HSP 3 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 71/241 (29.46%), Postives = 115/241 (47.72%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLD--------------VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRP------HTLFASGPPSLQNAPQANGTVG-GPVPPRPYANG 648 T++ L + F + G + + V KD+ N + +GFV F S E A A++ +N I L G+ + R K S ++ L G+NL++ NLD V+++ L + FS +G VT+ K+M + G SRGFGF++Y + E + A++ MNG+ + + + V+ A +K+ ER +P + P H GP S + P G G G VP +P G Sbjct: 237 TDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEKMNGISL-GEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGN-VTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKE---ERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYG 470
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 57/157 (36.31%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468 TE +L+ELF G V ++ V +D VT GY +V + + A+ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + G S+G+GF+ Y++ EA++ AI+ +NG L ++++ V + K Sbjct: 54 TEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNIL-SCKVAQD-EFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 208 HSP 2 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 52/164 (31.71%), Postives = 94/164 (57.32%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 483 L + F G +++ V +D + +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+DP+V+++ F FG I T+ + RD + G SRGFGF+++ + E++ AA+E MN + + ++++ V A KK + E Sbjct: 146 LHDTFAAFGNILSCKVAQDEF-GVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEI-TSATLSRDSE-GKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREE 306
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PAB4L_HUMAN (Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 63/170 (37.06%), Postives = 98/170 (57.65%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGERHGTPAE 504 TE+LL+ F GPV+++ + +D+VT GY +V F DA A+ +N + GK IR+ + +D G N+FI NLD +D K LY+ FSAFG I+++ K+M D D G S+G+ F+ + + A+D AIE MNG+ L ++ V + +KD + E +E Sbjct: 22 TEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSS-KVMSD-DQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASE 188 HSP 2 Score: 78.5666 bits (192), Expect = 3.755e-14 Identity = 53/159 (33.33%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKK 468 L+E F G +++ V D + +GY FV F+++ AD AI+ +N L G + R ++ ++ + N++I N D+D++ L D FS +G ++ K+M D +G S+GFGF+S+DS EA+ A+E MNG+ + + I V A KK Sbjct: 114 LYEHFSAFGKILSSKVMSDDQGS--KGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLS-VKVMTD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKK 268 HSP 3 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 51/171 (29.82%), Postives = 91/171 (53.22%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-------KKSLDV----------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 465 +E L ++F + G ++V V D + +G+GFV F S E A A++ +N + G+ I V +A + K+ + G L+I NLD +D++ L + FS+FG I + K+M++ G S+GFG I + S E + A+ MNG+ L ++ ++++ A + Sbjct: 203 DERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSI-SRVKVMQEE--GQSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 369
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PAP1M_HUMAN (Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 55/164 (33.54%), Postives = 94/164 (57.32%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKDTKGER 486 TE +L+E F AGP++++ + +D++T GY +V ++ DA A++ LN + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++ D +G+GF+ + E+++ AI+ MNG +L R+I V + K+ + ER Sbjct: 14 TEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVAC---DEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAER 174
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 58/159 (36.48%), Postives = 93/159 (58.49%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS-YAYKKD 471 TE LL+++F GP+ ++ V +D VT GY +V + E AI+ LN ++ G+P R+ + +D G+ N+FI NL P +D K L++TFS FG ++ + K+ D + GNSRGFGF+ + + AIEA+NG + ++ V+ + KKD Sbjct: 62 TEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVL-SCKVALD-ENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKD 218 HSP 2 Score: 87.4261 bits (215), Expect = 8.084e-17 Identity = 74/245 (30.20%), Postives = 118/245 (48.16%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNP--SSQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPR--PYANGAASGPISA 672 T+E +LF Q G +V+ + KD +G+GFV F A A++ LN + + + V +A + +K + G NLFI NLD +D++ L + F+ +G I T+ ++MRD + GNS+GFGF+ + S E + A+ N Q + + + V+ A +KD R A++I A N Q+ + A+G P Q PQ G + PR P N +GP+ A Sbjct: 243 TDEEFEQLFSQYGEIVSAALEKD-AEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEEFAPYGTI-TSARVMRDQE-GNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRKDV---RRSQLAQQIQARNQIRFQQQQQQQAAAAAAGMPG-QYMPQ---MFYGVMAPRGFPGPNPGMNGPMGA 477
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20 Identity = 57/152 (37.50%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 453 +E L+++F G V ++ V +D +T GY +V F E AI+ LN + G+ R+ + +D G+ N+FI NL PD+D K LYDTFS FG I+++ KI D + G S+GFGF+ ++ A+ AI+A+NG L ++I V+ Sbjct: 50 SEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSS-KIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVA 199 HSP 2 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 72/229 (31.44%), Postives = 113/229 (49.34%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPS-SQKSRPHTLFASGPPSLQNAPQANGTVGGPVPPR 633 T+E ELF + GP+V+ + KD L +G+GFV + EDA A++ LN +L G+ + V +A + + + V G NLF+ NLD VD++ L + F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+ A +KD R A++I A N Q + A+G P P G +PPR Sbjct: 231 TDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTI-TSAKVMRT-ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDV---RRSQLAQQIQARNQMRYQQATAAAAAAAAGMPGQFMPPMFYGV----MPPR 449 HSP 3 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 47/162 (29.01%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 13 LWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTK 477 L++ F G +++ + D +G+GFV F E A AI LN + L G+ I R + SQ +++ NL++ N++ + ++ + F+ FG IV+ + +D D G +GFGF++Y+ E + A+EA+N L ++ V A KK+ + Sbjct: 142 LYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVS-ASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300
BLAST of FC923496 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 56/151 (37.09%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 1 TEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 450 TE++L++ F AGP+ + +D VT GYG+V FR DA++A+ +N + GKP R+ + D + G N+FI NLD +D + L+ FSAFG I++ + D S+G+ ++ +DS A++ AI MNG L NRQ+ V Sbjct: 30 TEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC---DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV 177 HSP 2 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 49/167 (29.34%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 4 EELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-----------------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS 453 +E L ELF + GP +V V +D + +G+GFV + + E A A+ L+ + GK + V +A + +KS G ++I NLD ++++ L + FS+FG I + K+M + G +GFG + + SFE + A++ MNG+ + ++ + V+ Sbjct: 212 DEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSI-SRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVT 374 The following BLAST results are available for this feature:
BLAST of FC923496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923496 ID=FC923496; Name=FC923496; organism=Citrus clementina; type=EST; length=709bpback to top |