FC923506

Overview
NameFC923506
Unique NameFC923506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_RALME (Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.922e-60
Identity = 119/200 (59.50%), Postives = 140/200 (70.00%), Query Frame = 1
Query:   10 ARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            A+V VTEIDPICALQA MEG +V+T++      DIFVT TGN  +I  DHM KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E+ +GKY   VYVLPKHLDEKV            T LT++QA YI V  +GPYK  HYRY
Sbjct:  277 AQVWVTEIDPICALQAAMEGYRVVTMDYAAEHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEKYEWDE---IKPQVDHVKFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWAERDSGKYPVGVYVLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_PLAF7 (Adenosylhomocysteinase OS=Plasmodium falciparum (isolate 3D7) GN=PFE1050w PE=1 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 9.922e-60
Identity = 112/201 (55.72%), Postives = 138/201 (68.66%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV +TEIDPICA+QA+MEG  V+TL+++V   D F+T TGN D+I ++H+ KMKNNA+V NIGHFD+EI +  L  Y G+    +KPQ DR   P  N  IIVLA GRL+NLGCATGHP+FVMS SF NQ  AQL+LW+ K T KYE KVY+LPKHLDEKV            T L   Q  ++ V+  GP+K   YRY
Sbjct:  280 GARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPNGNK-IIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.922e-60
Identity = 118/203 (58.13%), Postives = 143/203 (70.44%), Query Frame = 1
Query:    1 QAGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            QAG RV+V+EIDPICALQA MEG +V+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI +  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L  +QA YI V  +GP+K  HYRY
Sbjct:  275 QAGCRVLVSEIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQVASLK---NLKWTNIKPQVDEITFPD-GKRMILLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELYANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRPDQAAYIGVKQEGPFKSDHYRY 473          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.296e-59
Identity = 120/201 (59.70%), Postives = 143/201 (71.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V + E+DPICALQA MEG +V+ L+DVV   DIFVT TGN  +I  +H+ KMK+ AIVCNIGHFDNEID+  L+ Y   K   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  282 GATVCIAEVDPICALQAAMEGYRVVRLDDVVDQMDIFVTATGNYQVIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKDY---KWDNIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTK--ANEYGKEVYVLPKHLDEMVARLHLSKIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_POLNS (Adenosylhomocysteinase OS=Polynucleobacter necessarius (strain STIR1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.296e-59
Identity = 119/204 (58.33%), Postives = 139/204 (68.14%), Query Frame = 1
Query:   10 ARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNS----GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            A+V VTE+DPICALQA MEG +V+T++     ADIFV+ TGN  +I  DHM KMK+ AIVCNIGHFDNEID+ G+E Y   K   IKPQ D  +FP  N      II+LA+GRL+NLGC TGHPS+VMS SF NQVIAQ+ELW    T KY   VY LPKHLDEKV            T LT +QA YI V+ +GPYK  HYRY
Sbjct:  281 AQVWVTEVDPICALQAAMEGYRVVTMDYAADKADIFVSATGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDVAGIEKY---KWEEIKPQVDHVIFPAANGMPEKRIIILAKGRLVNLGCGTGHPSYVMSSSFANQVIAQIELWNAVGTNKYPVGVYTLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVTKEGPYKADHYRY 481          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.296e-59
Identity = 120/202 (59.41%), Postives = 146/202 (72.28%), Query Frame = 1
Query:    4 AGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            AG RV+V+EIDPICALQA MEG +V+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI + GL+    +K   IKPQ D   F + +  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW   + GKYE++VY LPK LDEKV            ++L  +QA YI VS  GP+KP HYRY
Sbjct:  273 AGCRVLVSEIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQVAGLK---NLKWQNIKPQVDEIEFADGHR-IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELW--TNPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY 468          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.296e-59
Identity = 120/202 (59.41%), Postives = 146/202 (72.28%), Query Frame = 1
