FC923648

Overview
NameFC923648
Unique NameFC923648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 75/173 (43.35%), Postives = 99/173 (57.23%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            S  E HKRF +F +++  V  TN+    Y+L +N+FADM+  EF +T  G+         G       M     ++P + DWR+ G V+ VK+QG CGSCW FST  A+E      T K +SLSEQ+LVDC    +N GCNGGL   AFE+IK  GG+ TE  YPY   +G C
Sbjct:   72 SAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHR----MRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVNGIC 240          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33
Identity = 74/183 (40.44%), Postives = 107/183 (58.47%), Query Frame = 1
Query:  193 HHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNG----TFMYGKVTS-IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            ++ V +   EK  RF +FKQN+  ++  N ++     ++N  AD++++E      G K+    + +G + N     T + G  +  +P S DWR + SVT+VK Q +CGSCWAFS +A +E + HI  N  + LSEQ+LVDC    N GCNGGLM  AFE I + GG++ EA YPY   DG C
Sbjct:   50 YNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLS---LMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCDK-VNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVC 228          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33
Identity = 78/189 (41.27%), Postives = 109/189 (57.67%), Query Frame = 1
Query:  181 RWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYD-GTCD 729
            +W++ H     ++E+  R  V+++N+    +H  + ++    + + +N F DMTN EF     G + + H+  +       F       IP SVDWR+KG VT VK+QGQCGSCWAFS   A+EG     T KLVSLSEQ LVDC     N+GCNGGLM+ AF ++K  GG+ +E  YPY   D  TC+
Sbjct:   31 QWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGK------MFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCN 213          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33
Identity = 80/206 (38.83%), Postives = 114/206 (55.34%), Query Frame = 1
Query:  127 DFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH--------*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDG 720
            D  E ++ S E  + L+++      V  S++E + RF+VFK N++   +  KMD   +  + +F+D+T  EF   + G K      F+  +           ++P   DWR +G+VT VK+QG CGSCW+FST  A+EG + + T KLVSLSEQ+LVDC H          + GCNGGLM  AFE+  K GG+  E  YPY   DG
Sbjct:   35 DETEPKVLSSEDHFTLFKK--KFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVK----GGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDG 234          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32
Identity = 78/207 (37.68%), Postives = 111/207 (53.62%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIK--------HHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMT--NKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            K+  SE    + +  W   H    S +E + RFN+FK N+ ++++ N       L LN FAD+TN E+ +TY G+             ++F G + N             SVDWR KG+VT +K+QG+CG CW+FS   A EG  +I    + L S+SEQ+L+DC     N GC GGLM LAFE+I   GG+ TE+ YP+ +    C
Sbjct:   18 KQQLSELQYRNAFTNWMIAHQRHYSSEEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDASSLEMTPSEKVFGGVQAN-------------SVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGCEGGLMTLAFEYIINNGGIDTESSYPFTANTEKC 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.456e-32
Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 1
Query:  433 SIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            S+P S+DWR+KG +  VKDQG CGSCWAFS +AA+E IN I+T  L+SLSEQELVDC    N+GC+GGLM+ AFEF+ K GG+ TE  YPY   +G CD
Sbjct:   17 SLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCD 115          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.456e-32
Identity = 75/180 (41.67%), Postives = 104/180 (57.78%), Query Frame = 1
Query:  169 DLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPY 705
            D +  W   +  + +  E   R+  FK+N+ +VH  N       L LN+ AD++N E+   Y G++          R  G  +       P +VDWR+K +VT VKDQGQCGSC++FST  +VEG+  I T KLVSLSEQ ++DC     N+GCNGGLM  AFE+I K  G+ +E +YPY
Sbjct:   32 DSFIDWMRSNNKAYTHKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPY 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.456e-32
Identity = 76/186 (40.86%), Postives = 108/186 (58.06%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYD 717
            + +W++ H     ++E+  R  V+++N     +H  + ++    +++ +N F DMTN EF     G + + H+  +       F    +  +P SVDW KKG VT VK+QGQCGSCWAFS   A+EG     T KLVSLSEQ LVDC     NQGCNGGLM+ AF++IK  G + +E  YPY + D
Sbjct:   29 WHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGK------LFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATD 208          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32
Identity = 81/202 (40.10%), Postives = 110/202 (54.46%), Query Frame = 1
Query:  154 EEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKV------TSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            ++ L   + +W++ H      +E+  R  V+++N+    +H  + ++    + + +N F DMTN EF            R   G   N  F  GKV        +P SVDWRKKG VT VK+Q QCGSCWAFS   A+EG     T KLVSLSEQ LVDC     NQGCNGG M  AF+++K+ GG+ +E  YPY + D  C
Sbjct:   22 DQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEF------------RQMMGCFRNQKFRKGKVFREPLFLDLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEIC 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.243e-32
Identity = 77/185 (41.62%), Postives = 110/185 (59.46%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLK----LNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGK-VTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH---------*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGT 723
            S +E  +RF +FK N+  + + N +   +K      +NKFAD+++ EF + Y  +K     +F        ++  + + SIP++ DWR +G+VT VK+QGQCGSCW+FST   VEG + I  NKLVSLSEQ LVDC H           ++GCNGGL   A+ +I K GG+ TE+ YPY +  GT
Sbjct:   41 SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNK---EAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGT 222          
The following BLAST results are available for this feature:
BLAST of FC923648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CYSP2_MAIZE1.720e-3343.35Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATV_GVXN8.535e-3340.44Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATL1_CANFA8.535e-3341.27Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
A494_ARATH8.535e-3338.83Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP6_DICDI1.115e-3237.68Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CYSPL_SOLLC1.456e-3261.62Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSP3_DICDI1.456e-3241.67Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATL2_BOVIN1.456e-3240.86Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL2_HUMAN1.901e-3240.10Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CYSP1_DICDI3.243e-3241.62Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionC31707E01EF StrClemenN Citrus clementina cDNA clone C31707E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923648 ID=FC923648; Name=FC923648; organism=Citrus clementina; type=EST; length=735bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGNACACTGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAACAACAGAGGCTAAGTACC
CTTACCNAAGCTATGATGGAACATGTGACGTTTCA
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