FC923506

Overview
NameFC923506
Unique NameFC923506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.635e-62
Identity = 125/201 (62.19%), Postives = 143/201 (71.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVI+TEIDPICALQA M+G QV TL++VV  ADIFVTTTGNKDIIM   M KMK+ AIV NIGHFDNEIDM GL   PG+ +  +KPQ   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV            T L  EQA YI V  DGPYKP HYRY
Sbjct:  272 GARVIITEIDPICALQAAMDGYQVATLDEVVDKADIFVTTTGNKDIIMASDMAKMKHQAIVGNIGHFDNEIDMAGLAQIPGIVKDEVKPQVHTWKFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVEVDGPYKPDHYRY 469          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 124/201 (61.69%), Postives = 148/201 (73.63%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQALM+G  V+T+E  +  ADI +T+TGNKDII +DHMK MK+ AI+ NIGHFDNEIDM  LE   G  RI IKPQ D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  293 GARVQVTEIDPINALQALMDGFDVVTVEQAIGSADIVITSTGNKDIITLDHMKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62
Identity = 124/201 (61.69%), Postives = 148/201 (73.63%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTEIDPI ALQALM+G  V+T+E  +  ADI +T+TGNKDII +DHMK MK+ AI+ NIGHFDNEIDM  LE   G  RI IKPQ D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV            T+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  293 GARVQVTEIDPINALQALMDGFDVVTVEQAIGSADIVITSTGNKDIITLDHMKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.643e-62
Identity = 122/203 (60.10%), Postives = 146/203 (71.92%), Query Frame = 1
Query:    1 QAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            QAG RV+V+E+DPICALQA MEG +V+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI + GL     +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L K+QADYI V  +GPYK  HYRY
Sbjct:  275 QAGCRVMVSEVDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAGLRN---LKWTNIKPQVDEIEFPDKHR-IIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.758e-62
Identity = 122/203 (60.10%), Postives = 147/203 (72.41%), Query Frame = 1
Query:    1 QAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            QAGARV+V+E+DPICALQA MEG QV+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI +  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L K+QADYI V  +GP+K  HYRY
Sbjct:  273 QAGARVMVSEVDPICALQAAMEGYQVVTMEDAAPIADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKN---LKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_PELLD (Adenosylhomocysteinase OS=Pelodictyon luteolum (strain DSM 273) GN=ahcY PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.214e-62
Identity = 120/201 (59.70%), Postives = 144/201 (71.64%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVIVTEIDPICALQA MEG +V T++  V + +IFVTTTGNKD++ ++HMK+M + AIVCNIGHFDNEI +  L  Y G  ++ IKPQ D++ F E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      Y+  VY LPK LDE+V            T L+KEQA+YI V   GPYKP HYRY
Sbjct:  276 GARVIVTEIDPICALQAAMEGFEVTTMDKAVKEGNIFVTTTGNKDVVTLEHMKQMPDEAIVCNIGHFDNEIQVEPLNEYKGATKLNIKPQVDKYTF-EDGHCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NDYKVDVYRLPKALDEEVARLHLEQIGVKLTTLSKEQAEYIGVPVTGPYKPEHYRY 471          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_STRCO (Adenosylhomocysteinase OS=Streptomyces coelicolor GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.384e-61
Identity = 123/201 (61.19%), Postives = 143/201 (71.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVI+TEIDPICALQA M+G QV TL++VV  ADIFVTTTGNKDIIM   M KMK+ AIV NIGHFDNEIDM GL   PG+ +  +KPQ   W +P+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV            T L  EQADYI V  +GPYK  HYRY
Sbjct:  288 GARVIITEIDPICALQAAMDGFQVTTLDEVVDKADIFVTTTGNKDIIMAKDMAKMKHQAIVGNIGHFDNEIDMAGLAQTPGIVKDEVKPQVHTWTYPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDSLGVKLTTLRPEQADYIGVKVEGPYKADHYRY 485          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_STRAA (Adenosylhomocysteinase OS=Streptomyces argillaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.384e-61
