FC923647

Overview
NameFC923647
Unique NameFC923647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.791e-27
Identity = 70/199 (35.18%), Postives = 106/199 (53.27%), Query Frame = 2
Query:   59 YFELNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLL-KVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            + +LNNG K P    G++        +++  A+ Q GYRHID A  Y NE + G  + K  E+   KRED+W TSKL       +    ++D +++   + Y+DL+L+H P                  D   +WKA+E   + GK RAIGVSNF    +Q+LL    ++ P VNQ+E HP   Q+K+ ++C+SKGI +
Sbjct:    5 FVKLNNGLKCPQFAYGSYMVNRTKCFDSVYAAL-QCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKLNDLS-GYKSTLSSIDASVKACGLGYIDLFLLHSP----------------YGDRIESWKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQIELHPFCSQQKVVDYCESKGIQL 185          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.658e-25
Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            LN+G  +P +G G ++        A+  A+ + GYRHID A  YGNE+ +G  +        I R+DL+IT+KLW   H  ++   A+  +L  L +D VDLYLVHWP      ++               W+ M  L  +G  R+IGVSN  V  L+ ++    V PAVNQ+E HP + Q ++ ++  +  + +
Sbjct:    8 LNDGNSIPQLGYGVFKVPPADTQRAVEEAL-EVGYRHIDTAAIYGNEEGVGAAIAA----SGIARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYV-------------HAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKI 184          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y2161_MYCVP (Uncharacterized oxidoreductase Mvan_2161 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2161 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23
Identity = 66/193 (34.20%), Postives = 102/193 (52.85%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+   MP IGLG  +       +++  A+ +AGYR ID A  YGNE  +G  + K      + R +L++T+KL   D   +    A+  +L+ L +DYVDLYL+HWP  ++  ++              +W  +  L + G  R+IGVSNF  + L D++ ++  TPAVNQ+E HP  +Q +L       GI
Sbjct:   12 LNDDNTMPVIGLGVGELSDAEAEQSVLAAL-EAGYRLIDTAAAYGNEAAVGRAIAK----SGVPRGELFVTTKLATDDLGFQSSQDALRASLERLGLDYVDLYLIHWPAGSQGTYVD-------------SWGGLMKLKELGLTRSIGVSNFHAQHLDDIIGLSFFTPAVNQIELHPLLNQAELRAVNAEHGI 186          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  +P +GLG  +        ++A A+ +AGYR ID A  YGNE  +G  +        I RE++++T+KL   D        A   +L+ L +DYVDLYL+HWP      +I              +W  +      G AR+IGV NF+ + L +++ ++  TPA+NQ+E HP  +Q +L E     GI
Sbjct:   16 LNDGHSIPVLGLGVGELSEAEAERSVAAAL-EAGYRLIDTAAVYGNEAAVGRAVNA----SGIPREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWPAGDHGKYID-------------SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGI 190          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  +P +GLG  +        ++A A+ +AGYR ID A  YGNE  +G  +        I RE++++T+KL   D        A   +L+ L +DYVDLYL+HWP      +I              +W  +      G AR+IGV NF+ + L +++ ++  TPA+NQ+E HP  +Q +L E     GI
Sbjct:   16 LNDGHSIPVLGLGVGELSEAEAERSVAAAL-EAGYRLIDTAAVYGNEAAVGRAVNA----SGIPREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWPAGDHGKYID-------------SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGI 190          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+G  +P +GLG  +        ++A A+ +AGYR ID A  YGNE  +G  +        I RE++++T+KL   D        A   +L+ L +DYVDLYL+HWP      +I              +W  +      G AR+IGV NF+ + L +++ ++  TPA+NQ+E HP  +Q +L E     GI
Sbjct:   16 LNDGHSIPVLGLGVGELSESEAERSVAAAL-EAGYRLIDTAAVYGNEAAVGRAVNA----SGIPREEIYVTTKLAVADQGFGTSQDAARASLERLGLDYVDLYLIHWPAGDHGKYID-------------SWGGLMKAKQDGVARSIGVCNFNAEHLSNIIDLSFFTPAINQIELHPLLNQAELREVNAGYGI 190          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y4205_MYCGI (Uncharacterized oxidoreductase Mflv_4205 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_4205 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 67/193 (34.72%), Postives = 101/193 (52.33%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHEFCKSKGI 646
            LN+   MP IGLG  +       +A+  A+ +AGYR ID A  YGNE  +G   + +   GV  R++L++T+KL   D   +    A+  +L+ L +DYVDLYL+HWPV  +   +              +W  +    + G  R+IGV+NF    L D++ ++  TPAVNQ+E HP  +Q +L       GI
Sbjct:   12 LNDDNTMPVIGLGVGELSDAETEQAVTAAL-EAGYRLIDTAAAYGNEAAVG---RAIAASGV-PRDELFVTTKLATEDAGFQSSQDALRASLERLGLDYVDLYLIHWPVSQQGKHVD-------------SWGGLMKSKEVGLTRSIGVANFHGHHLDDIISLSFFTPAVNQIELHPLLNQAELRAVNAEHGI 186          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y2999_MYCTA (Uncharacterized oxidoreductase MRA_2999 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2999 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 66/186 (35.48%), Postives = 99/186 (53.23%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHE 625
