FC923526

Overview
NameFC923526
Unique NameFC923526
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECOL6 (Divalent-cation tolerance protein cutA OS=Escherichia coli O6 GN=cutA PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTT-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECOL5 (Divalent-cation tolerance protein cutA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTT-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECOHS (Divalent-cation tolerance protein cutA OS=Escherichia coli O9:H4 (strain HS) GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECODH (Divalent-cation tolerance protein cutA OS=Escherichia coli (strain K12 / DH10B) GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECOBW (Divalent-cation tolerance protein cutA OS=Escherichia coli (strain K12 / BW2952) GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECO8A (Divalent-cation tolerance protein cutA OS=Escherichia coli O8 (strain IAI1) GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECO7I (Divalent-cation tolerance protein cutA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECO5E (Divalent-cation tolerance protein cutA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECO57 (Divalent-cation tolerance protein cutA OS=Escherichia coli O157:H7 GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
[Close]
BLAST of FC923526 vs. ExPASy Swiss-Prot
Match: CUTA_ECO55 (Divalent-cation tolerance protein cutA OS=Escherichia coli (strain 55989 / EAEC) GN=cutA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  112 EGNSNTVPSIVVYVTVPSKEAGKKLAESIVKAKLAACVNRVPGIESVYEWKGEIQTDAEELLIIKTRQSLLETLTEHVKANHEYDAPEVIALPITGGSQPYLEWLKSSTR 441
            E +SNT  S+VV  T P +   + LA  ++  KLAAC   +PG  S+Y W+G+++ + E  +I+KT  S  + L E +K++H Y  PE++ LP+T G   YL WL +S R
Sbjct:    4 EKSSNTA-SVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR 112
The following BLAST results are available for this feature:
BLAST of FC923526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CUTA_ECOL63.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECOL53.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECOHS3.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECODH3.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECOBW3.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECO8A3.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECO7I3.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECO5E3.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECO573.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]
CUTA_ECO553.290e-1840.00Divalent-cation tolerance protein cutA OS=Escheric... [more]

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Properties
Property NameValue
Genbank descriptionC31706A09EF StrClemenN Citrus clementina cDNA clone C31706A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923526 ID=FC923526; Name=FC923526; organism=Citrus clementina; type=EST; length=618bp
GGTCCCACTCTCTCTTCTTCCCTCAAAACGGGTTCCGCTCCTTCTCTCCC
GTTCTTCGGATCAAAGTTTAGTAACCAAGCTCGCGCGAAGAGTAGTAACA
CGATCAAAATGGAAGGCAACAGCAACACTGTACCAAGTATTGTAGTTTAT
GTCACCGTTCCTAGCAAAGAAGCAGGAAAGAAACTGGCTGAAAGCATAGT
GAAAGCAAAACTTGCAGCATGTGTGAATCGAGTGCCAGGTATTGAATCTG
TTTACGAGTGGAAGGGAGAGATCCAGACAGATGCTGAAGAACTTCTTATT
ATAAAGACTAGGCAATCCCTTTTGGAAACTCTGACAGAGCATGTCAAGGC
AAATCATGAATATGATGCGCCAGAAGTAATTGCCTTGCCCATCACTGGTG
GCAGCCAGCCATACCTAGAGTGGCTAAAAAGCAGTACAAGGGACTGACTC
CCGCGGATGTAGTGTGATGTAGTGTGTGGACGCTGTAACTGATAAGCTCC
TTTTGTTGTTGGGTTGAGTGTGCAGATGGTACTACTACTTGAATAAAGTT
TGTATATTTTATAATCGAACTGGAACATATCGTGATGAATTCTATGTTGG
CAAAACTTGTGAGATGAT
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