FC923506

Overview
NameFC923506
Unique NameFC923506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_METAC (Adenosylhomocysteinase OS=Methanosarcina acetivorans GN=ahcY PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.146e-23
Identity = 70/190 (36.84%), Postives = 101/190 (53.16%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSG---IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYIS 567
            GA VIVTE+DPI AL+A M+G +V+ + D     +IFVTTTGN+DI+  +H K M + A++ N GHF+ EIDM  L +      +    +T R    E + G   I V+AEGRL+NL    GHP+ VM  SF NQ +    +    +       V+ +P+ +D  V              LT +Q  Y++
Sbjct:  226 GANVIVTEVDPIRALEARMDGYRVMRMADAARLGEIFVTTTGNRDILTAEHFKVMPDGAVLANSGHFNVEIDMEALTS------LAKSVKTVRHNIKEYDIGDRRINVIAEGRLVNLAAGDGHPAEVMDMSFANQALCVRYI----AENTLLNGVHGVPRGIDTYVAKLKLESMGISIDELTSKQECYMT 405          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_HALWD (Adenosylhomocysteinase OS=Haloquadratum walsbyi (strain DSM 16790) GN=achY PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23
Identity = 71/198 (35.86%), Postives = 106/198 (53.54%), Query Frame = 1
Query:   10 ARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM-----LGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADG 582
            A VIVTE++P  AL+A MEG +V+ + +  +  D+FVTTTGN+D+I  +  + M + AI+ N GHFD EI++     L ++TY     +      D          + VLAEGRL+NL    A GHP+ VM  SF  Q +   EL + KS+  Y+  V+ +P  LD +V              LT+ Q++Y+   + G
Sbjct:  243 ANVIVTEVEPRRALEAHMEGYEVMPMNEAATRGDVFVTTTGNRDVITQEDFEVMSDGAILANAGHFDVEINLEELSELAIDTYEARDGVQAYELGD-------GRRLNVLAEGRLVNLAAPIALGHPAEVMDQSFGIQAVCVRELIENKSS--YDAGVHNVPDELDREVAEIKLKAEGVDIDSLTQTQSEYLDSWSHG 431          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_THEAC (Adenosylhomocysteinase OS=Thermoplasma acidophilum GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23
Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADG 582
            GA VIVTEIDPI A +A+M+G QV  + + + DAD+ +T TG KD++  +     K N ++ N GHF+NE+ +  +E    ++   ++    R+   E  + + ++A+GRL+NL    GHP  +M  SF  Q +    L   K+  K E+KVY +P  +D  V             +L +EQ  Y++   +G
Sbjct:  222 GANVIVTEIDPIKANEAIMDGFQVRRMNNAIRDADMVITATGMKDVVKYEDALVAKKNIVLANAGHFNNEVAVSEIEK-RSLEVNEVREFVKRYRL-ENGNTVDIIADGRLVNLAAGQGHPVEIMDLSFALQALTAEYL--VKNHDKLERKVYPVPADIDRYVAEIRLKQFGGELDQLNEEQIKYLNSWDEG 409          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_METTH (Adenosylhomocysteinase OS=Methanobacterium thermoautotrophicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23
Identity = 69/196 (35.20%), Postives = 103/196 (52.55%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRIT--IKPQTDRWVFPETNSGIIVLAEGRLMNLGC--ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADG 582
            GA VIVTE+DPI AL+A M+G +V+ + D V +ADI +T TGN D++       MK+  ++ N GHF+ EI+   LE    + R T  +K   + ++ P+    I +LAEGRL+NL      GHP+ +M  SF  Q ++   L +EK     +  VY  P  +D  V              LT++Q  Y+    +G
Sbjct:  229 GASVIVTEVDPIRALEARMDGFRVMKVSDAVKEADILITATGNTDVVSESEFMNMKDGCVMANSGHFNVEINREALEE---LSRETGKVKEDIEVFIMPDGRK-IYLLAEGRLVNLASERGQGHPAEIMDMSFAMQALSARHLLQEKP----DPGVYRAPDEIDLMVARMKLDAMGIEIDELTEKQRLYLENWEEG 416          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_HALSA (Adenosylhomocysteinase OS=Halobacterium salinarium GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18
Identity = 64/195 (32.82%), Postives = 96/195 (49.23%), Query Frame = 1
Query:   10 ARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL--------ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLG--CATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYI 564
            A VIVTE++P  AL+A MEG  V+ + +     D+F+TTTGNK++I   H ++M +  ++ N GHFD E+++  L        E   GV+   +               + VLAEGRL+NL      GHP  VM  SF  Q +   EL   +   +Y   V+ +P  LD ++              LT +QA+Y+
Sbjct:  238 ANVIVTEVEPRRALEAHMEGYDVMPMAEAAEVGDVFLTTTGNKNVITRAHFERMDDGVVLANAGHFDVEVNLDHLSELAVSEREAREGVREYEL----------ADGRRLNVLAEGRLVNLASPIGLGHPVGVMDQSFGVQAVCVRELVANRE--EYAAGVHNVPDELDIEIAEIKLAAEGVEYDALTDDQAEYM 420          
The following BLAST results are available for this feature:
BLAST of FC923506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_METAC1.146e-2336.84Adenosylhomocysteinase OS=Methanosarcina acetivora... [more]
SAHH_HALWD2.552e-2335.86Adenosylhomocysteinase OS=Haloquadratum walsbyi (s... [more]
SAHH_THEAC3.334e-2333.33Adenosylhomocysteinase OS=Thermoplasma acidophilum... [more]
SAHH_METTH9.699e-2335.20Adenosylhomocysteinase OS=Methanobacterium thermoa... [more]
SAHH_HALSA1.110e-1832.82Adenosylhomocysteinase OS=Halobacterium salinarium... [more]

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Properties
Property NameValue
Genbank descriptionC31705G09EF StrClemenN Citrus clementina cDNA clone C31705G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923506 ID=FC923506; Name=FC923506; organism=Citrus clementina; type=EST; length=702bp
CAAGCCGGTGCGCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCT
CCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGACGTCGTCT
CCGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATG
GTTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGG
TCACTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTG
TTAAGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAG
ACCAACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGG
ATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACC
AGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTAC
GAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGC
TCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGC
AGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCAC
TACAGGTACTAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATGTT
TTGAGGGAAAGAAAACAAATATTTGGCCGGCTTGATGTTTTNCATGATGA
TC
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