FC923501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923501 vs. ExPASy Swiss-Prot
Match: GH310_ORYSJ (Putative indole-3-acetic acid-amido synthetase GH3.10 OS=Oryza sativa subsp. japonica GN=GH3.10 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 86/236 (36.44%), Postives = 131/236 (55.51%), Query Frame = 2 Query: 5 REEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPKPELADLIHKKCSGLSNWYGLIPELFPNAKYLSRIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLFATINIDKNTEKDLQ 712 R ++ V + FA +LV A R +L W +L DI G L+ R+T PS R +CS +W G++ L+P K L+ ++TG M Y+ L++Y+G LP++S Y SSE + G N+ P P ++ ++PN YFEF+P +G +E L V+ G EYE++VT AGL RYR+GDV+ V GFHN+ P+ +F+ R+++ +I DK E +LQ Sbjct: 225 RHDVLRVGAVFAAALVRAIRFLQLNWAQLAADIETGELNPRVTDPSDR-------------------ECSR-GDWTGIVTRLWPKTKCLNVVVTGVMAQYIPTLQYYSGGLPIVSGMYASSECFFGLNLRPLCGPSEVSYTIMPNTAYFEFLP--VGEAVDASNLVE-----LARVEDGREYEVVVTTYAGLNRYRVGDVLCVTGFHNAAPQFRFVRRQSVLLSIEADKTDEAELQ 433
BLAST of FC923501 vs. ExPASy Swiss-Prot
Match: GH313_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.13 OS=Oryza sativa subsp. japonica GN=GH3.13 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.915e-27 Identity = 73/194 (37.63%), Postives = 104/194 (53.61%), Query Frame = 2 Query: 5 REEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRI-TVPSIRAAMSKILKPK--PELADLIHKKCSGLSNWYGLIPELFPNAKYLSRIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAG 577 R E+ V + FA + + A + E W LC DIR G + T + R A+ +L + P+LAD I +C G S W G++ L+P KY+ I+TGSM Y+ L Y G LPL+S Y SSE + G N+ P PPE + +LPN+ Y+EFI +V + + V L V+VG YE++VT G Sbjct: 252 RGEVLRVGAVFASAFLRAVKFLEGHWRALCADIRAGRADPAVVTDAACRGAVDAVLAARADPDLADAIAAECGGAS-WRGIVRRLWPRTKYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVVYTLLPNMCYYEFIKVEKDGDGEKVR--DGEVVDLVGVEVGAYYELVVTTFTG 442
BLAST of FC923501 vs. ExPASy Swiss-Prot
Match: GHDC_MOUSE (GH3 domain-containing protein OS=Mus musculus GN=Ghdc PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12 Identity = 59/217 (27.19%), Postives = 98/217 (45.16%), Query Frame = 2 Query: 38 AHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPKPELADLIHKKCSGLSNWYGLIPELFPNAKYLSRIMTGSMEHYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLFATINI 685 A L+ F E EEL + I G+L + + P A + + L+ P GL L+P + + + +G + LR + L S Y +S G + N+ P P ++ + P + + E +P + G E + LT+ + +EYE+++TN L R RLGDVV+V+G +N P ++F CR L T+N+ Sbjct: 204 AVELLDVFVGLEADGEELAEAIAAGILGTLL--PKRAAELKEALEQGPR----------------GLARRLWPKLQVVVTLDSGGQAEAVAALRVLWCQGLAFFSPAYAASGGVVALNLWPERPQ--GSYLLPPGVPFIELLPIKEGTQEEAASTLL-----LTDAQREKEYELVLTNHTSLTRCRLGDVVQVVGTYNQCPVVRFTCR--LGQTLNV 393
BLAST of FC923501 vs. ExPASy Swiss-Prot
Match: GHDC_HUMAN (GH3 domain-containing protein OS=Homo sapiens GN=GHDC PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = 2 Query: 233 GLIPELFPNAKYLSRIMTGSMEHYLKKLRH-YAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICR 658 GL L+P + + + G + L + L S Y +S G +G N+ P P L + + P + E +P + G E + L E + G+EYE+++T+ A L R RLGDVV+V+G +N P ++FICR Sbjct: 250 GLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLGLNLQPEQPHGL--YLLPPGAPFIELLPVKEGTQEEAASTLL-----LAEAQQGKEYELVLTDRASLTRCRLGDVVRVVGAYNQCPVVRFICR 385 The following BLAST results are available for this feature:
BLAST of FC923501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923501 ID=FC923501; Name=FC923501; organism=Citrus clementina; type=EST; length=720bpback to top |