Identity = 125/201 (62.19%), Postives = 141/201 (70.15%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVIVTEIDPICALQA M+G QV TL++VV  ADIF+TTTGNKDIIM   M +MK+ AIV NIGHFDNEIDM GL   PG+ +  IKPQ   W FP+    IIVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +   G Y   VY LPKHLDEKV            T L  EQA YI V  DGPYK  HYRY
Sbjct:  285 GARVIVTEIDPICALQAAMDGYQVTTLDEVVDKADIFITTTGNKDIIMAADMARMKHQAIVGNIGHFDNEIDMAGLAKVPGIVKDEIKPQVHTWTFPD-GKKIIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTK--PGDYPTGVYTLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVDVDGPYKSDHYRY 482          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_NOVAD (Adenosylhomocysteinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.384e-61
Identity = 122/203 (60.10%), Postives = 150/203 (73.89%), Query Frame = 1
Query:    1 QAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            Q GARV+VTEIDPICALQA MEG +V+T+E+ V   DIFVT TGN+D+I  +HMK MK  +IVCNIGHFD+EI +  L  Y   K   IKP TD   FP+    II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y+ +VYVLPKHLDEKV            T+L+K+QADYI VS +GP+KP HYRY
Sbjct:  272 QGGARVMVTEIDPICALQAAMEGYEVVTMEEAVQRCDIFVTATGNEDVITAEHMKAMKPMSIVCNIGHFDSEIQISALNNY---KWTEIKPGTDLVEFPD-GKQIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQIELFTKNA--EYKNEVYVLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY 468          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_ZYMMO (Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.084e-61
Identity = 122/201 (60.70%), Postives = 149/201 (74.13%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTE+DPICALQA MEG +V+TLE+    ADIFVT TGN DII +DHM+ MK +AIVCNIGHFD+EI    + +   +K   IKPQ D   FP+    IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   +T KY+K VY+LPKHLDEKV            ++LT++QADYI V  +GP+KP HYRY
Sbjct:  270 GARVLVTEVDPICALQAAMEGYEVVTLEEAAPRADIFVTCTGNADIITLDHMRAMKQHAIVCNIGHFDSEIQ---INSLANMKWTEIKPQVDLVKFPD-GKEIIVLAKGRLVNLGCATGHPSFVMSASFTNQVLAQIELF--CNTDKYQKDVYMLPKHLDEKVAALHLPKLGVHLSKLTQKQADYIGVPVNGPFKPDHYRY 464          
The following BLAST results are available for this feature:
BLAST of FC923506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_STRAZ1.635e-6262.19Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_MYCSS2.790e-6261.69Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSK2.790e-6261.69Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_BRAJA3.643e-6260.10Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_RHOPS4.758e-6260.10Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_PELLD6.214e-6259.70Adenosylhomocysteinase OS=Pelodictyon luteolum (st... [more]
SAHH_STRCO1.384e-6161.19Adenosylhomocysteinase OS=Streptomyces coelicolor ... [more]
SAHH_STRAA1.384e-6162.19Adenosylhomocysteinase OS=Streptomyces argillaceus... [more]
SAHH_NOVAD1.384e-6160.10Adenosylhomocysteinase OS=Novosphingobium aromatic... [more]
SAHH_ZYMMO3.084e-6160.70Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahc... [more]

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Properties
Property NameValue
Genbank descriptionC31705G09EF StrClemenN Citrus clementina cDNA clone C31705G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923506 ID=FC923506; Name=FC923506; organism=Citrus clementina; type=EST; length=702bp
CAAGCCGGTGCGCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCT
CCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGACGTCGTCT
CCGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATG
GTTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGG
TCACTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTG
TTAAGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAG
ACCAACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGG
ATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACC
AGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTAC
GAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGC
TCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGC
AGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCAC
TACAGGTACTAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATGTT
TTGAGGGAAAGAAAACAAATATTTGGCCGGCTTGATGTTTTNCATGATGA
TC
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