FC923648

Overview
NameFC923648
Unique NameFC923648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.243e-32
Identity = 74/175 (42.29%), Postives = 102/175 (58.29%), Query Frame = 1
Query:  217 DEKHKRFNVFKQNVMHVHQTN----KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            +E+  R +VF   +  + + N    K +  Y LK+N F+D+T+ E  +T  G   + H +    +   T      T + + VDWR KG+VT VKDQGQCGSCWAFS +AA+EG + + T  LVSLSEQ LVDC     NQGCNGG    A+++I    G+ TE+ YPY + D  C
Sbjct:   35 EEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSAPT------TPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNC 203          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.236e-32
Identity = 76/177 (42.94%), Postives = 104/177 (58.76%), Query Frame = 1
Query:  217 DEKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSS--VDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            +E   R  +F+QN  ++ + NK     +  + L +NKF DMT  EF +   G+  +            +  Y K  + P +  VDWR KG+VT VKDQGQCGSCWAFST  ++EG + + T  L+SL+EQ+LVDC      QGCNGG M  AF++IK   G+ TEA YPY + DG+C
Sbjct:   35 EEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPV-------SVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSC 204          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.532e-32
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            S  E  +RF +F +++  V  TN+   PY+L +N+F+DM+  EF +T  G+         G       +     ++P + DWR+ G V+ VK+Q  CGSCW FST  A+E      T K +SLSEQ+LVDC    +N GCNGGL   AFE+IK  GG+ TE  YPY   +G C
Sbjct:   74 SAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNH-----LMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVC 241          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.232e-31
Identity = 76/186 (40.86%), Postives = 104/186 (55.91%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGS-VTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            ++ W   H    SL+E H R  VF  N   ++  N  +  +KL LN+F+DM+  E    Y  S+ ++    +G    GT  Y      P S+DWRKKG+ V+ VK+QG CGSCW FST  A+E    I T K++SL+EQ+LVDC  + +N GC GGL   AFE+I+   G+  E  YPY   D  C
Sbjct:   35 FKSWMVQHQKKYSLEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSEPQNCSATKGNYLRGTGPY------PPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDDHC 214          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.610e-31
Identity = 75/175 (42.86%), Postives = 103/175 (58.86%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKM----DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMY-GKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            E+  R  VF+QN   +   NK     +  +K+ +N+F DMTN EF +   G K       +G+RG    ++  +   + + VDWR K  VT VKDQ QCGSCWAFS   A+EG + +  ++LVSLSEQ+LVDC     N GC GG M  AF++IK  GG+ TE+ YPY + D +C
Sbjct:   36 EELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYK-------KGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSC 203          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.745e-31
Identity = 77/215 (35.81%), Postives = 111/215 (51.63%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTS--IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH--------*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            +V G D ++ EL +E       +R+   +   +  DE   R +VFK N+    +   +D   +  + KF+D+T  EF  TY G + K  R      G        + +  +P   DWR  G+V  VK+QG CGSCW+FS   A+EG +++ T KL  LSEQ+ VDC H          + GCNGGLM  AF +++K GG+ +E  YPY   DG C
Sbjct:   31 VVPGGDDNDLELNAESHFLSFVQRFGKSY---KDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLR-KSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDGKC 241          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.586e-31
Identity = 71/170 (41.76%), Postives = 97/170 (57.06%), Query Frame = 1
Query:  220 EKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            E  +RF +F +++  V  TN+   PY+L +N+FADM+  EF ++  G+         G             ++P + DWR+ G V+ VKDQG CGSCW FST  ++E      T K VSLSEQ+LVDC    +N GC+GGL   AFE+IK  GG+ TE  YPY   +G C
Sbjct:   78 EVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNH-----RMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGIC 242          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.586e-31
Identity = 73/189 (38.62%), Postives = 108/189 (57.14%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            + +W++ H     ++E+  R  V+++N+    +H  + ++    + + +N F DMT+ EF     G + +  R  +       F        P SVDWR+KG VT VK+QGQCGSCWAFS   A+EG     T KLVSLSEQ LVDC     N+GCNGGLM+ AF+++   GG+ +E  YPY + + +C
Sbjct:   29 WTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGK------VFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESC 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.683e-31
Identity = 79/206 (38.35%), Postives = 109/206 (52.91%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH--------*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDG-TC 726
            E ++ + E  + L++R      V  S +E   RF+VFK N+    +  K+D      + +F+D+T  EF   + G +      F+  +           ++P   DWR  G+VT VK+QG CGSCW+FS   A+EG N + T KLVSLSEQ+LVDC H          + GCNGGLM  AFE+  K GG+  E  YPY   DG TC
Sbjct:   41 EPQVLTSEDHFSLFKR--KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSG----FKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTC 240          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 134.42 bits (337), Expect = 6.116e-31
Identity = 75/186 (40.32%), Postives = 102/186 (54.84%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGS-VTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH-*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            ++ W S H  + S +E H R   F  N   ++  N  +  +K+ LN+F+DM+  E    Y  S+ ++    +     GT  Y      P SVDWRKKG+ V+ VK+QG CGSCW FST  A+E    I T K++SL+EQ+LVDC    +N GC GGL   AFE+I    G+  E  YPY   DG C
Sbjct:   35 FKSWMSKHRKTYSTEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPY------PPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYC 214          
The following BLAST results are available for this feature:
BLAST of FC923648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CRUST_PANBO3.243e-3242.29Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP2_HOMAM4.236e-3242.94Digestive cysteine proteinase 2 OS=Homarus america... [more]
ALEU_HORVU5.532e-3241.04Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATH_PIG1.232e-3140.86Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CYSP3_HOMAM1.610e-3142.86Digestive cysteine proteinase 3 OS=Homarus america... [more]
CYSP1_MAIZE2.745e-3135.81Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
ORYC_ORYSJ3.586e-3141.76Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATL1_CERAE3.586e-3138.62Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
RD19A_ARATH4.683e-3138.35Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CATH_HUMAN6.116e-3140.32Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionC31707E01EF StrClemenN Citrus clementina cDNA clone C31707E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923648 ID=FC923648; Name=FC923648; organism=Citrus clementina; type=EST; length=735bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGNACACTGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAACAACAGAGGCTAAGTACC
CTTACCNAAGCTATGATGGAACATGTGACGTTTCA
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