FC923502

Overview
NameFC923502
Unique NameFC923502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 72/172 (41.86%), Postives = 95/172 (55.23%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+NG KMP  GLG WQ+    V E        AGYRHID A  Y NE+ +G  L+       + RED++I +KLW  +   E    A + + Q L +DY+DLYL+HWP    K  +S   +  L      +W+A E LY   K RAIGVSNF +  L+D+L +  VTP VNQ
Sbjct:   11 LSNGVKMPQFGLGVWQSPAGEVTENAVNWALCAGYRHIDTAAIYKNEESVGAGLRA----SGVPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWP--RGKDILSKEGKKYL-----DSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQ 171          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 73/186 (39.25%), Postives = 113/186 (60.75%), Query Frame = 3
Query:  156 YFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            +  LN+G  +P IGLGT+ + P  V     IA+K A   GYRHID AY Y NE E+G  +++   +G +KRE+++   KLW  DH PE V  A++RTLQ L++DY+DLY++  P+  K G     P+D        + ++ +TW+A+EA  D+G  +++GVSNF+ ++L+ +L     +  P  NQ
Sbjct:    9 HIPLNDGNSIPIIGLGTY-SDPRPVPGKTFIAVKTAIDEGYRHIDGAYVYRNEHEVGEAIREKVAEGKVKREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMPMAFKPG-EEFYPKDENGRVIYHKSNLCATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKYKPVTNQ 192          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1CN_HORSE (Aldo-keto reductase family 1 member C23 OS=Equus caballus GN=AKR1C23 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.145e-29
Identity = 71/171 (41.52%), Postives = 108/171 (63.16%), Query Frame = 3
Query:  162 ELNNGAKMPPIGLGTW---QAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLL 647
            ELN+G  +  +G GT+   +   S   EA   AI  AG+RHIDCA+ Y NEKE+G  ++   +DG +KRED++  SKLW      + V  A++++L++LQ+DYVDLY++H+PV  K G   L P+D          D+ +TW+AME   D+G  ++IGVSNF+ ++L+ +L
Sbjct:    9 ELNDGHFIHALGFGTYAPNEVPKSKAVEATKSAI-DAGFRHIDCAHLYDNEKEVGLAIRSKIQDGTVKREDIFCTSKLWATSLRLQLVRPALEKSLKNLQLDYVDLYIIHFPVAVKPGEEHL-PQDEQGRMIFDTVDLCATWEAMEKCKDAGLTKSIGVSNFNRRQLEMIL 177          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: YTBE_BACSU (Uncharacterized oxidoreductase ytbE OS=Bacillus subtilis GN=ytbE PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.495e-29
Identity = 70/173 (40.46%), Postives = 98/173 (56.65%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKP-SVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+NG +MP  GLG +Q +  S +  A+  AI   GYR ID A  YGNE  +G  +++  E+  I REDL+I SK+W  D   E+   A + +L  L +DY+DLYL+HWPV  K                   W+A+E LY  G+ +AIGVSNF +  L+DL+  A + P +NQ
Sbjct:   11 LHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVH-GYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGK---------------YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQ 167          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.550e-29
Identity = 73/183 (39.89%), Postives = 112/183 (61.20%), Query Frame = 3
Query:  162 ELNNGAKMPPIGLGTWQAKP---SVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGF----ISLNPEDLLQP-DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            +LN+G  +P +G GT++ K    S   EA  +A+   GYRH+D AY Y  E+EIG  ++   + GV+KREDL+I +KLWC    PE V  A++++L+ LQ+DYVDLY++H+PV  K G     ++   + LL   D   TW+ +E   D+G  ++IGVSNF+ ++L+ +L     +  P  NQ
Sbjct:    9 KLNDGHLIPALGFGTYKPKEVPKSKSLEAACLAL-DVGYRHVDTAYAYQVEEEIGQAIQSKIKAGVVKREDLFITTKLWCTCFRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSGDNDFPVNEQGKSLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLERILNKPGLKYKPVCNQ 190          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.681e-29
Identity = 68/170 (40.00%), Postives = 106/170 (62.35%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLL 647
            L++G  +P IGLGT+    S    A A ++K A   GYRHID AY Y NE E+G  +++   +G ++RED++   KLW  +H PE V   ++RTL+ LQ+DYVDLY++  P+  K G   + P D        + ++ +TW+AMEA  D+G  +++GVSNF+ ++L+ +L
Sbjct:   12 LSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPG-DEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELIL 180          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29
Identity = 79/194 (40.72%), Postives = 114/194 (58.76%), Query Frame = 3
Query:  156 YFELNNGAKMPPIGLGTWQA--KPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWP-----VRTKKGFISL--NPED-------LLQPDIPSTWKAMEALY---DSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            YF LNNG ++P +GLGT     K +   +A+  AIK AGYRHID A+ Y  E  +G  +K+L EDG IKREDL+I +K+W      ++V ++++ +L+ L ++YVDL L HWP     ++  KG   L   P D           D   T+K +E +Y   +  + RAIGVSNFS++ L+ L++  RV P VNQ
