FC923502

Overview
NameFC923502
Unique NameFC923502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.827e-27
Identity = 68/172 (39.53%), Postives = 93/172 (54.07%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            LN+G  +P +GLG WQ        A+A A+ QAGYRHID A  Y NE E G    +   +  + RED+++ +KLW  D   +    A D ++Q L +DY+DLYL+HWPV     F+              T+KA   L D G+ R+IGVSNF  + L  L+    + PAVNQ
Sbjct:    7 LNDGNSIPQVGLGVWQTPAEDTERAVAAAL-QAGYRHIDTAAAYRNETETG----RAIANSGVPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPVPENNKFV-------------DTFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQ 160          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: MORA_PSEPU (Morphine 6-dehydrogenase OS=Pseudomonas putida GN=morA PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 4.071e-27
Identity = 69/172 (40.12%), Postives = 97/172 (56.40%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            LNNG KMP +GLG + A     A AIA AI  +GYR ID A  Y NE ++G  ++    +  + R ++++ +KL+ CD+  E   +A D +L  L +DYVDLYL+HWP +     I              +WKA E +   G+ARAIGV NF   +L +L+  + V PAVNQ
Sbjct:   10 LNNGVKMPALGLGVFAASAEETASAIASAIS-SGYRLIDTARSYNNEAQVGEGIR----NSGVDRAEMFVTTKLFNCDYGYERALRAFDESLGRLGLDYVDLYLLHWPTKDWNATI-------------QSWKAAEKILGDGRARAIGVCNFLEDQLDELIAASDVVPAVNQ 163          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27
Identity = 71/188 (37.77%), Postives = 109/188 (57.98%), Query Frame = 3
Query:  162 ELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPV-----RTKKGFISLNPE--------DLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVA--RVTPAVNQ 680
            +LN GA +P +G GTW++  +    ++  A+K AGYRHID A  Y NE+E+G  +K    D  + RE+++I +KLW  +    D   A++++L+ L +DYVDLYL+HWPV     R   G +   P         D  + +   TW+ M+ L  +GK +A+GVSNFS+  +++LL     +V PA NQ
Sbjct:   13 KLNTGASIPVLGFGTWRSVDNNGYHSVIAALK-AGYRHIDAAAIYLNEEEVGRAIK----DSGVPREEIFITTKLWGTEQ--RDPEAALNKSLKRLGLDYVDLYLMHWPVPLKTDRVTDGNVLCIPTLEDGTVDIDTKEWNFIKTWELMQELPKTGKTKAVGVSNFSINNIKELLESPNNKVVPATNQ 193          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27
Identity = 74/190 (38.95%), Postives = 103/190 (54.21%), Query Frame = 3
Query:  147 NVQYFELNN-GAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTK---------KGFISLNPEDLL--QPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            +  Y  LN  G KMP  G G W+       E +  AIK  GYR  D A  YGNE E+G  + K   +G++KREDL+I +KLW   H+ + V    DR L+D  ++Y DLYL+H+PV  +          G+   + + L   Q  I   W  +E + D+G AR IGV+NF+ + + DLL  AR+ PAV Q
Sbjct:    2 STDYLTLNRTGDKMPIRGFGCWKIDTKDCEETVYQAIK-TGYRLFDGACDYGNEVEVGRGINKAINEGLVKREDLFIVTKLWNTFHSKKHVRALFDRQLKDTGLEYFDLYLIHFPVPLQYVDPATVYPPGWYVGDAKSLQFEQSPIHECWAELEKIVDAGLARNIGVANFNCQAILDLLTYARIKPAVLQ 190          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.317e-27
Identity = 68/183 (37.16%), Postives = 111/183 (60.66%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            L++G  +P IGLGT+ + P  V     +A+K A   GYRHID AY Y NE E+G  +++   +G +KRE+++   KLW  +H P  V  A++RTL+ L++DY+DLY++  P+  K G   + P D        + ++ +TW+A+EA  D+G  +++GVSNF+ ++L+ +L     +  P  NQ
Sbjct:   12 LSDGNNIPLIGLGTY-SDPRPVPGKTYVAVKTAIDEGYRHIDGAYVYHNEHEVGEAIREKIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELPMAFKPG-KEIYPRDENGRIIYDKTNLCATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPGLKYKPVTNQ 192          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.639e-26
Identity = 67/182 (36.81%), Postives = 103/182 (56.59%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGT---WQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED-----LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            LN+G  +P +G GT    +   S   E   IAI  AG+ H D A  Y  E  +G  ++    DG ++RED++  SK+WC    PE V  +++R+LQ LQ DYVDLYL+H+P+  K G  +   ++       + D+ +TW+AME   D+G  ++IGVSNF+ ++L+ +L     +  P  NQ
Sbjct:   10 LNDGNFIPVLGFGTALPLECPKSKAKELTKIAI-DAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLHPELVRASLERSLQKLQFDYVDLYLIHYPMALKPGEENFPVDEHGKLIFDRVDLCATWEAMEKCKDAGLTKSIGVSNFNYRQLEMILNKPGLKYKPVCNQ 190          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1D1_RABIT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagus cuniculus GN=AKR1D1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.447e-26
Identity = 63/170 (37.06%), Postives = 104/170 (61.18%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED------LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLL 647
