FC923608

Overview
NameFC923608
Unique NameFC923608
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.767e-54
Identity = 104/220 (47.27%), Postives = 138/220 (62.73%), Query Frame = 3
Query:   93 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDXVLANLD 731
            L   +Y  +CPKA  IV++ +  A +++ R+ ASLLRLHFHDCFV GCD S+LLD +   I EK + PN NSARGF ++++IK  LE+ CP  VSCADILA+AARDS V+ GGPSW+V LG               IP P +    +++ F  QGL L ++V+L+G HT+G +RCTSFR  +YN       D  +   +A  L+QRCPR G D  L  LD
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLD 252          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.767e-54
Identity = 107/247 (43.32%), Postives = 156/247 (63.16%), Query Frame = 3
Query:   15 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN-FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDXVLANLD 731
            MA+ S    + +  F+ ++   +N+QLS+ +Y +TCP   +IVR  +  A++N+ R+G SL+RLHFHDCFV+GCDGS+LLD+     + EK A+PN NS RGF+VVD IK  +E ACP VVSC DILA+A+  SV + GGPSW V LG               +P P  NL+ L   F+  GL++ ++VAL+G HT G+A+C +F   ++N SN       ++T++  +LQQ CP+ G+   + NLD
Sbjct:    1 MASFSPLLAMALAIFIFSS--HSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQGGSGFTVTNLD 245          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.308e-54
Identity = 110/220 (50.00%), Postives = 137/220 (62.27%), Query Frame = 3
Query:   93 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIY-------NDSNIDTSFARSLQQRCPRRGNDXVLANLD 731
            L    Y+++CP+A SIV + +   +  + R+ ASLLRLHFHDCFVNGCD SVLLDDT   +GEKTA PN NS RGF V+D IK+++E  CP  VSCADILA+AARDSVVV GGP W+V +G               +P P S +S LIS+F   GLS  +MVAL+GGHT+GKARCTSF   +         +   +  F  SLQQ C   G    +  LD
Sbjct:   50 LDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLD 269          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.308e-54
Identity = 113/240 (47.08%), Postives = 155/240 (64.58%), Query Frame = 3
Query:   15 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIY-NDSNIDTSFARSLQQRCPRRGNDXVLANLD 731
            M + S   L++++   TA    A+ QLS+ +Y ++CP+AL  +++G+ AA+ ++ R+GASLLRLHFHDCF  GCD SVLL        E+ A PN  S RGF V+D IK  LE  C + VSCADIL +AARDSVV  GGPSW V LG               +P P+S+ S L ++F  + L+  +MVAL+G HT+GKA+C++FR  IY  D+NI+T+FA SL+  CP+ G +  LANLD
Sbjct:    3 MGSASCISLVVLVALATA----ASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLLTGM-----EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYGGDTNINTAFATSLKANCPQSGGNTNLANLD 231          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.308e-54
Identity = 113/243 (46.50%), Postives = 160/243 (65.84%), Query Frame = 3
Query:   15 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQ-GLSLKNMVALAGGHTVGKARCTSFRGHIY-NDSNIDTSFARSLQQRCPRR--GNDXVLANLD 731
            MA++SY  LL+++  VTA    A++QLS  +Y ++CP+AL+ +++G++AA+ ++ R+GASLLRLHFHDCFV GCD SVLL        E+ A+PN  S RGF V+D IK  +E  C + VSCADIL +AARDSVV  GGPSW V LG               +P   S+ + L ++F  + GL+  +MVAL+G HT+G+A+C++FR  IY  D+NI+ ++A SL+  CP+     D  LANLD
Sbjct:    1 MASSSYTSLLVLVALVTA----ASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGGDTNINAAYAASLRANCPQTVGSGDGSLANLD 234          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.954e-53
Identity = 104/222 (46.85%), Postives = 141/222 (63.51%), Query Frame = 3
Query:   87 SQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDXVLANLD 731
            S L   +Y+ +CP+A  IV   +  AI  E R+ ASLLRLHFHDCFV GCD S+LLDD+A    EK A PN NS RGF V+D+IKA LE+ACP+ VSCADILA+AAR S ++ GGPSW++ LG               IP P S +  L++ F  +GL+ +++V+L+GGHT+G ARCT+F+  +YN       D  ++ S+   L+  CP  G D  ++ LD
Sbjct:   43 SNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLD 264          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.552e-53
Identity = 108/240 (45.00%), Postives = 152/240 (63.33%), Query Frame = 3
Query:   36 FLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLS-LKNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDXVLANLD 731
