FC923506

Overview
NameFC923506
Unique NameFC923506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.122e-95
Identity = 171/203 (84.24%), Postives = 182/203 (89.66%), Query Frame = 1
Query:    1 QAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            QAGARVIVTEIDPICALQALMEG+Q+LTLEDVVS+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDM GLETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV            T+LTK Q+DYIS+  +GPYK   YRY
Sbjct:  283 QAGARVIVTEIDPICALQALMEGIQILTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMNGLETYPGVKRITIKPQTDRWVFPETKTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKSQSDYISIPIEGPYKLRLYRY 485          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.764e-94
Identity = 170/202 (84.16%), Postives = 181/202 (89.60%), Query Frame = 1
Query:    4 AGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            AGARVIVTEIDPICALQALMEGL VL LEDVVS+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLE++PGVKRITIKPQTDR VFP+TNSGI+VLAEGRLMNLGCATGHPSFVMS SFTNQVIAQLELWKE+++GKYEKKVYVLPKHLDEKV            T+LT  QADYISV  +GPYKP HYRY
Sbjct:  284 AGARVIVTEIDPICALQALMEGLPVLRLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLESFPGVKRITIKPQTDRRVFPDTNSGILVLAEGRLMNLGCATGHPSFVMSSSFTNQVIAQLELWKERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTPSQADYISVPVEGPYKPAHYRY 485          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_BACFR (Adenosylhomocysteinase OS=Bacteroides fragilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.205e-67
Identity = 127/201 (63.18%), Postives = 155/201 (77.11%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTE+DPICALQA MEG +V+T+ED   + +IFVTTTGN DII +DHM++MK+ AIVCNIGHFDNEI +  L+ YPG+KR+ IKPQ DR+ FP+ +S II+LA+GRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KY+  VY LPKHLDE+V            T+LT EQA YI VS DGPYK  HYRY
Sbjct:  292 GARVLVTEVDPICALQAAMEGFEVVTMEDACKEGNIFVTTTGNIDIIRIDHMEQMKDQAIVCNIGHFDNEIQVDALKHYPGIKRVNIKPQVDRYYFPDGHS-IILLADGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFNK----KYDINVYRLPKHLDEEVARLHLEKIGVKLTKLTPEQAAYIGVSVDGPYKADHYRY 487          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.880e-67
Identity = 126/201 (62.69%), Postives = 154/201 (76.62%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVIVTEIDPICALQA MEG +V T+E  +  ADI+VTTTGNKDII V+H++ MK+ AIVCNIGHFDNEI +  L+    V++I IKPQ D++VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  283 GARVIVTEIDPICALQASMEGFEVNTIESTLGRADIYVTTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKALKDVQKINIKPQVDKYVFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.761e-67
Identity = 125/201 (62.19%), Postives = 154/201 (76.62%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTEIDPICALQA MEG +V T+E  +  ADI+VTTTGNKDII V+H++ MK+ AIVCNIGHFDNEI +  L+    V++I IKPQ D++VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  283 GARVVVTEIDPICALQASMEGFEVNTIESTLGRADIYVTTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKALKDVQKINIKPQVDKYVFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.761e-67
Identity = 125/201 (62.19%), Postives = 154/201 (76.62%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTEIDPICALQA MEG +V T+E  +  ADI+VTTTGNKDII V+H++ MK+ AIVCNIGHFDNEI +  L+    V++I IKPQ D++VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  283 GARVVVTEIDPICALQASMEGFEVNTIESTLGRADIYVTTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKALKDVQKINIKPQVDKYVFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.761e-67
Identity = 125/201 (62.19%), Postives = 155/201 (77.11%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVIVTEIDPICALQA MEG +V T+E  +  ADI+VTTTGNKDII V+H++ MK+ AIVCNIGHFDNEI +  L+    V++I IKPQ D++VFP  N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V  +GP+KP HYRY
Sbjct:  283 GARVIVTEIDPICALQASMEGFEVNTIESTLGRADIYVTTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALKALKDVQKINIKPQVDKYVFPNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY 480          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.429e-66
Identity = 127/201 (63.18%), Postives = 149/201 (74.13%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVIVTEIDPICALQA MEG QV T+E+ + + +I+VTTTGNKD+I ++HMKKMK+ AIVCNIGHFDNEI +  L  + G  RI IKPQ D++VF E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      Y+  VY LPKHLDE+V            T L+KEQADYI V  +GPYKP HYRY
Sbjct:  276 GARVIVTEIDPICALQAAMEGFQVTTIEEALEEGNIYVTTTGNKDVITLEHMKKMKDEAIVCNIGHFDNEIQVDALNNFKGATRINIKPQVDKYVF-EDGRCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NNYDVDVYRLPKHLDEEVARLHLGQIGVKLTTLSKEQADYIGVPVEGPYKPEHYRY 471          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.867e-66
Identity = 126/201 (62.69%), Postives = 154/201 (76.62%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTE+DPICALQA MEG +V+T+ED  ++ +IFVTTTGN DII +DHM+KMK+ AIVCNIGHFDNEI +  L+ Y G+K + IKPQ DR+ FP+ +S I++LA+GRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KYE  VY LPKHLDE+V            T+LT EQA YI VS DGPYK  HYRY
Sbjct:  281 GARVLVTEVDPICALQAAMEGFEVVTMEDACTEGNIFVTTTGNIDIIRIDHMEKMKDQAIVCNIGHFDNEIQVDALKHYSGIKCVNIKPQVDRYYFPDGHS-ILLLADGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFNK----KYEVNVYRLPKHLDEEVARLHLEKIGVKLTKLTPEQAAYIGVSVDGPYKAEHYRY 476          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.184e-66
Identity = 128/201 (63.68%), Postives = 152/201 (75.62%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVIVTEIDPICALQA MEG +V T+ED V + +IFVTTTGNKD+I ++HMK+M++ AIVCNIGHFDNEI +  L   P VK I IKPQ D+++FP  N  + +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW++    +Y   VY LPK LDE+V            TRLT EQA+YI VSADGPYKP HYRY
Sbjct:  276 GARVIVTEIDPICALQAAMEGFEVATMEDAVHEGNIFVTTTGNKDVITLEHMKQMRDEAIVCNIGHFDNEIQVDKLNNDPTVKIINIKPQVDKYIFPNGNC-MYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQK----EYAVDVYRLPKALDEEVARLHLEQIGVRLTRLTPEQAEYIGVSADGPYKPEHYRY 471          
The following BLAST results are available for this feature:
BLAST of FC923506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_WHEAT1.122e-9584.24Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_PHASS2.764e-9484.16Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_BACFR2.205e-6763.18Adenosylhomocysteinase OS=Bacteroides fragilis GN=... [more]
SAHH_XANAC2.880e-6762.69Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_XANOP3.761e-6762.19Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM3.761e-6762.19Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANC53.761e-6762.19Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_CHLP81.429e-6663.18Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_BACTN1.867e-6662.69Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_CHLCH3.184e-6663.68Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31705G09EF StrClemenN Citrus clementina cDNA clone C31705G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923506 ID=FC923506; Name=FC923506; organism=Citrus clementina; type=EST; length=702bp
CAAGCCGGTGCGCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCT
CCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGACGTCGTCT
CCGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATG
GTTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGG
TCACTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTG
TTAAGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAG
ACCAACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGG
ATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACC
AGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTAC
GAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGC
TCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGC
AGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCAC
TACAGGTACTAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATGTT
TTGAGGGAAAGAAAACAAATATTTGGCCGGCTTGATGTTTTNCATGATGA
TC
back to top