FC923502

Overview
NameFC923502
Unique NameFC923502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: Y1919_MYCSJ (Uncharacterized oxidoreductase Mjls_1919 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1919 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 62/172 (36.05%), Postives = 96/172 (55.81%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            LN+G  +P +GLG WQ  P     A+A A+  AGYRH+D A  YGNE++ G   + + + G + R  +++ +KLW  +   +    A + ++  L +DY+DLYL+HWPV  K  F+              T++A   L + G+ R+IGVSNF  + L+ L+    + PAVNQ
Sbjct:    8 LNDGNSIPQVGLGVWQTPPEDTERAVAAALA-AGYRHVDTAAAYGNEEQTG---RAIAQSG-LDRSQVYLVTKLWNSEQGYDATLAAFEASVDRLGVDYLDLYLIHWPVPEKNLFV-------------DTFRAFARLREDGRIRSIGVSNFEPEHLRVLIDSTGIVPAVNQ 161          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: AK1CD_MESAU (Aldo-keto reductase family 1 member C13 OS=Mesocricetus auratus GN=AKR1C13 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 65/180 (36.11%), Postives = 106/180 (58.89%), Query Frame = 3
Query:  171 NGAKMPPIGLGTW---QAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPED-----LLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRV--ARVTPAVNQ 680
            +G  +P +G GT+   +   S   EA  +AI   GYRHID AY Y  E+EIG  ++   + G++KRED++I +KLWC    PE V  ++++    LQ+++VDL+++H+PV  K G      ++     L   D  +TW+A+E   D+G  ++IGVSNF++++L+ +L     +  P  NQ
Sbjct:   12 DGHCIPALGFGTYKPIEVPKSKAMEAANLAIG-VGYRHIDTAYAYQIEEEIGQAIQSNIKAGIVKREDMFITTKLWCTCFQPELVRPSLEKXXXKLQLEHVDLFIMHYPVPMKAGDNDFPLDEQGKLLLDTVDFCATWEALEKXXDAGLVKSIGVSNFNMRQLERILNKPGLKYKPVCNQ 190          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: DKGA_ECOLI (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli (strain K12) GN=dkgA PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 72/196 (36.73%), Postives = 99/196 (50.51%), Query Frame = 3
Query:  147 NVQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ--------------WNAT 692
            N    +L +G  MP +GLG WQA    V  AI  A+ + GYR ID A  Y NE+ +G  LK    +  + RE+L+I +KLW  DH  +   +A+  +L+ LQ+DY+DLYL+HWPV     ++               WK M  L   G  ++IGV NF +  LQ L+    VTP +NQ              WNAT
Sbjct:    3 NPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKAL-EVGYRSIDTAAAYKNEEGVGKALK----NASVNREELFITTKLWNDDH--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVE-------------AWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNAT 178          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: DKGA_YERPE (2,5-diketo-D-gluconic acid reductase A OS=Yersinia pestis GN=dkgA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24
Identity = 71/192 (36.98%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  162 ELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCD-HAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ--------------WNAT 692
            +L +G  MP +GLG WQA       A++ A+ + GYR ID A  Y NE+ +G  LK       + R++L+I +KLW  D H P+   +A++ +LQ LQ+DYVDLYL+HWP             D  Q    S W+ +  L + G  R+IGV NF +  LQ L+    + P VNQ              WNAT
Sbjct:    8 KLYDGRLMPQLGLGVWQASIQETELAVSKAL-EVGYRSIDTAAIYKNEEGVGKALKA----AAVARDELFITTKLWNDDQHNPQ---QALETSLQKLQLDYVDLYLIHWP-------------DPKQDHYVSAWRELVTLKEQGLIRSIGVCNFHIPHLQRLIDETGIAPTVNQIELHPLLQQRQLHAWNAT 178          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: DKGA_ECO57 (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli O157:H7 GN=dkgA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.186e-24
Identity = 71/196 (36.22%), Postives = 97/196 (49.49%), Query Frame = 3
Query:  147 NVQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ--------------WNAT 692
            N    +L +G  MP +GLG WQA    V  AI  A+ + GYR  D A  Y NE+ +G  LK    +  + RE+L+I +KLW  DH      +A+  +L+ LQ+DY+DLYL+HWPV     ++               WK M  L   G  ++IGV NF +  LQ L+    VTP +NQ              WNAT
Sbjct:    3 NPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKAL-EVGYRSFDTAAAYKNEEGVGKALK----NASVNREELFITTKLWNDDH--NRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVE-------------AWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNAT 178          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.226e-23
Identity = 71/196 (36.22%), Postives = 97/196 (49.49%), Query Frame = 3
Query:  147 NVQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ--------------WNAT 692
            N     L +G  MP +GLG W+A    V  AI  A+ + GYR ID A  Y NE+ +G  LK       + RE+L+I +KLW  D   +   +A+  +L+ LQ+DY+DLYL+HWPV     ++               WK M AL   G  ++IGV NF +  LQ L+    VTP +NQ              WNAT
Sbjct:    3 NPTIIRLQDGNVMPQLGLGVWKASNEEVIAAIHKAL-EVGYRSIDTATAYQNEEGVGKALKA----ASVAREELFITTKLWNDDQ--KRPREALQESLKKLQLDYLDLYLMHWPVPAIDHYVD-------------AWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNAT 178          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23
