FC923648

Overview
NameFC923648
Unique NameFC923648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38
Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 1
Query:  157 EGLWD-----LYERWR-SHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            +G++D     ++E W   H  V  S+ EK +R  +F+ N+  +   N  +  Y+L LN+FAD++ HE+     G+  +  R       +  +       +P SVDWR +G+VT VKDQG C SCWAFST+ AVEG+N I+T +LV+LSEQ+L++C    N GC GG +E A+EFI   GG+ T+  YPY + +G C+
Sbjct:   45 QGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNK-ENNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCE 240          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38
Identity = 85/195 (43.59%), Postives = 115/195 (58.97%), Query Frame = 1
Query:  172 LYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNK-MDKPYKLKLNKFADMTNHEFASTY-----AGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SN-QGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDV 732
            +YE W   +  S  SL E  +RF +FK+ +  + + N   ++ YK+ LN+FAD+T+ EF STY       +K K    ++   G           +PS VDWR  G+V  +K QG+CG CWAFS IA VEGIN I+T  L+SLSEQEL+DC    N +GCNGG +   F+FI   GG+ TE  YPY + DG C+V
Sbjct:   41 MYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQ---------VLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNV 226          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.503e-37
Identity = 79/189 (41.80%), Postives = 114/189 (60.32%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            + +W+S H      +E+  R  ++++N+    +H  + +     + +++N F DMTN EF     G + + H+  +       F    +  IP SVDWR+KG VT VK+QGQCGSCWAFS    +EG   + T KL+SLSEQ LVDC H   NQGCNGGLM+ AF++IK+ GG+ +E  YPY + DG+C
Sbjct:   29 WHQWKSTHRRLYGTNEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGR------LFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.564e-37
Identity = 81/177 (45.76%), Postives = 107/177 (60.45%), Query Frame = 1
Query:  214 LDEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*S--NQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L+E+  R NVF  N+ ++ + NK     +  Y L +N+F+DMTN +F +   G K       +G R    F         + VDWR KG+VT VKDQGQCGSCWAFST   +EG + + T +LVSLSEQ+LVDC   S  NQGCNGG +E A  +++  GGV TE+ YPY + D TC
Sbjct:   34 LEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYK-------KGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTC 203          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.348e-37
Identity = 83/197 (42.13%), Postives = 114/197 (57.87%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            K+  SE    + +  W   H  S + +E   R+N+FK N+ +V Q N       L LN FAD+TN E+ +TY G+K     +  GT+    F     TS  +S DWR +G+VT VK+QGQCG CW+FST  + EG +     +LVSLSEQ L+DC    N GC+GGLM  AFE+I    G+ TE+ YPY + +G C+
Sbjct:   18 KQQFSELQYRNAFTDWMITHQKSYTSEEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDASSLI-GTQEEKVF----TTSSAASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCST-ENSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCE 208          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37
Identity = 79/189 (41.80%), Postives = 114/189 (60.32%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            + +W+S H      +E+  R  V+++N+    +H  + +     + +++N F DMTN EF     G + + H+  +       F    +  IP +VDWR+KG VT VK+QGQCGSCWAFS    +EG   + T KL+SLSEQ LVDC H   NQGCNGGLM+ AF++IK+ GG+ +E  YPY + DG+C
Sbjct:   29 WHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGR------LFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37
Identity = 84/195 (43.08%), Postives = 111/195 (56.92%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTN-KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDG-TC 726
            SE      +  W        S  E   R+++FK N+ +V   N K D    L LN FAD+TN E+  TY G+++  H  + G  G        + + P S+DWR K +VT +KDQGQCGSCW+FST  + EG + + T KLVSLSEQ LVDC     N GC+GGLM  AF++I K  G+ TE+ YPY +  G TC
Sbjct:   28 SESQYRTAFTEWTLKFNRQYSSSEFSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHS-YNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCSGPEENFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTC 221          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37
Identity = 80/198 (40.40%), Postives = 116/198 (58.59%), Query Frame = 1
Query:  148 ESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQTN-KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            E  + +   +E W + +  V +  DEK +RF +FK NV H+   N + +  Y L +N+F DMT  EF + Y G  +  +   +      +F    ++++P S+DWR  G+V  VK+Q  CGSCW+F+ IA VEGI  I T  LVSLSEQE++DC    + GC GG +  A++FI    GVTTE  YPY +Y GTC+ +
Sbjct:   28 EPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVV---SFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDCA--VSYGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNAN 220          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35
Identity = 85/199 (42.71%), Postives = 116/199 (58.29%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPS-SVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMT---NKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDG 720
            K+  SE    + +  W   H  + S +E + R+ +FK N+ +VHQ N       L LN FAD+TN E+ +TY G+       F G+   GT    K+ S P+ +VDWR +G+VT +K+QGQCG CW+FST  + EG + I +     LVSLSEQ L+DC     N GC GGLM LAFE+I    G+ TE+ YPY + DG
Sbjct:   18 KQQFSELQYRNAFTNWMQAHQRTYSSEEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTP------FDGSALIGT-EEEKIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDG 209          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35
Identity = 79/195 (40.51%), Postives = 114/195 (58.46%), Query Frame = 1
Query:  148 ESEEGLWDLYERWRSHH-TVSRSLDEKHKRFNVFKQNVMHVHQ-TNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            E  + +   +E W + +  V +  DEK  RF +FK NV H+    N+    Y L +N+F DMTN+EF + Y G  +  +   +      +F    ++S+P S+DWR  G+VT+VK+QG+CGSCWAF++IA VE I  I    LVSLSEQ+++DC    + GC GG +  A+ FI    GV + A YPY +  GTC
Sbjct:   28 EPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVV---SFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCA--VSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTC 217          
The following BLAST results are available for this feature:
BLAST of FC923648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CPR4_ARATH3.955e-3840.10Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
ACTN_ACTCH3.955e-3843.59Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATL1_MOUSE1.503e-3741.80Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CYSP1_HOMAM2.564e-3745.76Digestive cysteine proteinase 1 OS=Homarus america... [more]
CYSP5_DICDI3.348e-3742.13Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATL1_RAT5.711e-3741.80Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CYSP2_DICDI9.742e-3743.08Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
BROM1_ANACO9.742e-3740.40Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP4_DICDI4.093e-3542.71Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
ANAN_ANACO5.346e-3540.51Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC31707E01EF StrClemenN Citrus clementina cDNA clone C31707E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923648 ID=FC923648; Name=FC923648; organism=Citrus clementina; type=EST; length=735bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGNACACTGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAACAACAGAGGCTAAGTACC
CTTACCNAAGCTATGATGGAACATGTGACGTTTCA
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