FC923499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28 Identity = 55/137 (40.15%), Postives = 92/137 (67.15%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKE 497 RR++++ +R+ + PG+SASP DN+ +N MI+GP+ +PYE G F+L L E+YP P V+FL++++HPN+ G ICLDIL+++W+P + ++L SIQ+L + PNP P + A ++ +++ V+ KE Sbjct: 7 RRLMRDFKRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKE 143
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28 Identity = 61/143 (42.66%), Postives = 87/143 (60.84%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAKEWTRLYA 515 +RI +E L +P P SA P DN+ ++ I+GPS +PYEGG+F L++ P DYP PK+ F T+IYH N+D G + ++IL+D WSPAL I VL +I+++ P P P IA+ + D + E AKEWT +A Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFA 181
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 54/130 (41.54%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETE 476 RR++++ +RL +P G+S +P+E+N+ +N +I GP +P+E G FKL + E+YP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL PNP+ P + A+ ++ ++ E Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 54/130 (41.54%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETE 476 RR++++ +RL +P G+S +P+E+N+ +N +I GP +P+E G FKL + E+YP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL PNP+ P + A+ ++ ++ E Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 54/130 (41.54%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETE 476 RR++++ +RL +P G+S +P+E+N+ +N +I GP +P+E G FKL + E+YP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL PNP+ P + A+ ++ ++ E Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 54/130 (41.54%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETE 476 RR++++ +RL +P G+S +P+E+N+ +N +I GP +P+E G FKL + E+YP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL PNP+ P + A+ ++ ++ E Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.505e-28 Identity = 54/130 (41.54%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETE 476 RR++++ +RL +P G+S +P+E+N+ +N +I GP +P+E G FKL + E+YP P VRFL+K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL PNP+ P + A+ ++ ++ E Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28 Identity = 53/130 (40.77%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETE 476 RR++++ +RL +P G+S +P+E+N+ +N +I GP +P+E G FKL + E+YP P VRF++K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL PNP+ P + A+ ++ ++ E Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28 Identity = 53/130 (40.77%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETE 476 RR++++ +RL +P G+S +P+E+N+ +N +I GP +P+E G FKL + E+YP P VRF++K++HPN+ G ICLDIL+++WSP + ++L SIQ+LL PNP+ P + A+ ++ ++ E Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136
BLAST of FC923499 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28 Identity = 55/136 (40.44%), Postives = 87/136 (63.97%), Query Frame = 3 Query: 87 RRIVKETQRLLSEPAPGISASPAEDNMRYFNVMILGPSQSPYEGGVFKLELFLPEDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNIAKHWKADETEAVETAK 494 +R++++ +RL ++P GIS +P DN+ +N +I GP+ +P+E G FKL L E YP P V+FL+K++HPN+ G +CLDIL+++WSP + +L SIQ+LL PNP+ P + A ++ + E V K Sbjct: 7 KRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEYVRRVK 142 The following BLAST results are available for this feature:
BLAST of FC923499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923499 ID=FC923499; Name=FC923499; organism=Citrus clementina; type=EST; length=688bpback to top |