FC923502

Overview
NameFC923502
Unique NameFC923502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39
Identity = 86/179 (48.04%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQP---DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            L  GAKMP +GLGTW++ P  V EA+ +AI   GYRHIDCA+ Y NE E+G  L++  +  V+KREDL+I SKLWC DH    V  A   TL+DL++DY+DLYL+HWP   K G     L+ +  + P   D   TW+AME L D G  +AIGVSNF+  +++ +L     +  PAVNQ
Sbjct:    7 LYTGAKMPILGLGTWKSPPGKVTEAVKVAI-DLGYRHIDCAHVYQNENEVGLGLQEKLQGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWPTGFKPGKDPFPLDGDGNVVPDESDFVETWEAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38
Identity = 84/179 (46.93%), Postives = 114/179 (63.69%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQP---DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            L NGAKMP +GLGTW++ P  V EA+  AI   GYRHIDCA+ Y NE E+G  L++  ++ V+KRE+L+I SKLWC  H    V  A  +TL DL++DY+DLYL+HWP   K G  +  L+    + P   D   TW+AME L D G  ++IGVSNF+  +++ +L     +  PAVNQ
Sbjct:    7 LYNGAKMPILGLGTWKSPPGQVTEAVKTAI-DLGYRHIDCAHVYQNENEVGVALQEKLKEQVVKREELFIVSKLWCTSHDKSLVKGACQKTLNDLKLDYLDLYLIHWPTGFKHGSEYFPLDAAGNVIPSDTDFLDTWEAMEGLVDEGLVKSIGVSNFNHLQIERILNKPGLKYKPAVNQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38
Identity = 79/178 (44.38%), Postives = 116/178 (65.17%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGV-IKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKG--FISLNPEDLLQPD---IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+ G +MP +GLGTW++ P  V +A+  A+   GYRHIDCA  Y NE+E+G  L +    G  ++R+D+++ SKLW   H P+DV +A  R+L DL++ Y+DLYL+HWP+   +G   I  +P+  +Q D      TW AME L D G A+AIG+SNF+ K++ D+L +A+  P VNQ
Sbjct:    7 LSTGQRMPTVGLGTWKSAPGQVKQAVLAAL-DCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSDLRLSYLDLYLIHWPMAFGRGDELIPRHPDGTIQYDDTHYRDTWAAMEKLVDQGLAKAIGLSNFNAKQIDDILSIAKHKPVVNQ 183          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 86/178 (48.31%), Postives = 115/178 (64.61%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+ G KMP IGLGTW+++P  V  AI  A+   GYRHIDCA  YGNE EIG  LK+    G  + RE+L++ SKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TWKA+EAL   G  +A+G+SNFS +++ D+L VA V PAV Q
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAIKYALS-VGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVKYDSTHYKETWKALEALVAKGLVKALGLSNFSSRQIDDVLSVASVRPAVLQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 85/178 (47.75%), Postives = 114/178 (64.04%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+ G KMP IGLGTW+++P  V  A+  A+   GYRHIDCA  YGNE EIG  LK+    G  + RE+L++ SKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  +  D      TWKA+EAL   G  RA+G+SNF+ +++ D+L VA V PAV Q
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAVKYALS-VGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTICYDSTHYKETWKALEALVAKGLVRALGLSNFNSRQIDDILSVASVRPAVLQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.005e-38
Identity = 86/178 (48.31%), Postives = 114/178 (64.04%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+ G KMP IGLGTW+++P  V  AI  A+   GYRHIDCA  YGNE EIG  L +    G  + RE+L++ SKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TWKA+EAL   G  RA+G+SNFS +++ D+L VA V PAV Q
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAIKYALT-VGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.925e-38
Identity = 85/178 (47.75%), Postives = 115/178 (64.61%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+ G KMP IGLGTW++ P  V  AI  A+   GYRHIDCA  YGNE EIG  LK+    G ++ RE+L++ SKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TW+A+EAL   G  RA+G+SNF+ +++ D+L VA V PAV Q
Sbjct:    8 LHTGQKMPLIGLGTWKSDPGQVKAAIKYALS-VGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDSPFPKNADGTIRYDSTHYKETWRALEALVAKGLVRALGLSNFNSRQIDDVLSVASVRPAVLQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 81/177 (45.76%), Postives = 115/177 (64.97%), Query Frame = 3