Query:    4 AGARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            AG RV+V+EIDPICALQA MEG +V+T+ED    ADIFVT TGNKDII ++HM+ MK+ AIVCNIGHFDNEI + GL+    +K   IKPQ D   F + +  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW   + GKYE++VY LPK LDEKV            ++L  +QA YI VS  GP+KP HYRY
Sbjct:  273 AGCRVLVSEIDPICALQAAMEGYEVVTMEDAAPRADIFVTATGNKDIITIEHMRAMKDRAIVCNIGHFDNEIQVAGLK---NLKWQNIKPQVDEIEFADGHR-IILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELW--TNPGKYERQVYTLPKALDEKVAALHLEKIGVKLSKLRPDQAAYIGVSQTGPFKPEHYRY 468          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.692e-59
Identity = 120/201 (59.70%), Postives = 145/201 (72.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V + E+DPICALQA MEG +V+ LEDVV D DIFVT TGN  +I  +H+ KMK+ AIVCNIGHFDNEID+  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GP+KP HYRY
Sbjct:  282 GATVCIAEVDPICALQAAMEGYRVVRLEDVVEDMDIFVTATGNYQVIRNEHLLKMKDEAIVCNIGHFDNEIDVASLKDY---EWENIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPFKPDHYRY 476          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.692e-59
Identity = 124/201 (61.69%), Postives = 143/201 (71.14%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GA V V EIDPICALQA MEG  V+ LEDVV D DIFVT TGN  +I  +++ KMK+ AIVCNIGHFDNEID+  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V            T+LTKEQADYISVS +GPYK   YRY
Sbjct:  278 GAIVKVAEIDPICALQAAMEGYSVVRLEDVVEDIDIFVTATGNYQVITHENLVKMKDEAIVCNIGHFDNEIDVASLKNY---QWENIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYISVSVEGPYKSEFYRY 472          
BLAST of FC923506 vs. ExPASy Swiss-Prot
Match: SAHH_PLACH (Adenosylhomocysteinase OS=Plasmodium chabaudi GN=PC000295.02.0 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.692e-59
Identity = 115/202 (56.93%), Postives = 144/202 (71.29%), Query Frame = 1
Query:    7 GARVIVTEIDPICALQALMEGLQVLTLEDVVSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 609
            GARV VTE+DPICA+QA+MEG  V+TLE++V   D FVT TGN DII ++H+ KMKNNA+V NIGHFD+EI +  L ++ G++   +KPQ DR   P  N  IIVLA+GRL+NL CATGHP+FVMS SF NQV AQLELW+ ++TGKYEK K Y+LPK LDEKV            T L   Q +++ VS +GP+K   YRY
Sbjct:  279 GARVYVTEVDPICAIQAVMEGFNVVTLEEIVEKGDFFVTCTGNVDIIKLEHLLKMKNNAVVGNIGHFDDEIQIADLFSHEGIEIENVKPQVDRVTLPNGNK-IIVLAQGRLLNLACATGHPAFVMSFSFCNQVFAQLELWENRNTGKYEKNKSYILPKELDEKVAYYHLKKLNATLTELDDNQCEFLGVSKNGPFKSEAYRY 479          
The following BLAST results are available for this feature:
BLAST of FC923506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 245
Match NameE-valueIdentityDescription
SAHH_RALME9.922e-6059.50Adenosylhomocysteinase OS=Ralstonia metallidurans ... [more]
SAHH_PLAF79.922e-6055.72Adenosylhomocysteinase OS=Plasmodium falciparum (i... [more]
SAHH_BRASB9.922e-6058.13Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_SYNS91.296e-5959.70Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_POLNS1.296e-5958.33Adenosylhomocysteinase OS=Polynucleobacter necessa... [more]
SAHH_METEP1.296e-5959.41Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC41.296e-5959.41Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_SYNPW1.692e-5959.70Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PROM01.692e-5961.69Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PLACH1.692e-5956.93Adenosylhomocysteinase OS=Plasmodium chabaudi GN=P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31705G09EF StrClemenN Citrus clementina cDNA clone C31705G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923506 ID=FC923506; Name=FC923506; organism=Citrus clementina; type=EST; length=702bp
CAAGCCGGTGCGCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCT
CCAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGACGTCGTCT
CCGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATG
GTTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGG
TCACTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTG
TTAAGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAG
ACCAACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGG
ATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACC
AGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTAC
GAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGC
TCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGC
AGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCAC
TACAGGTACTAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATGTT
TTGAGGGAAAGAAAACAAATATTTGGCCGGCTTGATGTTTTNCATGATGA
TC
back to top