FC923506

Overview
NameFC923506
Unique NameFC923506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.084e-61
Identity = 124/201 (61.69%), Postives = 145/201 (72.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V V E+DPICALQA MEG  V+TL DVV D DIFVT TGN  +I  D++ KMK+ AIVCNIGHFDNEID+  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +  + +Y K+VYVLPKHLDE V            T+LTK+QADYI+VS +GPYKP  YRY
Sbjct:  278 GAIVKVAEVDPICALQAAMEGFSVVTLNDVVEDIDIFVTATGNYQVITNDNLIKMKDEAIVCNIGHFDNEIDVASLKDYPWE---NIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNK--SDEYSKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKDQADYINVSVEGPYKPEQYRY 472          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.084e-61
Identity = 125/201 (62.19%), Postives = 147/201 (73.13%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA+V VTE+DPICALQA M+G +V+T+E+    ADIFVT TGN ++I  DHMK MK+ AIVCNIGHFDNEID+  L+ Y   K   IKPQ D   FP+    I +LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   + GKYEK VYVLPKHLDEKV            TRL++EQA YI VS DGP+KP  YRY
Sbjct:  236 GAQVWVTEVDPICALQASMDGYKVVTMEEAAPVADIFVTATGNYNVITHDHMKAMKDEAIVCNIGHFDNEIDVASLKQY---KWDEIKPQVDHVEFPD-GKKITLLAEGRLVNLGCATGHPSFVMSNSFTNQVMAQMELY--NNPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVDGPFKPEWYRY 430          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_DESVV (Adenosylhomocysteinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.084e-61
Identity = 122/201 (60.70%), Postives = 143/201 (71.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTEIDPICALQA MEG +V T+E+ V   DIFVT TGN ++I   HM+ MK+ AIVCNIGHFDNEIDM  LE   G   + IKPQ D+W    +   IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V            TRL+K+QADYI VS +GP+KP HYRY
Sbjct:  283 GARVLVTEIDPICALQAAMEGYEVTTMEEAVRTGDIFVTATGNCNVITGAHMEAMKDEAIVCNIGHFDNEIDMHYLENTEGCVCLNIKPQVDKWTL-RSGRSIIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_DESVH (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.084e-61
Identity = 122/201 (60.70%), Postives = 143/201 (71.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTEIDPICALQA MEG +V T+E+ V   DIFVT TGN ++I   HM+ MK+ AIVCNIGHFDNEIDM  LE   G   + IKPQ D+W    +   IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V            TRL+K+QADYI VS +GP+KP HYRY
Sbjct:  283 GARVLVTEIDPICALQAAMEGYEVTTMEEAVRTGDIFVTATGNCNVITGAHMEAMKDEAIVCNIGHFDNEIDMHYLENTEGCVCLNIKPQVDKWTL-RSGRSIIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_STRGG (Adenosylhomocysteinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ahcY PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.261e-61
Identity = 123/201 (61.19%), Postives = 141/201 (70.15%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARVI+TEIDPICALQA M+G QV TL+DVV  ADIFVTTTGNKDIIM   M +MK+ AIV NIGHFDNEIDM GL    G+ +  +KPQ   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +     Y   VYVLPKHLDEKV            T L  EQA YI V  +GPYKP HYRY
Sbjct:  288 GARVIITEIDPICALQAAMDGYQVATLDDVVEQADIFVTTTGNKDIIMAKDMARMKHQAIVGNIGHFDNEIDMAGLAKIDGIVKDEVKPQVHTWTFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPE--DYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQAAYIGVEVEGPYKPDHYRY 485          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPT (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain TIE-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.974e-61
Identity = 122/203 (60.10%), Postives = 146/203 (71.92%), Query Frame = 1
Query:    1 QAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            QAG RV+V+E+DPICALQA MEG QV+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI    + T   +K   IKPQ D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL++ +  GKYEKKVYVLPK LDEKV            T L K+QADYI V  +GP+K  HYRY
Sbjct:  273 QAGCRVMVSEVDPICALQAAMEGYQVVTMEDAAPIADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQ---VATLKNMKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFQNQ--GKYEKKVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 469          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.974e-61
Identity = 120/203 (59.11%), Postives = 145/203 (71.43%), Query Frame = 1
Query:    1 QAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            QAG RV+V+E+DPICALQA MEG QV+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI +  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L K+QADYI V  +GP+K  HYRY
Sbjct:  273 QAGCRVMVSEVDPICALQAAMEGYQVVTMEDAAPLADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKN---LKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 8.974e-61
Identity = 123/202 (60.89%), Postives = 150/202 (74.26%), Query Frame = 1
Query:    4 AGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            AGARV VTE DPICALQA M+G +V+ LEDVVS ADIF+TTTGNKD+I +DHM++MK+ AIV NIGHFDNEI++  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +   G+YE KVY+LPKHLDEKV            T+L++EQA YI VS  GP+K  HYRY
Sbjct:  271 AGARVKVTEADPICALQAAMDGYEVVLLEDVVSSADIFITTTGNKDVIRIDHMREMKDMAIVGNIGHFDNEIEVAALR---NLKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTK--PGQYENKVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPA (Adenosylhomocysteinase OS=Rhodopseudomonas palustris GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 122/203 (60.10%), Postives = 146/203 (71.92%), Query Frame = 1
Query:    1 QAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            QAG RV+V+E+DPICALQA MEG QV+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI    + T   +K   IKPQ D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL++ +  GKYEKKVYVLPK LDEKV            T L K+QADYI V  +GP+K  HYRY
Sbjct:  273 QAGCRVMVSEVDPICALQAAMEGYQVVTMEDAAPIADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQ---VATLKNMKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFQNQ--GKYEKKVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 469          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.172e-60
Identity = 124/201 (61.69%), Postives = 144/201 (71.64%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V V E+DPICALQA MEG  V+TL+DVV D DIFVT TGN  +I   ++ KMK+ AIVCNIGHFDNEID+  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY K+VYVLPKHLDE V            T+LT+EQADYI+VS +GPYKP  YRY
Sbjct:  278 GAIVKVAEVDPICALQAAMEGFSVVTLDDVVEDIDIFVTATGNYQVITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWE---NIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--KYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY 472          
The following BLAST results are available for this feature:
BLAST of FC923506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_PROMP3.084e-6161.69Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_HALHL3.084e-6162.19Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_DESVV3.084e-6160.70Adenosylhomocysteinase OS=Desulfovibrio vulgaris s... [more]
SAHH_DESVH3.084e-6160.70Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_STRGG5.261e-6161.19Adenosylhomocysteinase OS=Streptomyces griseus sub... [more]
SAHH_RHOPT8.974e-6160.10Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHOP28.974e-6159.11Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHIE68.974e-6160.89Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_RHOPA1.172e-6060.10Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_PROM91.172e-6061.69Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionC31705G09EF StrClemenN Citrus clementina cDNA clone C31705G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923506 ID=FC923506; Name=FC923506; organism=Citrus clementina; type=EST; length=702bp
CAAGCCGGTGCGCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCT
CCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGACGTCGTCT
CCGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATG
GTTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGG
TCACTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTG
TTAAGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAG
ACCAACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGG
ATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACC
AGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTAC
GAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGC
TCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGC
AGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCAC
TACAGGTACTAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATGTT
TTGAGGGAAAGAAAACAAATATTTGGCCGGCTTGATGTTTTNCATGATGA
TC
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