Query:  159 FELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFE-DGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQP--DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            F+L++G K+P +G GTW+A+ ++V +A+ +A+  AGYRHIDCA  Y NEKE+G    K F  +  +KRED++I SKLW   H  E V  A++RTL DL + Y+DLYLVHWPV  +     +      Q    I  TW+ ME L D+G  ++IG+SNF+V+ L ++L  AR+ PA NQ
Sbjct:    5 FKLSSGHKIPLVGFGTWKAETTLVGKAVEVAL-DAGYRHIDCAAVYLNEKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSDLGLQYLDLYLVHWPVAFEYTSNDIQTSGSTQEFVSIRETWEEMEKLVDAGLVKSIGLSNFNVQGLMEVLSYARIKPAANQ 180          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 5.126e-38
Identity = 85/178 (47.75%), Postives = 115/178 (64.61%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDG-VIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF--ISLNPEDLLQPD---IPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+ G KMP IGLGTW+++P  V  AI  A+  AGYRHIDCA  YGNE EIG  LK+    G  + RE+L++ SKLW   H PEDV  A+ +TL DLQ++Y+DLYL+HWP   ++G      N +  ++ D      TWKA+E L   G  +A+G+SNF+ +++ D+L VA V PAV Q
Sbjct:    8 LHTGQKMPLIGLGTWKSEPGQVKAAIKHALS-AGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQ 184          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.142e-37
Identity = 82/185 (44.32%), Postives = 119/185 (64.32%), Query Frame = 3
Query:  150 VQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLLQPDIP--STWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPA 671
            +QY+ LNNG K+P IG+G W+ + +  A+ +  AIK+ GYR  DCA  YGNEKE+G  + +  +DG++KR+DL+I SKLW   HA E+V KA+ ++L D  +DY DLYL+H+P+  K          GF   + +  +  D+P   TW+AME L D G  ++IGVSN S   L+DL++ AR+ PA
Sbjct:    3 LQYYTLNNGRKIPAIGMGCWKLENA--ADMVYAAIKE-GYRLFDCACDYGNEKEVGEGINRAIKDGLVKRKDLFITSKLWNNFHAKENVKKALMKSLSDFNLDYFDLYLMHFPISFKFVPFEEKYPPGFYCGDGDKFIYEDVPIIETWRAMENLVDEGLVKSIGVSNVSGGLLEDLIKAARIKPA 184          
The following BLAST results are available for this feature:
BLAST of FC923502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
ALDR_PIG6.056e-3948.04Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
ALDR_RABIT1.349e-3846.93Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
A1A1A_DANRE1.349e-3844.38Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
AK1A1_RAT3.005e-3848.31Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_PONAB3.005e-3847.75Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
AK1A1_PIG3.005e-3848.31Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1A1_BOVIN3.925e-3847.75Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
ALRA_DICDI5.126e-3845.76Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
AK1A1_MOUSE5.126e-3847.75Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
XYL1_PACTA1.142e-3744.32NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31705G05EF StrClemenN Citrus clementina cDNA clone C31705G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923502 ID=FC923502; Name=FC923502; organism=Citrus clementina; type=EST; length=734bp
GAATTTCTTTCCATGAATATGAAAATTTCTGCCATCTCCCCGCAAATTCA
ATCTCATCTCTCCACAAATTAAAAGGCCAGTGATCACTCACTGCCCCTGG
TCATTTCACACACATAACTTGGGAAATGGGCCAAATAGCAAACGATAACG
TTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGATTA
GGCACATGGCAGGCTAAACCTAGTGTTGTTGCCGAAGCCATTGCTATTGC
CATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATGGCA
ATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGAGTG
ATCAAGCGTGAGGATCTATGGATCGCCTCCAAGCTCTGGTGTTGTGATCA
TGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACTTGC
AGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACGAAG
AAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATATACC
AAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTCGAG
CTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTGAGA
GTTGCCCGTGTTACTCCTGCTGTTAACCAGTGGAATGCCACCCTGGATGG
CACAGGAAAGCTACATGATTTTGCAATCCAAGGG
back to top