FC923506

Overview
NameFC923506
Unique NameFC923506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.454e-60
Identity = 120/202 (59.41%), Postives = 143/202 (70.79%), Query Frame = 1
Query:    4 AGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            AG RV+V+E+DPICALQA MEG +V T+ED    ADIFVT TGNKD+I +DHM+ MK+ AIVCNIGHFDNEI + GL+    +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+ELW  +  GKYE +VY LPK LDEKV            T L  +QA YI V A GP+KP HYRY
Sbjct:  273 AGCRVMVSEVDPICALQAAMEGYEVTTMEDAAPRADIFVTATGNKDVITIDHMRSMKDRAIVCNIGHFDNEIQVAGLK---NLKWSNIKPQVDEIEFPDGHR-IILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELWTNQ--GKYENQVYTLPKTLDEKVAALHLEKIGVKLTTLRPDQAAYIGVQASGPFKPDHYRY 468          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_DESAD (Adenosylhomocysteinase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=ahcY PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.454e-60
Identity = 119/201 (59.20%), Postives = 143/201 (71.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTEIDPICALQA MEG +V T+ + V   D+FVT TGN  +I  +H+ KMK+ AI+CNIGHFDNEI+M  LE     K+I IKPQ D+WV  E+   +IVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ++L K     +YE KV +L K LDE+V              L+KEQADYISV  +GPYKP HYRY
Sbjct:  277 GARVLVTEIDPICALQAAMEGFEVCTMANAVERGDVFVTCTGNYHVITGEHISKMKDEAIICNIGHFDNEIEMGYLENSKTAKKIEIKPQVDKWVM-ESGKSVIVLAEGRLVNLGCATGHPSFVMSNSFTNQALAQIDLAK----NEYEPKVMILSKKLDEEVARLHLERLGVELDVLSKEQADYISVDVEGPYKPDHYRY 472          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.817e-60
Identity = 121/201 (60.20%), Postives = 144/201 (71.64%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V + E+DPICALQA MEG +V+ LEDVV D DIFVT TGN  +I  +H+ KMK+ AIVCNIGHFDNEID+  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  282 GATVCIAEVDPICALQAAMEGYRVVRLEDVVEDMDIFVTATGNYQVIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKEY---EWENIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGD--EYAKEVYVLPKHLDEMVARLHLGRIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.817e-60
Identity = 121/201 (60.20%), Postives = 145/201 (72.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V + E+DPICALQA MEG +V+ LEDVV   DIFVT TGN  +I  +H+ KMK+ AIVCNIGHFDNEID+  L++Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + S  +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  282 GATVCIAEVDPICALQAAMEGYRVVRLEDVVDQMDIFVTATGNYQVIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKSY---EWDNIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.817e-60
Identity = 118/202 (58.42%), Postives = 147/202 (72.77%), Query Frame = 1
Query:    4 AGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            AGARV VTE DPICALQA M+G +V+TL++ ++ ADI +T TGNKD++ +DHM+KMK+  I+ NIGHFDNEI +  L  +   K + IKPQ D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW   S  +YE KVYVLPKHLDEKV            T+L+ EQA YI V+ +GP+KP HYRY
Sbjct:  270 AGARVKVTEADPICALQAAMDGFEVVTLDEAIATADIIITATGNKDVVSLDHMRKMKDMVILGNIGHFDNEIQVAALRNF---KWVNIKPQVDLIEFPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTRGS--QYENKVYVLPKHLDEKVARLHLAKLGANLTKLSPEQAAYIGVTPEGPFKPDHYRY 465          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_AGRT5 (Adenosylhomocysteinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ahcY PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.817e-60
Identity = 122/202 (60.40%), Postives = 148/202 (73.27%), Query Frame = 1
Query:    4 AGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            AGARV VTEIDPICALQA M+G +V+ LEDVVS ADIF+TTTGNKD+I ++HM++MK+ AIV NIGHFDNEI +  L     +K   IKPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+ +   G+Y+ +VYVLPKHLDEKV            T L+  QADYI +S  GP+K  HYRY
Sbjct:  271 AGARVKVTEIDPICALQAAMDGFEVVRLEDVVSSADIFITTTGNKDVIRIEHMREMKDMAIVGNIGHFDNEIQVASLR---NLKWTNIKPQVDMIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTK--PGEYKNEVYVLPKHLDEKVARLHLEKLGVRLTELSDLQADYIGISKQGPFKAEHYRY 466          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.597e-60
Identity = 121/201 (60.20%), Postives = 144/201 (71.64%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V++ EIDPICALQA MEG +V+ L++VV D DIFVT+TGN  +I  +H+ +MK+ AIVCNIGHFDNEID+  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY  +VYVLPKHLDE V            T LTK+QADYISV  +GPYKP HYRY