Sbjct:   24 YFSLNNGVRIPALGLGTANPHEKLAETKQAVKAAIK-AGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVW--PVLWDEVDRSLNESLKALGLEYVDLLLQHWPLCFEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECRVKPTVNQ 214          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.653e-28
Identity = 75/184 (40.76%), Postives = 108/184 (58.70%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQ----AKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            LN+G  +P +G GT      AK  V+ +A  IAI   G+RH D AY Y  E+E+G  ++   EDG +KRED++  SKLW   H PE V   +++TL+  Q+DYVDLY++H+P+  + G I   P D          DI  TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQ
Sbjct:   10 LNDGNFIPVLGFGTTVPEKVAKDEVI-KATKIAIDN-GFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFF-PRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQ 190          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.159e-28
Identity = 75/174 (43.10%), Postives = 103/174 (59.20%), Query Frame = 3
Query:  162 ELNNGAKMPPIGLGTWQAKPSVVA-EAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            +L+NG +MP  GLG ++ +    A E++  AIK  GYR ID A  Y NE+ +G  +K   E GV  RE+L+I SK+W  D   E    A +++L+ LQ+DY+DLYL+HWP + K                  TW+A+E LY  GK RAIGVSNF V  L++LL+ A + P VNQ
Sbjct:   10 KLHNGVEMPWFGLGVFKVENGNEATESVKAAIKN-GYRSIDTAAIYKNEEGVGIGIK---ESGVA-REELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK---------------YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQ 163          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.071e-27
Identity = 77/174 (44.25%), Postives = 103/174 (59.20%), Query Frame = 3
Query:  183 MPPIGLGTWQAKPSVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVI-KREDLWIASKLWCCD-HAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLN-PEDLLQP--DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            MP +G+GT  A P   +E    A+ +A   GYRH D A  Y  E  +G  + +    G+I  R D+++ SK+WC D HA   VP A + TL++L +DYVDL LVHWPV    G      P++++ P  D+   W+ ME  +  G ARAIGVSNFS KKL+ LL +A V PAVNQ
Sbjct:   16 MPRVGMGT-AAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARE-TLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQ 187          
The following BLAST results are available for this feature:
BLAST of FC923502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
P100_LEIMA1.145e-2941.86Probable reductase OS=Leishmania major GN=P100/11E... [more]
AK1D1_RAT1.145e-2939.253-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
AK1CN_HORSE1.145e-2941.52Aldo-keto reductase family 1 member C23 OS=Equus c... [more]
YTBE_BACSU1.495e-2940.46Uncharacterized oxidoreductase ytbE OS=Bacillus su... [more]
AK1CD_MOUSE2.550e-2939.89Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]
AK1D1_HUMAN5.681e-2940.003-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
ARA1_YEAST9.690e-2940.72D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
DIDH_RAT1.653e-2840.763-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
GR_BACSU2.159e-2843.10Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
NADO1_ORYSJ1.071e-2744.25Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionC31705G05EF StrClemenN Citrus clementina cDNA clone C31705G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923502 ID=FC923502; Name=FC923502; organism=Citrus clementina; type=EST; length=734bp
GAATTTCTTTCCATGAATATGAAAATTTCTGCCATCTCCCCGCAAATTCA
ATCTCATCTCTCCACAAATTAAAAGGCCAGTGATCACTCACTGCCCCTGG
TCATTTCACACACATAACTTGGGAAATGGGCCAAATAGCAAACGATAACG
TTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGATTA
GGCACATGGCAGGCTAAACCTAGTGTTGTTGCCGAAGCCATTGCTATTGC
CATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATGGCA
ATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGAGTG
ATCAAGCGTGAGGATCTATGGATCGCCTCCAAGCTCTGGTGTTGTGATCA
TGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACTTGC
AGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACGAAG
AAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATATACC
AAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTCGAG
CTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTGAGA
GTTGCCCGTGTTACTCCTGCTGTTAACCAGTGGAATGCCACCCTGGATGG
CACAGGAAAGCTACATGATTTTGCAATCCAAGGG
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