FC923498

Overview
NameFC923498
Unique NameFC923498
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length358
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923498 vs. ExPASy Swiss-Prot
Match: RS17E_METJA (30S ribosomal protein S17e OS=Methanocaldococcus jannaschii GN=rps17e PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.229e-12
Identity = 30/62 (48.39%), Postives = 48/62 (77.42%), Query Frame = 3 
Query:  111 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIK 296
            MGR+R   +K+++ ++I++Y    T DF TNK++LEEVA I +KRLRN+IAG+ TH M++++
Sbjct:    1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
The following BLAST results are available for this feature:
BLAST of FC923498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RS17E_METJA5.229e-1248.3930S ribosomal protein S17e OS=Methanocaldococcus j... [more]

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Properties
Property NameValue
Genbank descriptionC31705F12EF StrClemenN Citrus clementina cDNA clone C31705F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923498 ID=FC923498; Name=FC923498; organism=Citrus clementina; type=EST; length=358bp
GGCTAGCACTCGTCTTCGCTTTAGCTGCCGCAATCTCTTGACATCTCAAG
CTCTTCTGCTTCACCGTCTTTGTCTTCTTCAAGACAGCAGCAGCAGCTTC
TTAAACTGAAATGGGTCGTGTTCGTACCAAGACCGTGAAGAAGTCCTCTC
GCCAGGTGATTGAGAGGTACTACTCAAGAATGACACTGGACTTCCATACC
AACAAGAAGATTTTGGAGGAGGTTGCTATCATCCCCTCGAAGAGGCTGCG
TAACAAAATTGCTGGGTTCTCAACCCATTTGATGAAGAGGATCAAAAGGG
GTCCAGTTCGTGGAATCTCCCTTAAATTGCAGGAAGAGGAGCGCGACCGC
CGCATGGA
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