Sbjct:  282 GATVMIAEIDPICALQAAMEGYRVVRLDEVVQDVDIFVTSTGNFQVIRHEHLIRMKDEAIVCNIGHFDNEIDVASLKDYSWE---NIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--KYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPIEGPYKPDHYRY 476          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.922e-60
Identity = 120/201 (59.70%), Postives = 146/201 (72.64%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V + E+DPICALQA MEG +V+ LEDVV + DIFVT TGN  +I  +H++KMK+ AIVCNIGHFDNEID+  L+   G +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  282 GATVCIAEVDPICALQAAMEGYRVVRLEDVVEEMDIFVTATGNYQVIRNEHLEKMKDEAIVCNIGHFDNEIDVASLK---GYEWDNIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_SPHAL (Adenosylhomocysteinase OS=Sphingopyxis alaskensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.922e-60
Identity = 117/201 (58.21%), Postives = 143/201 (71.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV+VTEIDPICALQA MEG +V+T+++ V  +DIFVT TGN D+I  +HM  MKN AIVCNIGHFD+EI +  L  Y   K   +KPQ D   FP+    II+L++GRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW      +Y+  VYVLPKHLDEKV            T+LT++QADYI V  +GP+KP HYRY
Sbjct:  278 GARVLVTEIDPICALQAAMEGFEVVTMDEAVKRSDIFVTATGNADVITAEHMAAMKNMAIVCNIGHFDSEIQIAALANY---KWTEVKPQVDLVEFPD-GKQIIILSKGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTRSE--QYQNDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY 472          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.922e-60
Identity = 117/208 (56.25%), Postives = 147/208 (70.67%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRIT---IKPQ----TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            G RV+VTEIDPI ALQA MEG +V T+E+   +  ++VTTTGNKDII+ +HMK+M N+AI+CNIGHFD EID+   E      + T   IKP      DR+ F +T   II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL++ +   KY  +VY+LPK LDE+V            T+LT+EQADYI V  +GPYKP HYRY
Sbjct:  241 GCRVLVTEIDPINALQAAMEGFEVTTMEEACKEGRLYVTTTGNKDIILGEHMKQMPNDAILCNIGHFDTEIDIAWAEQQVADGKATVSEIKPSDIGAVDRFTFNDTGRSIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQMELYQNRDNDKYGVQVYLLPKELDEEVARLHLEAIGVKLTKLTQEQADYIGVPVEGPYKPNHYRY 448          
The following BLAST results are available for this feature:
BLAST of FC923506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_METS44.454e-6059.41Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]
SAHH_DESAD4.454e-6059.20Adenosylhomocysteinase OS=Desulfovibrio salexigens... [more]
SAHH_SYNSC5.817e-6060.20Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SYNS35.817e-6060.20Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_MESSB5.817e-6058.42Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_AGRT55.817e-6060.40Adenosylhomocysteinase OS=Agrobacterium tumefacien... [more]
SAHH_PROM37.597e-6060.20Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_SYNPX9.922e-6059.70Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SPHAL9.922e-6058.21Adenosylhomocysteinase OS=Sphingopyxis alaskensis ... [more]
SAHH_RHOBA9.922e-6056.25Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]

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Properties
Property NameValue
Genbank descriptionC31705G09EF StrClemenN Citrus clementina cDNA clone C31705G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923506 ID=FC923506; Name=FC923506; organism=Citrus clementina; type=EST; length=702bp
CAAGCCGGTGCGCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCT
CCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGACGTCGTCT
CCGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATG
GTTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGG
TCACTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTG
TTAAGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAG
ACCAACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGG
ATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACC
AGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTAC
GAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGC
TCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGC
AGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCAC
TACAGGTACTAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATGTT
TTGAGGGAAAGAAAACAAATATTTGGCCGGCTTGATGTTTTNCATGATGA
TC
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