FC923498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17A_SCHPO (40S ribosomal protein S17-A OS=Schizosaccharomyces pombe GN=rps17a PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.463e-30 Identity = 63/81 (77.78%), Postives = 75/81 (92.59%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 MGRVRTKT K++SR VIE+YY R+TLDF TNK+I++EVAII SKRLRNKIAG++THLMKRI+RGPVRGIS KLQEEER+R+ Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERK 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17_CAEEL (40S ribosomal protein S17 OS=Caenorhabditis elegans GN=rps-17 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 4.707e-29 Identity = 61/81 (75.31%), Postives = 73/81 (90.12%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 M RVRTKTVKK+SR +IE+YY+RMT DFH NK++ +EVAII SK LRNKIAG+ THLM+RI+RGPVRGIS+KLQEEER+RR Sbjct: 1 MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSKPLRNKIAGYITHLMRRIERGPVRGISIKLQEEERERR 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17_ANOGA (40S ribosomal protein S17 OS=Anopheles gambiae GN=RpS17 PE=2 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 4.707e-29 Identity = 59/81 (72.84%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 MGRVRTKT+KK+S+ +IE+YY+R+T+DF TNK+I+EEVAIIP+K LRNKIAGF THLMKR++ VRGIS+KLQEEER+RR Sbjct: 1 MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEEERERR 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17B_YEAST (40S ribosomal protein S17-B OS=Saccharomyces cerevisiae GN=RPS17B PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.148e-29 Identity = 58/81 (71.60%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLMKRI++GPVRGIS KLQEEER+R+ Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERK 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17A_YEAST (40S ribosomal protein S17-A OS=Saccharomyces cerevisiae GN=RPS17A PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.148e-29 Identity = 58/81 (71.60%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLMKRI++GPVRGIS KLQEEER+R+ Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERK 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17_DROME (40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.049e-28 Identity = 59/81 (72.84%), Postives = 73/81 (90.12%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 MGRVRTKTVKK+++ +IE+YY+R+TLDFHTNK+I EEVAIIP+K LRNKIAG+ THLM R++ VRGIS+KLQEEER+RR Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERR 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17_SPOFR (40S ribosomal protein S17 OS=Spodoptera frugiperda GN=RpS17 PE=2 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 1.370e-28 Identity = 58/81 (71.60%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 MGRVRTKTVKK+++ +IE+YY+R+TLDF TNK+I EE+AIIP+K LRNKIAGF+THLM+R++ VRGIS+KLQEEER+RR Sbjct: 1 MGRVRTKTVKKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERR 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17_DICDI (40S ribosomal protein S17 OS=Dictyostelium discoideum GN=rps17 PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.871e-26 Identity = 55/81 (67.90%), Postives = 70/81 (86.42%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 MGRVRTKT+K++S+ +IE++Y R+T DF TNK+ +++A IPSKRLRNKIAGF THLM+RI GPVRGIS KLQEEER++R Sbjct: 1 MGRVRTKTIKRASKLLIEKHYPRLTNDFDTNKRTCDKLAKIPSKRLRNKIAGFCTHLMRRIANGPVRGISYKLQEEEREKR 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17_ENCCU (40S ribosomal protein S17 OS=Encephalitozoon cuniculi GN=RPS17 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.772e-13 Identity = 33/81 (40.74%), Postives = 56/81 (69.14%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIKRGPVRGISLKLQEEERDRR 353 MG VR K VK+++R + E+Y+ R+ F N ++++VA++ SK+L+N+IAG+ T L K+I +G + +K EEER+R+ Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERK 81
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17E_META3 (30S ribosomal protein S17e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps17e PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12 Identity = 29/61 (47.54%), Postives = 46/61 (75.41%), Query Frame = 3 Query: 111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRI 293 MGR+R +K++ ++E+Y R+T DF TNKK+++EVA I +KRLRN++AG+ T MK++ Sbjct: 1 MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKKV 61 The following BLAST results are available for this feature:
BLAST of FC923498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923498 ID=FC923498; Name=FC923498; organism=Citrus clementina; type=EST; length=358bpback to top |