            FLLL++      +  +++QLS ++Y  TCP+   I    I+ A++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A  N NSARGF+V+D++KA +EKACP+ VSCAD+LAIAA++SVV+ GGPSW+V  G               +P P   L+ L   F   GL    ++VAL+GGHT GK +C      +YN SN       +D S+  +L+++CPR GN  VL + D
Sbjct:   10 FLLLLIQ-----VSLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFD 244          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.353e-53
Identity = 107/246 (43.50%), Postives = 157/246 (63.82%), Query Frame = 3
Query:   18 AATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDXVLANLD 731
            ++TS+ ++L+ L  +      +++QL+  +Y ++CP   +IVR  II  ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F+ EK A+ N NSARGF  VD+IKA +E+ACPR VSCAD+L IAA+ SV + GGPSW+V LG               +P P   L  L  +F+  GL    ++VAL+GGHT GK +C      +YN SN       ++T++ ++L+Q+CP  GN  VL + D
Sbjct:    5 SSTSFTWILITLGCLAFYASLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFD 250          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 206.068 bits (523), Expect = 1.654e-52
Identity = 104/225 (46.22%), Postives = 145/225 (64.44%), Query Frame = 3
Query:   81 ANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDXVLANLD 731
            +++QL+  +Y +TCP   +IVR  I+  ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A PN NSARGF V+D++KA +E ACPR VSCADIL IAA+ +V + GGPSW+V LG               +P P   L  L +SF   GL    ++VAL+GGHT GK +C      +YN SN       ++T++ ++L+ +CPR GN  VL + D
Sbjct:   27 SSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFD 251          
BLAST of FC923608 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.654e-52
Identity = 110/240 (45.83%), Postives = 149/240 (62.08%), Query Frame = 3
Query:   36 FLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDXVLANLD 731
            FLLL+L      +  +++QLS ++Y  TCP+   I    I  A++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A  N  SARGF+V+D +KA +EKACP+ VSCAD+LAIAA+ SVV+ GGPSWKV  G               +P P+S L  L   F   GL    ++VAL+GGHT GK +C      +YN SN       +D S+  +L+++CPR GN  VL + D
Sbjct:   12 FLLLLLN-----VSLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPRNGNLSVLVDFD 246          
The following BLAST results are available for this feature:
BLAST of FC923608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER72_ARATH1.767e-5447.27Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER15_IPOBA1.767e-5443.32Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER40_ARATH2.308e-5450.00Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER1_WHEAT2.308e-5447.08Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER1_HORVU2.308e-5446.50Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER9_ARATH1.954e-5346.85Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER37_ARATH2.552e-5345.00Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER1B_ARMRU4.353e-5343.50Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER32_ARATH1.654e-5246.22Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER2_ARMRU1.654e-5245.83Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC31707A07EF StrClemenN Citrus clementina cDNA clone C31707A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923608 ID=FC923608; Name=FC923608; organism=Citrus clementina; type=EST; length=738bp
GAGAAGTGCTAGATATGGCAGCAACAAGTTACTACTTTCTCCTTCTTATA
CTTACTTTTGTCACTGCAACTCTTGATCAAGCCAACTCCCAACTCTCAAC
AAACTACTACAAATCCACATGCCCAAAAGCATTGTCTATTGTTCGGGCAG
GGATTATAGCTGCTATAAAAAATGAAACACGCGTAGGGGCGTCTTTACTT
CGACTTCATTTCCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTACT
GTTGGATGATACGGCCAATTTCATAGGAGAGAAAACAGCAGTTCCTAACA
ATAACTCGGCCAGAGGGTTCAACGTGGTGGATCAGATTAAAGCTAATCTG
GAGAAAGCATGCCCCCGTGTTGTTTCGTGTGCAGATATTCTTGCCATTGC
CGCACGCGATTCAGTTGTTGTTTTCGGAGGTCCTTCATGGAAAGTTAGAT
TGGGAAGAAGAGATTCTACCACTGCTAGCAGGGCAGCGGCAAATACCTCC
ATCCCTCCACCCACTTCTAATTTGAGTGCTCTCATATCAAGCTTCTCGGC
ACAGGGTCTCTCATTAAAGAACATGGTGGCTCTTGCTGGTGGACATACGG
TAGGCAAGGCAAGGTGCACATCATTTCGAGGACACATTTACAACGATTCC
AATATTGACACCAGCTTCGCCAGGTCCTTGCAGCAGAGATGCCCAAGAAG
AGGAAATGACNATGTTCTGGCAAACCTTGACCGTCAAA
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