FC923648

Overview
NameFC923648
Unique NameFC923648
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 7.988e-31
Identity = 71/189 (37.57%), Postives = 108/189 (57.14%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            + +W++ H     ++E+  R  V+++N+    +H  +  +    + + +N F DMT+ EF     G + +  R  +       F        P SVDWR+KG VT VK+QGQCGSCWAFS   A+EG     T +L+SLSEQ LVDC     N+GCNGGLM+ AF++++  GG+ +E  YPY + + +C
Sbjct:   29 WTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGK------VFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESC 211          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 1.043e-30
Identity = 68/156 (43.59%), Postives = 92/156 (58.97%), Query Frame = 1
Query:  262 HVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            H  + ++    + + +N F DMTN EF     G + + HR  +       F    +  IP+SVDWR+KG +T VKDQGQCGSCWAFS   A+EG     T KL+SL+EQ LVDC     N+GCNGG M+  F ++++ GG+ +EA YPY     TC
Sbjct:    5 HNQEYSQGKHSFTMAMNAFGDMTNEEFRQVMNGFQYQKHRKGK------QFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYEGKVKTC 154          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.780e-30
Identity = 73/186 (39.25%), Postives = 101/186 (54.30%), Query Frame = 1
Query:  175 YERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGS-VTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            ++ W   H    S +E + R   F  N+  ++  N  +  +K+ LN+F+DM+  E    Y  S+ ++    +     GT  Y      P S+DWRKKG+ VT VK+QG CGSCW FST  A+E    I T KL  L+EQ+LVDC  + +N GC GGL   AFE+I+   G+  E  YPY   DG C
Sbjct:   35 FQSWMVQHQKKYSSEEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSEPQNCSATKSNYLRGTGPY------PPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGDC 214          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.035e-30
Identity = 73/196 (37.24%), Postives = 111/196 (56.63%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHTVSRSLDEKH-KRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*S-NQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L  EE   +L++ +++ +    S  ++H +RF  FK     +   N  +  YKL +N +AD++N EF +T    K+    +   T  +       + SIPS+VDWR +  VT VKDQG CGSCW F +  ++EG N +   +LVSLSEQ+LVDC   + +QGC GG    AF+++ + G + TE+ YPY   +G C
Sbjct:  215 LAKEEQASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEF-NTLVKPKVARPSV---TGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLC 406          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.762e-30
Identity = 73/192 (38.02%), Postives = 108/192 (56.25%), Query Frame = 1
Query:  169 DLYERW-RSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            DL+ +W R ++      D++H+R N++++NV H+ + N         Y L LN+F DMT  EF + Y     +   +      +G        ++P  +DWR+ G VT VKDQG CGSCWAFST   +EG         +S SEQ+LVDC     N GC+GGLME A++++ K+ G+ TE+ YPY + +G C
Sbjct:   19 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS----HGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYL-KQFGLETESSYPYTAVEGQC 204          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.968e-29
Identity = 75/178 (42.13%), Postives = 100/178 (56.18%), Query Frame = 1
Query:  211 SLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSI--PSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCDVS 735
            S++E  +RF +F  N+  +   N+    YKL +N+F D+T  EF     G+          T+GN      K+T++  P + DWRK G V+ VK QG+CGSCW FST  A+E        K +SLSEQ+LVDC    +N GCNGGL   AFE+IK  GG+ TE  YPY   +G C  S
Sbjct:   70 SVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGAS---QNCSATTKGNL-----KLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFS 239          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.570e-29
Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 1
Query:  436 IPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTCD 729
            +P S+DWR+ G+V  VK+QG CGSCWAFST+AAVEGIN I+T  L+SLSEQ+LVDC   +N GC GG M  AF+FI   GG+ +E  YPY   DG C+
Sbjct:    3 LPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTT-ANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICN 99          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.570e-29
Identity = 83/207 (40.10%), Postives = 110/207 (53.14%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVH--QTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDW--RKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDC-XH*SNQGCNGGLMELAFEFIKKKGGVTTEAK-YPYXSYDGTCDVS 735
            +E+  E    +LY  W+  +    +   DE + RF VF  N+ ++   Q +     Y L+LN+FADM+  EFASTY   ++        +  N  F Y       + VDW   KK    AVK+QG CGSCWAFS + A+E    I  NK   LSEQ+LVDC     N+GCNGG M+ AFE++   G    EAK YPY + DGTC  S
Sbjct:   14 QEVSDEIDTANLYANWKMKYNRRYTSQRDEMY-RFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLRVPKTAKLNASNAN--FQYKG-----AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADNG--LAEAKDYPYTAKDGTCKTS 210          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.356e-29
Identity = 75/200 (37.50%), Postives = 109/200 (54.50%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHH--TVSRSLDEKHKRFNVFKQNV----MHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L  EE L   +E W+  H    +  +DE  +R  ++++N+    +H  + +     Y+L +N   DMT+ E      G ++   R F           G+V   P S+D+RKKG VT VK+QGQCGSCWAFS+  A+EG     T KL++LS Q LVDC    N GC GG M  AF+++++ GG+ +E  YPY   D +C
Sbjct:   16 LSPEETLDTQWELWKKTHGKQYNSKVDEISRRL-IWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGRV---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVS-ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC 210          
BLAST of FC923648 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.765e-29
Identity = 75/200 (37.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query:  145 LESEEGLWDLYERWRSHHT--VSRSLDEKHKRFNVFKQNVMHVHQTNKMDK----PYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCXH*SNQGCNGGLMELAFEFIKKKGGVTTEAKYPYXSYDGTC 726
            L  EE L   +E W+  H    +  +DE  +R  ++++N+  +   N         Y+L +N   DMT+ E      G +I   R +           G+V   P S+D+RKKG VT VK+QGQCGSCWAFS+  A+EG     T KL++LS Q LVDC    N GC GG M  AF+++++ GG+ +E  YPY   D +C
Sbjct:   16 LSPEEMLDTQWELWKKTHQKQYNSKVDEISRRL-IWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSYSNDTLYTPEWEGRV---PDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVT-ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESC 210          
The following BLAST results are available for this feature:
BLAST of FC923648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CATL1_HUMAN7.988e-3137.57Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATL6_HUMAN1.043e-3043.59Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATH_BOVIN1.780e-3039.25Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CFAD_DICDI3.035e-3037.24Counting factor associated protein D OS=Dictyostel... [more]
CATLL_FASHE6.762e-3038.02Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CYSP3_SOLLC1.968e-2942.13Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CPGP2_ZINOF2.570e-2959.18Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CATL2_PARTE2.570e-2940.10Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATK_RAT3.356e-2937.50Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATK_MOUSE9.765e-2937.50Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC31707E01EF StrClemenN Citrus clementina cDNA clone C31707E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923648 ID=FC923648; Name=FC923648; organism=Citrus clementina; type=EST; length=735bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGNACACTGATCAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAACAACAGAGGCTAAGTACC
CTTACCNAAGCTATGATGGAACATGTGACGTTTCA
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