Identity = 70/196 (35.71%), Postives = 96/196 (48.98%), Query Frame = 3
Query:  147 NVQYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ--------------WNAT 692
            N     L +G  MP +GLG W+A    V  AI  A+ + GYR ID A  Y NE+ +G  LK       + RE+L+I +KLW  D   +   +A+  +L+ LQ+DY+DLYL+HWPV     ++               WK M AL   G  ++IGV NF +  LQ L+    V P +NQ              WNAT
Sbjct:    3 NPTIIRLQDGNVMPQLGLGVWKASNEEVIAAIHKAL-EVGYRSIDTATAYQNEEGVGKALKA----ASVAREELFITTKLWNDDQ--KRPREALQESLKKLQLDYLDLYLMHWPVPAIDHYV-------------DAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVPPVINQIELHPLMQQRQLHAWNAT 178          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            LN+G  +P +G G ++  P+    A+  A+ + GYRHID A  YGNE+ +G  +        I R+DL+I +KLW   H  ++   A+  +L  L +D VDLYLVHWP      ++               W+ M  L  +G  R+IGVSN  V  L+ ++    V PAVNQ
Sbjct:    8 LNDGNSIPQLGYGVFKVPPADTQRAVEEAL-EVGYRHIDTAAIYGNEEGVGAAIAA----SGIARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYV-------------HAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQ 161          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: YOF5_CAEEL (Uncharacterized oxidoreductase ZK1290.5 OS=Caenorhabditis elegans GN=ZK1290.5 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21
Identity = 61/172 (35.47%), Postives = 98/172 (56.98%), Query Frame = 3
Query:  165 LNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARVTPAVNQ 680
            L+N  +MP IGLGT  +      +A+  +IK+ GYR ID A  YG EK++G  +K       + RE++++++KLW  D   ++V  A   + + LQ DY+D+Y++H P         +N ++  +     TW+ ME LY+    R+IGVSN+S++ L +LL  A + P  NQ
Sbjct:    7 LSNNVEMPLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKNCS----VPREEMFLSTKLWPVD-CGDEVYNAFQTSCEKLQTDYLDMYMIHMPQLPDW---IVNQKETKE----KTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQ 165          
BLAST of FC923502 vs. ExPASy Swiss-Prot
Match: YJ66_YEAST (Uncharacterized oxidoreductase YJR096W OS=Saccharomyces cerevisiae GN=YJR096W PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21
Identity = 64/181 (35.36%), Postives = 98/181 (54.14%), Query Frame = 3
Query:  153 QYFELNNGAKMPPIGLGTWQAKPSVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKK-LFED-GVIKREDLWIASKLWCCDHAPEDVPKAMDRTLQDLQ-IDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLRVARV--TPAVNQ 680
            ++++L+NG K+P I LGT+    S  AE +   +K  GYRH D A  YGNEKE+G  + K L ED G  KRE+++  +KLW   +  +    A+ + L ++  + Y+DL L+H P+   K  +              TW+AM+   D G  ++IGVSN+  K + +LL    +   P VNQ
Sbjct:    4 KFYKLSNGFKIPSIALGTYDIPRSQTAEIVYEGVK-CGYRHFDTAVLYGNEKEVGDGIIKWLNEDPGNHKREEIFYTTKLWNSQNGYKRAKAAIRQCLNEVSGLQYIDLLLIHSPLEGSKLRLE-------------TWRAMQEAVDEGLVKSIGVSNYGKKHIDELLNWPELKHKPVVNQ 170          
The following BLAST results are available for this feature:
BLAST of FC923502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
Y1919_MYCSJ6.500e-2536.05Uncharacterized oxidoreductase Mjls_1919 OS=Mycoba... [more]
AK1CD_MESAU6.500e-2536.11Aldo-keto reductase family 1 member C13 OS=Mesocri... [more]
DKGA_ECOLI1.891e-2436.732,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
DKGA_YERPE2.470e-2436.982,5-diketo-D-gluconic acid reductase A OS=Yersinia... [more]
DKGA_ECO577.186e-2436.222,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
DKGA_SALTY1.226e-2336.222,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]
DKGA_SALTI6.084e-2335.71Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
DKGA_CORSC6.726e-2235.472,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
YOF5_CAEEL2.556e-2135.47Uncharacterized oxidoreductase ZK1290.5 OS=Caenorh... [more]
YJ66_YEAST5.694e-2135.36Uncharacterized oxidoreductase YJR096W OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionC31705G05EF StrClemenN Citrus clementina cDNA clone C31705G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923502 ID=FC923502; Name=FC923502; organism=Citrus clementina; type=EST; length=734bp
GAATTTCTTTCCATGAATATGAAAATTTCTGCCATCTCCCCGCAAATTCA
ATCTCATCTCTCCACAAATTAAAAGGCCAGTGATCACTCACTGCCCCTGG
TCATTTCACACACATAACTTGGGAAATGGGCCAAATAGCAAACGATAACG
TTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGATTA
GGCACATGGCAGGCTAAACCTAGTGTTGTTGCCGAAGCCATTGCTATTGC
CATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATGGCA
ATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGAGTG
ATCAAGCGTGAGGATCTATGGATCGCCTCCAAGCTCTGGTGTTGTGATCA
TGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACTTGC
AGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACGAAG
AAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATATACC
AAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTCGAG
CTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTGAGA
GTTGCCCGTGTTACTCCTGCTGTTAACCAGTGGAATGCCACCCTGGATGG
CACAGGAAAGCTACATGATTTTGCAATCCAAGGG
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