            L +G  +P IGLGT+    +    + A ++K A   GYRHID AY Y NE E+G   ++   +G ++RED++   KLW  +H P  V   ++RTL+ L++DY+DLY++  P+  K G + + P D        + ++ +TW+A+EA  D+G  +++GVSNF+ ++L+ LL
Sbjct:   12 LGDGNSIPIIGLGTYSEPKTTPKGSCATSVKIAIDTGYRHIDGAYIYQNEHEVGETFREKIAEGKVRREDIFYCGKLWATNHDPVMVRPTLERTLKVLKLDYIDLYIIEIPMAFKPGDV-VYPRDENGKWLYHKTNLCATWEALEACKDAGLVKSLGVSNFNRQQLELLL 180          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.879e-26
Identity = 75/174 (43.10%), Postives = 98/174 (56.32%), Query Frame = 3
Query:  183 MPPIGLGTWQAKPSVVAEAIAIAIKQA---GYRHIDCAYFYGNEKEIGTELKKLFEDGVI-KREDLWIASKLWCCD-HAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLN-PEDLLQP--DIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            MP IG+GT  A P   +E    A+ +A   GYRH D A  Y  E  +   + +    G++  R D+++ SKLWC D HA   VP A + TL++L +DYVDL LVHWP     G      P++ + P  D+   W+ ME  +  G ARAIGVSNFS KKL+ LL  A V PA NQ
Sbjct:   18 MPRIGMGT-AAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARE-TLRNLGMDYVDLLLVHWPATVAPGSYDFPFPKEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQ 189          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.003e-25
Identity = 69/190 (36.32%), Postives = 108/190 (56.84%), Query Frame = 3
Query:  141 NDNVQYFELNNGAKMPPIGLGTW---QAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED---LL--QPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            N      +LN+G  +P +G GT    +   S   E   IAI  AG+ H D A+ Y  E  +G  +++   +G  +RED++  SKLWC    PE V  +++ +L+ LQ+DYVDLYL+H+P+  K G  +   ++   LL    D+ +TW+AME   D+G A++IGVSNF+ ++L+ +L     +  P  NQ
Sbjct:    2 NSKCHCVKLNDGHFIPVLGFGTAMPSELPKSKAKEVTKIAI-DAGFHHFDSAFVYNTEDHVGEAIREKIANGTTRREDIFYTSKLWCTSLHPELVRSSLECSLKKLQLDYVDLYLIHFPMALKPGDENFPVDEHGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKYKPVCNQ 190          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: Y1985_MYCSK (Uncharacterized oxidoreductase Mkms_1985 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1985 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            LN+G  +P +GLG WQ  P     A+A A+  AGYRH+D A  YGNE++ G   + + + G + R  +++ +KLW  +   +    A + ++  L +DY+DLYL+HWPV  K  F+              T+KA   L + G+ R+IGVSNF  + L+ L+    + PAVNQ
Sbjct:    8 LNDGNSIPQVGLGVWQTPPEDTERAVAAALA-AGYRHVDTAAAYGNEEQTG---RAIAQSG-LDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNLFV-------------DTFKAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQ 161          
The following BLAST results are available for this feature:
BLAST of FC923502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
Y2408_MYCS21.827e-2739.53Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
MORA_PSEPU4.071e-2740.12Morphine 6-dehydrogenase OS=Pseudomonas putida GN=... [more]
YPR1_YEAST5.317e-2737.77Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
DTDH_MUCMU5.317e-2738.954-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
AK1D1_MOUSE5.317e-2737.163-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
AK1CL_MOUSE2.639e-2636.81Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
AK1D1_RABIT3.447e-2637.063-oxo-5-beta-steroid 4-dehydrogenase OS=Oryctolagu... [more]
NADO2_ORYSJ5.879e-2643.10Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
AK1CL_RAT1.003e-2536.32Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
Y1985_MYCSK2.918e-2536.63Uncharacterized oxidoreductase Mkms_1985 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionC31705G05EF StrClemenN Citrus clementina cDNA clone C31705G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923502 ID=FC923502; Name=FC923502; organism=Citrus clementina; type=EST; length=734bp
GAATTTCTTTCCATGAATATGAAAATTTCTGCCATCTCCCCGCAAATTCA
ATCTCATCTCTCCACAAATTAAAAGGCCAGTGATCACTCACTGCCCCTGG
TCATTTCACACACATAACTTGGGAAATGGGCCAAATAGCAAACGATAACG
TTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGATTA
GGCACATGGCAGGCTAAACCTAGTGTTGTTGCCGAAGCCATTGCTATTGC
CATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATGGCA
ATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGAGTG
ATCAAGCGTGAGGATCTATGGATCGCCTCCAAGCTCTGGTGTTGTGATCA
TGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACTTGC
AGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACGAAG
AAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATATACC
AAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTCGAG
CTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTGAGA
GTTGCCCGTGTTACTCCTGCTGTTAACCAGTGGAATGCCACCCTGGATGG
CACAGGAAAGCTACATGATTTTGCAATCCAAGGG
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