            LN+   MP +GLG  +        A++ A+ + G R ID AY YGNE  +G   + +   GV  RE+L++T+KL   D       +A   +L  L +DYVDLYL+HWP      ++               W  M      G AR+IGVSNF+ + +++L+ +  VTPAVNQ+E HP  +Q++L +
Sbjct:   15 LNDEHTMPVLGLGVAELSDDETERAVSAAL-EIGCRLIDTAYAYGNEAAVG---RAIAASGVA-REELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAPPVGKYVD-------------AWGGMIQSRGEGHARSIGVSNFTAENIENLIDLTFVTPAVNQIELHPLLNQDELRK 182          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: Y2971_MYCTU (Uncharacterized oxidoreductase Rv2971/MT3049 OS=Mycobacterium tuberculosis GN=Rv2971 PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 66/186 (35.48%), Postives = 99/186 (53.23%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQHGVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLWCCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDLLKVARVTPAVNQVECHPGWHQEKLHE 625
            LN+   MP +GLG  +        A++ A+ + G R ID AY YGNE  +G   + +   GV  RE+L++T+KL   D       +A   +L  L +DYVDLYL+HWP      ++               W  M      G AR+IGVSNF+ + +++L+ +  VTPAVNQ+E HP  +Q++L +
Sbjct:   15 LNDEHTMPVLGLGVAELSDDETERAVSAAL-EIGCRLIDTAYAYGNEAAVG---RAIAASGVA-REELFVTTKLATPDQGFTRSQEACRASLDRLGLDYVDLYLIHWPAPPVGKYVD-------------AWGGMIQSRGEGHARSIGVSNFTAENIENLIDLTFVTPAVNQIELHPLLNQDELRK 182          
BLAST of FC923647 vs. ExPASy Swiss-Prot
Match: YKW2_SCHPO (Uncharacterized oxidoreductase P32A8.02 OS=Schizosaccharomyces pombe GN=SPAP32A8.02 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22
Identity = 72/201 (35.82%), Postives = 105/201 (52.24%), Query Frame = 2
Query:   68 LNNGAKMPPIGLGTWQAQH----GVVAEAIAIAIKQAGYRHIDCAYFYGNEKEIGTELKKLFEDGVIKREDLWITSKLW-CCDHAPEDVPKAMDRTLQDLQIDYVDLYLVHWPVRTKKGFISLNPEDLLQPDIPSTWKAMEALYDSGKARAIGVSNFSVKKLQDL-LKVARVTPAVNQVECHPGWHQEKLHEFCKSKGIHV 652
            L NG  +P IG G +  ++    G+V +A+      +GYRHID A  YGNE   G  +    E   +KR D+++TSKL  C D+       A+  +L  L   Y+DL+L+  P   KK  I             ++WKAME   DSG  R++GVSN+ VK LQ+L     +  P VNQ+E HP   Q+ + ++C+S  I +
Sbjct:   13 LTNGMVIPRIGFGAFMLKYNECYGLVTQAL-----DSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANCSDY--YSTRAAIRSSLHHLG-TYIDLFLIQSPAGGKKSRI-------------ASWKAMEEFVDSGDIRSVGVSNYGVKHLQELYASNPKFYPCVNQIELHPFLSQDDIVKYCQSHDIAI 192          
The following BLAST results are available for this feature:
BLAST of FC923647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
YER5_SCHPO8.791e-2735.18Uncharacterized oxidoreductase C2F3.05c OS=Schizos... [more]
DKGA_CORSC1.658e-2533.332,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
Y2161_MYCVP1.188e-2334.20Uncharacterized oxidoreductase Mvan_2161 OS=Mycoba... [more]
Y1984_MYCSK1.552e-2333.68Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS1.552e-2333.68Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
Y1918_MYCSJ1.552e-2333.68Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]
Y4205_MYCGI1.716e-2234.72Uncharacterized oxidoreductase Mflv_4205 OS=Mycoba... [more]
Y2999_MYCTA1.716e-2235.48Uncharacterized oxidoreductase MRA_2999 OS=Mycobac... [more]
Y2971_MYCTU1.716e-2235.48Uncharacterized oxidoreductase Rv2971/MT3049 OS=My... [more]
YKW2_SCHPO2.241e-2235.82Uncharacterized oxidoreductase P32A8.02 OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionC31707D12EF StrClemenN Citrus clementina cDNA clone C31707D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923647 ID=FC923647; Name=FC923647; organism=Citrus clementina; type=EST; length=721bp
GGGTCATTTCACACACATAACTTGGGAAATGGACCAAATAGCAAACGATA
ACGTTCAATACTTCGAGTTGAACAATGGAGCCAAAATGCCGCCTATCGGA
TTAGGCACATGGCAGGCTCAACATGGTGTTGTTGCCGAAGCCATTGCTAT
TGCCATCAAGCAGGCTGGATACCGTCATATCGATTGTGCTTATTTCTATG
GCAATGAAAAGGAGATTGGTACCGAGCTGAAGAAACTGTTTGAAGATGGA
GTGATCAAGCGTGAGGATCTATGGATCACCTCCAAGCTCTGGTGTTGTGA
TCATGCACCAGAAGATGTACCAAAGGCAATGGACAGAACTTTGCAGGACT
TGCAGATTGATTACGTGGATTTGTACCTCGTGCACTGGCCAGTGCGAACG
AAGAAGGGATTTATAAGCCTCAATCCCGAAGACCTTCTTCAACCAGATAT
ACCAAGCACATGGAAAGCAATGGAGGCACTTTATGATTCTGGCAAGGCTC
GAGCTATCGGAGTTAGTAATTTCTCTGTAAAGAAGCTTCAGGATTTATTG
AAAGTTGCCCGTGTTACTCCTGCTGTTAACCAAGTGGAATGCCACCCTGG
ATGGCACCAGGAAAAGCTACATGAATTTTGCAAATCCAAAGGGATTCACG
TATCTGGATACTCCCCAATGGGTTCCCCAGGCTCACCATGGTTCAAGAGC
GATGTGCTGAAGCATCCGGTT
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