FC923648

Overview
NameFC923648
Unique NameFC923648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.791e-46
Identity = 90/202 (44.55%), Postives = 126/202 (62.38%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVSRS-----LDEKHKRFNVFKQNVMHV--HQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS--IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            ++E +  +Y +W + H  + +     ++++ KRFN+FK N+  +  H  +  +  YKL L KF D+TN E+   Y G++ +  R     +         V    +P +VDWR+KG+V  +KDQG CGSCWAFST AAVEGIN I+T +L+SLSEQELVDC    NQGCNGGLM+ AF+FI K GG+ TE  YPY  + G C+
Sbjct:   41 TDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCN 242          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 9.720e-45
Identity = 92/200 (46.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKP----YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            SEE    LY  W++ H  S  ++ E+ +R+  F+ N+ ++ + N         ++L LN+FAD+TN E+  TY G + K  R     + +  ++     ++P SVDWR KG+V  +KDQG CGSCWAFS IAAVEGIN I+T  L+SLSEQELVDC    N+GCNGGLM+ AF+FI   GG+ TE  YPY   D  CDV+
Sbjct:   32 SEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRE---RKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVN 228          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.926e-41
Identity = 91/200 (45.50%), Postives = 123/200 (61.50%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            + + +L S E L  L+  W  +H+    ++DEK  RF +FK N+ ++ +TNK +  Y L LN+FAD++N EF   Y GS I    + Q    +  F+     ++P +VDWRKKG+VT V+ QG CGSCWAFS +A VEGIN I T KLV LSEQELVDC   S+ GC GG    A E++  K G+   +KYPY +  GTC
Sbjct:   33 YSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDA-TIEQSY--DEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSH-GCKGGYPPYALEYV-AKNGIHLRSKYPYKAKQGTC 227          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.992e-41
Identity = 83/176 (47.16%), Postives = 118/176 (67.05%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTN-KMDKP--YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            E  +RF VF  N+  V   N + D+   ++L +N+FAD+TN EF +T+ G+K+       G R    + +  V  +P SVDWR+KG+V  VK+QGQCGSCWAFS ++ VE IN ++T ++++LSEQELV+C  +  N GCNGGLM+ AF+FI K GG+ TE  YPY + DG CD++
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGER----YRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDIN 241          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.992e-41
Identity = 90/203 (44.33%), Postives = 127/203 (62.56%), Query Frame = 1
Query:  136 EKELE-SEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYD-GTCD 729
            E E+E +E  +  +YE+W   +  +   L EK +RF +FK N+  V + N + D+ +++ L +FAD+TN EF + Y   K++  +    T     ++Y +   +P  VDWR  G+V +VKDQG CGSCWAFS + AVEGIN I T +L+SLSEQELVDC     N GC+GG+M  AFEFI K GG+ T+  YPY + D G C+
Sbjct:   30 ETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTE---RYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCN 229          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.520e-41
Identity = 90/202 (44.55%), Postives = 120/202 (59.41%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTR--GNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            + + +L S E L  L++ W   H+ +  S+DEK  RF +F+ N+M++ +TNK +  Y L LN FAD++N EF   Y G   +    F G     N  F Y  VT+ P S+DWR KG+VT VK+QG CGSCWAFSTIA VEGIN I+T  L+ LSEQELVDC    + GC GG    + +++    GV T   YPY +    C
Sbjct:   33 YSQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAED---FTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYV-ANNGVHTSKVYPYQAKQYKC 229          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 8.515e-41
Identity = 98/214 (45.79%), Postives = 133/214 (62.15%), Query Frame = 1
Query:  115 VEGFDFHEKELESEEGLWDLYERWRSHHTVSRS--LDEKHKRFNVFKQNVMHVHQTN-KMDKP--YKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTA-VKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            V G +  E E  +   LW L    R     SR+  + E  +RF VF  N+  V   N + D+   ++L +N+FAD+TN EF +TY G+        +G R    + +  V ++P SVDWR KG+V A VK+QGQCGSCWAFS +AAVEGIN I+T +LVSLSEQELV+C  +  N GCNGG+M+ AF FI + GG+ TE  YPY + DG C+++
Sbjct:   48 VRGLERTEAEARAAYDLW-LARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAG----RGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLA 256          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.775e-38
Identity = 78/187 (41.71%), Postives = 113/187 (60.43%), Query Frame = 1
Query:  172 LYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            ++E W   H  V  S+ EK +R  +F+ N+  ++  N  +  Y+L L  FAD++ HE+     G+  +  R       +  +       +P SVDWR +G+VT VKDQG C SCWAFST+ AVEG+N I+T +LV+LSEQ+L++C    N GC GG +E A+EFI K GG+ T+  YPY + +G CD
Sbjct:   48 IFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNK-ENNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCD 233          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.319e-38
Identity = 85/190 (44.74%), Postives = 116/190 (61.05%), Query Frame = 1
Query:  172 LYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNK-MDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SN-QGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDV 732
            +YE W   +  S  SL E  +RF +FK+ +  + + N   ++ YK+ LN+FAD+T+ EF STY G     ++     R       G+V  +PS VDWR  G+V  +K QG+CG CWAFS IA VEGIN I+T  L+SLSEQEL+DC    N +GCNGG +   F+FI   GG+ TE  YPY + DG C++
Sbjct:   41 MYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKTKVSNRYEPRV--GQV--LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNL 226          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 3.028e-38
Identity = 84/200 (42.00%), Postives = 117/200 (58.50%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            + + +L S E L  L+  W   H  + +++DEK  RF +FK N+ ++ + NKM   Y L LN+F+D++N EF   Y GS  +    +     +  F+   +  +P SVDWR KG+VT VK QG C SCWAFST+A VEGIN I T  LV LSEQELVDC    + GCN G    + +++  + G+   AKYPY +   TC
Sbjct:   33 YSQDDLTSTERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSLPED---YTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDK-QSYGCNRGYQSTSLQYV-AQNGIHLRAKYPYIAKQQTC 227          
The following BLAST results are available for this feature:
BLAST of FC923648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
GCP1_ARATH8.791e-4644.55Germination-specific cysteine protease 1 OS=Arabid... [more]
ORYA_ORYSJ9.720e-4546.00Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
PAPA3_CARPA2.926e-4145.50Caricain OS=Carica papaya PE=1 SV=2[more]
ORYB_ORYSJ4.992e-4147.16Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CPR1_ARATH4.992e-4144.33Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
PAPA2_CARPA6.520e-4144.55Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP1_ORYSJ8.515e-4145.79Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CPR3_ARATH1.775e-3841.71Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ACTN_ACTDE2.319e-3844.74Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
PAPA4_CARPA3.028e-3842.00Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC31707E01EF StrClemenN Citrus clementina cDNA clone C31707E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923648 ID=FC923648; Name=FC923648; organism=Citrus clementina; type=EST; length=735bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGNACACTGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAACAACAGAGGCTAAGTACC
CTTACCNAAGCTATGATGGAACATGTGACGTTTCA
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