FC923506

Overview
NameFC923506
Unique NameFC923506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_XANCP (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris GN=ahcY PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.432e-66
Identity = 124/201 (61.69%), Postives = 152/201 (75.62%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVIVTEIDPICALQA MEG +V T+E  +   DI+VTTTGNKDII V+H++ MK+ AIVCNIGHFDNEI +  L    GV++I IKPQ D++VF   N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ +  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  283 GARVIVTEIDPICALQASMEGFEVNTIESTLGRGDIYVTTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALNALKGVEKINIKPQVDKYVFGNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDS--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_XANC8 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ahcY PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.432e-66
Identity = 124/201 (61.69%), Postives = 152/201 (75.62%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVIVTEIDPICALQA MEG +V T+E  +   DI+VTTTGNKDII V+H++ MK+ AIVCNIGHFDNEI +  L    GV++I IKPQ D++VF   N+ I +LA+GRL+NLGCATGHPSFVMS SF NQ +AQ++LW+++ +  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  283 GARVIVTEIDPICALQASMEGFEVNTIESTLGRGDIYVTTTGNKDIITVEHLQAMKDQAIVCNIGHFDNEIQVDALNALKGVEKINIKPQVDKYVFGNGNA-IFLLADGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWEKRDS--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 125/201 (62.19%), Postives = 150/201 (74.63%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQA+MEG  V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDNEIDM GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  298 GARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 125/201 (62.19%), Postives = 150/201 (74.63%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQA+MEG  V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDNEIDM GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  298 GARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 125/201 (62.19%), Postives = 150/201 (74.63%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQA+MEG  V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDNEIDM GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  298 GARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 125/201 (62.19%), Postives = 150/201 (74.63%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQA+MEG  V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDNEIDM GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  298 GARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 1.580e-65
Identity = 125/201 (62.19%), Postives = 150/201 (74.63%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQA+MEG  V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDNEIDM GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  298 GARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.521e-65
Identity = 126/201 (62.69%), Postives = 153/201 (76.12%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVI+TE+DPICALQA+MEG QV  +E+VV D DIFVT TGN DII VD M +MK+ AIV NIGHFDNEID  GL  YPG+K I IKP+ D W FP+ ++ I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQL+L++++  G  E KVY LPKHLDE+V            T+LT++QADYI+V  +GPYK   YRY
Sbjct:  289 GARVIITEVDPICALQAVMEGYQVRRIEEVVKDVDIFVTCTGNCDIISVDMMAQMKDKAIVGNIGHFDNEIDTDGLMKYPGIKHIPIKPEYDMWEFPDGHA-ILLLAEGRLLNLGCATGHPSFVMSMSFTNQTLAQLDLYEKR--GNLEMKVYTLPKHLDEEVVRLHLGSLDVHLTKLTQKQADYINVPVEGPYKSDAYRY 486
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.598e-65
Identity = 125/201 (62.19%), Postives = 150/201 (74.63%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQA+MEG  V+T+ED + DADI VT+TGNKDIIM++H+K MK+++I+ NIGHFDNEIDM GLE   G  R  IKPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  295 GARVSVTEIDPINALQAMMEGFDVVTVEDAIGDADIVVTSTGNKDIIMLEHIKAMKDHSILGNIGHFDNEIDMAGLER-SGATRTNIKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492
[Close]
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.598e-65
Identity = 125/201 (62.19%), Postives = 150/201 (74.63%), Query Frame = 1 
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQA+MEG  V+T+ED + DADI VT+TGNKDIIM++H+K MK+++I+ NIGHFDNEIDM GLE   G  R  IKPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  295 GARVSVTEIDPINALQAMMEGFDVVTVEDAIGDADIVVTSTGNKDIIMLEHIKAMKDHSILGNIGHFDNEIDMAGLER-SGATRTNIKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492
The following BLAST results are available for this feature:
BLAST of FC923506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_XANCP5.432e-6661.69Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANC85.432e-6661.69Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_MYCTU1.580e-6562.19Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA1.580e-6562.19Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCBT1.580e-6562.19Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP1.580e-6562.19Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBO1.580e-6562.19Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_TRIVA3.521e-6562.69Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]
SAHH_MYCUA4.598e-6562.19Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM4.598e-6562.19Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]

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Properties
Property NameValue
Genbank descriptionC31705G09EF StrClemenN Citrus clementina cDNA clone C31705G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923506 ID=FC923506; Name=FC923506; organism=Citrus clementina; type=EST; length=702bp
CAAGCCGGTGCGCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCT
CCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGACGTCGTCT
CCGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATG
GTTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGG
TCACTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTG
TTAAGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAG
ACCAACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGG
ATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACC
AGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTAC
GAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGC
TCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGC
AGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCAC
TACAGGTACTAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATGTT
TTGAGGGAAAGAAAACAAATATTTGGCCGGCTTGATGTTTTNCATGATGA
TC
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