FC923513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923513 vs. ExPASy Swiss-Prot
Match: IF2B_DICDI (Eukaryotic translation initiation factor 2 subunit 2 OS=Dictyostelium discoideum GN=eif2s2 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.711e-28 Identity = 56/107 (52.34%), Postives = 84/107 (78.50%), Query Frame = 3 Query: 420 ADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDG-QRLVVKGRF 737 +DG + PW G+DRDY+Y EL R++++L+ NNP+L D++RT M+PPQV+REGTKKT++ NF ++C T++R+ +HV ++ AELGT+GS+DG QRLV++GRF Sbjct: 144 SDGDTFVQGTIPWAGTDRDYKYSELTYRIYHLLQANNPDLISDQKRT-MKPPQVMREGTKKTIWANFAEICGTLNRKVEHVYNYVFAELGTNGSIDGNQRLVIRGRF 249
BLAST of FC923513 vs. ExPASy Swiss-Prot
Match: IF2B_SCHPO (Probable eukaryotic translation initiation factor 2 subunit beta OS=Schizosaccharomyces pombe GN=tif212 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27 Identity = 86/229 (37.55%), Postives = 109/229 (47.60%), Query Frame = 3 Query: 75 PQAVSDGREDLSFDSRNSTMTDENQVDVKDEVAELAPFDPTXXXXXXXVVIQDPSDDSVDKLAEITETLSVSEGLESTFTGLXXXXXXP-------VESSLLNDEIGDAGDDLDGHVGEDDEADGSGGPRQRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDG-QRLVVKGRF 737 P+A S G D R S+ D + EV EL + + S S E TE ++ G E F+ + E L GDA DL + + + W SDRDY Y ELL R F +LR NNPELAG++R+ + PP V REG KKT+F N D+ K MHR DHV+ FL AELGTSGS+DG RL++KGRF Sbjct: 42 PEASSAGATDEDDSERKSSAKDLTTPVTEGEVDELKDMFSSMKK-------KKKSKKSSASAEEQTEDITTESG-ELDFSSMKKKKKKKKSADLSAFEKELEASSTGDATSDLSKQTFDSENMG-------EHAWLKSDRDYYYPELLNRFFTLLRTNNPELAGEKRKYTIVPPSVHREG-KKTIFANISDISKRMHRSLDHVIQFLFAELGTSGSVDGSSRLIIKGRF 254
BLAST of FC923513 vs. ExPASy Swiss-Prot
Match: IF2B_CAEEL (Eukaryotic translation initiation factor 2 subunit 2 OS=Caenorhabditis elegans GN=K04G2.1 PE=3 SV=4) HSP 1 Score: 102.834 bits (255), Expect = 1.972e-21 Identity = 46/94 (48.94%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 459 EGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQR-LVVKGRF 737 +G+ DY YEE L V+ ++++ NP+ AGD+++ ++ P+V R G+KKT F NF+++C+ M RQ HV+ FLLAELGT+GS+DG L+VKGR+ Sbjct: 81 KGAWPDYTYEEALTLVYQVMKDKNPDFAGDKKKFAIKLPEVARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTGSIDGSNCLIVKGRW 174
BLAST of FC923513 vs. ExPASy Swiss-Prot
Match: IF2B_YEAST (Eukaryotic translation initiation factor 2 subunit beta OS=Saccharomyces cerevisiae GN=SUI3 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21 Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 3 Query: 483 YEELLGRVFNILRENNPELAGDRRRTVMR--PPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMTFLLAELGTSGSLDGQ-RLVVKGRF 737 Y ELL R FNILR NNPELAGDR R PP LR+G KKT+F N D+ + +HR P+H++ +L AELGTSGS+DGQ RLV+KG+F Sbjct: 131 YSELLSRFFNILRTNNPELAGDRSGPKFRIPPPVCLRDG-KKTIFSNIQDIAEKLHRSPEHLIQYLFAELGTSGSVDGQKRLVIKGKF 217 The following BLAST results are available for this feature:
BLAST of FC923513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923513 ID=FC923513; Name=FC923513; organism=Citrus clementina; type=EST; length=738bpback to top |